Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1QGJ

ARABIDOPSIS THALIANA PEROXIDASE N

Functional Information from GO Data
ChainGOidnamespacecontents
A0004601molecular_functionperoxidase activity
A0005576cellular_componentextracellular region
A0005634cellular_componentnucleus
A0005737cellular_componentcytoplasm
A0006979biological_processresponse to oxidative stress
A0020037molecular_functionheme binding
A0042744biological_processhydrogen peroxide catabolic process
A0046872molecular_functionmetal ion binding
A0098869biological_processcellular oxidant detoxification
A0140825molecular_functionlactoperoxidase activity
B0004601molecular_functionperoxidase activity
B0005576cellular_componentextracellular region
B0005634cellular_componentnucleus
B0005737cellular_componentcytoplasm
B0006979biological_processresponse to oxidative stress
B0020037molecular_functionheme binding
B0042744biological_processhydrogen peroxide catabolic process
B0046872molecular_functionmetal ion binding
B0098869biological_processcellular oxidant detoxification
B0140825molecular_functionlactoperoxidase activity
Functional Information from PDB Data
site_idAC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CA A 2001
ChainResidue
AASP43
AVAL46
AGLY48
AASP50
ASER52
AHOH2012

site_idAC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE CA A 2002
ChainResidue
ATHR223
AASP225
ATHR166
AASP217
ATHR220

site_idAC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CA B 2001
ChainResidue
BASP43
BVAL46
BGLY48
BASP50
BSER52
BHOH2335

site_idAC4
Number of Residues5
DetailsBINDING SITE FOR RESIDUE CA B 2002
ChainResidue
BTHR166
BASP217
BTHR220
BTHR223
BASP225

site_idAC5
Number of Residues24
DetailsBINDING SITE FOR RESIDUE HEM A 1350
ChainResidue
AARG31
AALA34
ASER35
AARG38
APHE41
ASER70
AARG72
APRO135
ASER136
APRO137
ALEU161
ASER162
AALA164
AHIS165
APHE167
AGLY168
AGLN169
AALA170
ALYS171
ASER241
AHOH2049
AHOH2065
AHOH2171
AHOH2525

site_idAC6
Number of Residues23
DetailsBINDING SITE FOR RESIDUE HEM B 1350
ChainResidue
BARG31
BALA34
BSER35
BARG38
BPHE41
BSER70
BARG72
BPRO135
BSER136
BPRO137
BLEU161
BSER162
BALA164
BHIS165
BPHE167
BGLY168
BGLN169
BALA170
BLYS171
BSER241
BHOH2023
BHOH2122
BHOH2530

site_idAC7
Number of Residues9
DetailsBINDING SITE FOR RESIDUE GSH A 1794
ChainResidue
AASN154
ATHR156
AASP157
ACYS275
AALA276
AARG279
BLYS27
BALA28
BHOH2292

site_idAC8
Number of Residues8
DetailsBINDING SITE FOR RESIDUE GSH B 1794
ChainResidue
BTHR156
BASP157
BCYS275
BALA276
BARG279
BHOH2177
BHOH2238
BHOH2322

Functional Information from PROSITE/UniProt
site_idPS00435
Number of Residues11
DetailsPEROXIDASE_1 Peroxidases proximal heme-ligand signature. DVVALSGAHTF
ChainResidueDetails
AASP157-PHE167

site_idPS00436
Number of Residues12
DetailsPEROXIDASE_2 Peroxidases active site signature. AAslIRLhFHDC
ChainResidueDetails
AALA33-CYS44

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsACT_SITE: Proton acceptor
ChainResidueDetails
AHIS42
BHIS42

site_idSWS_FT_FI2
Number of Residues20
DetailsBINDING: BINDING => ECO:0000255|PROSITE-ProRule:PRU00297, ECO:0000269|PubMed:10713531
ChainResidueDetails
AASP43
AASP225
BASP43
BVAL46
BGLY48
BASP50
BSER52
BTHR166
BASP217
BTHR220
BTHR223
AVAL46
BASP225
AGLY48
AASP50
ASER52
ATHR166
AASP217
ATHR220
ATHR223

site_idSWS_FT_FI3
Number of Residues2
DetailsBINDING:
ChainResidueDetails
APRO135
BPRO135

site_idSWS_FT_FI4
Number of Residues2
DetailsBINDING: axial binding residue
ChainResidueDetails
AHIS165
BHIS165

site_idSWS_FT_FI5
Number of Residues2
DetailsSITE: Transition state stabilizer
ChainResidueDetails
AARG38
BARG38

site_idSWS_FT_FI6
Number of Residues2
DetailsMOD_RES: Pyrrolidone carboxylic acid => ECO:0000250|UniProtKB:Q42578, ECO:0000255|PROSITE-ProRule:PRU00297
ChainResidueDetails
AGLN1
BGLN1

site_idSWS_FT_FI7
Number of Residues10
DetailsCARBOHYD: N-linked (GlcNAc...) asparagine => ECO:0000255
ChainResidueDetails
AASN154
BASN282
AASN181
AASN211
AASN253
AASN282
BASN154
BASN181
BASN211
BASN253

Catalytic Information from CSA
site_idCSA1
Number of Residues3
DetailsAnnotated By Reference To The Literature 1apx
ChainResidueDetails
AARG38
AHIS42
AALA71

site_idCSA2
Number of Residues3
DetailsAnnotated By Reference To The Literature 1apx
ChainResidueDetails
BARG38
BHIS42
BALA71

site_idCSA3
Number of Residues3
DetailsAnnotated By Reference To The Literature 1apx
ChainResidueDetails
AARG38
AHIS42
AASN67

site_idCSA4
Number of Residues3
DetailsAnnotated By Reference To The Literature 1apx
ChainResidueDetails
BARG38
BHIS42
BASN67

223790

PDB entries from 2024-08-14

PDB statisticsPDBj update infoContact PDBjnumon