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1Q3S

Crystal structure of the chaperonin from Thermococcus strain KS-1 (FormIII crystal complexed with ADP)

Functional Information from GO Data
ChainGOidnamespacecontents
A0005524molecular_functionATP binding
A0006457biological_processprotein folding
A0016887molecular_functionATP hydrolysis activity
A0051082molecular_functionunfolded protein binding
A0140662molecular_functionATP-dependent protein folding chaperone
B0005524molecular_functionATP binding
B0006457biological_processprotein folding
B0016887molecular_functionATP hydrolysis activity
B0051082molecular_functionunfolded protein binding
B0140662molecular_functionATP-dependent protein folding chaperone
C0005524molecular_functionATP binding
C0006457biological_processprotein folding
C0016887molecular_functionATP hydrolysis activity
C0051082molecular_functionunfolded protein binding
C0140662molecular_functionATP-dependent protein folding chaperone
D0005524molecular_functionATP binding
D0006457biological_processprotein folding
D0016887molecular_functionATP hydrolysis activity
D0051082molecular_functionunfolded protein binding
D0140662molecular_functionATP-dependent protein folding chaperone
E0005524molecular_functionATP binding
E0006457biological_processprotein folding
E0016887molecular_functionATP hydrolysis activity
E0051082molecular_functionunfolded protein binding
E0140662molecular_functionATP-dependent protein folding chaperone
F0005524molecular_functionATP binding
F0006457biological_processprotein folding
F0016887molecular_functionATP hydrolysis activity
F0051082molecular_functionunfolded protein binding
F0140662molecular_functionATP-dependent protein folding chaperone
G0005524molecular_functionATP binding
G0006457biological_processprotein folding
G0016887molecular_functionATP hydrolysis activity
G0051082molecular_functionunfolded protein binding
G0140662molecular_functionATP-dependent protein folding chaperone
H0005524molecular_functionATP binding
H0006457biological_processprotein folding
H0016887molecular_functionATP hydrolysis activity
H0051082molecular_functionunfolded protein binding
H0140662molecular_functionATP-dependent protein folding chaperone
Functional Information from PDB Data
site_idAC1
Number of Residues3
DetailsBINDING SITE FOR RESIDUE MG A 1527
ChainResidue
AASP95
ALYS165
AADP1528

site_idAC2
Number of Residues2
DetailsBINDING SITE FOR RESIDUE MG B 2527
ChainResidue
BASP95
BADP2528

site_idAC3
Number of Residues3
DetailsBINDING SITE FOR RESIDUE MG C 3527
ChainResidue
CASP95
CLYS165
CADP3528

site_idAC4
Number of Residues3
DetailsBINDING SITE FOR RESIDUE MG D 4527
ChainResidue
DLYS165
DADP4528
DASP95

site_idAC5
Number of Residues3
DetailsBINDING SITE FOR RESIDUE MG E 5527
ChainResidue
EASP95
ELYS165
EADP5528

site_idAC6
Number of Residues2
DetailsBINDING SITE FOR RESIDUE MG G 6527
ChainResidue
GASP95
GADP7528

site_idAC7
Number of Residues3
DetailsBINDING SITE FOR RESIDUE MG H 8527
ChainResidue
HASP95
HLYS165
HADP8528

site_idAC8
Number of Residues19
DetailsBINDING SITE FOR RESIDUE ADP A 1528
ChainResidue
ATHR42
AGLY44
APRO45
AASN63
AASP95
AGLY96
ATHR97
ATHR98
ATHR99
AGLY164
AALA410
AGLY411
ALEU451
AILE479
AASP480
AVAL481
APHE482
AGLU496
AMG1527

site_idAC9
Number of Residues20
DetailsBINDING SITE FOR RESIDUE ADP B 2528
ChainResidue
BTHR42
BLEU43
BGLY44
BPRO45
BASN63
BASP95
BGLY96
BTHR97
BTHR98
BTHR99
BGLY164
BALA410
BGLY411
BLEU451
BILE479
BASP480
BVAL481
BILE494
BGLU496
BMG2527

site_idBC1
Number of Residues21
DetailsBINDING SITE FOR RESIDUE ADP C 3528
ChainResidue
CTHR42
CLEU43
CGLY44
CPRO45
CASN63
CASP95
CGLY96
CTHR97
CTHR98
CTHR99
CGLY164
CALA410
CGLY411
CLEU451
CILE479
CASP480
CVAL481
CPHE482
CGLU496
CLYS501
CMG3527

site_idBC2
Number of Residues20
DetailsBINDING SITE FOR RESIDUE ADP D 4528
ChainResidue
DTHR42
DGLY44
DPRO45
DASN63
DASP95
DGLY96
DTHR97
DTHR98
DTHR99
DGLY164
DALA410
DGLY411
DLEU451
DILE479
DASP480
DVAL481
DPHE482
DILE494
DGLU496
DMG4527

site_idBC3
Number of Residues24
DetailsBINDING SITE FOR RESIDUE ADP E 5528
ChainResidue
ETHR42
ELEU43
EGLY44
EPRO45
EASN63
EASP95
EGLY96
ETHR97
ETHR98
ETHR99
EGLY164
EALA410
EGLY411
EGLY412
EILE447
ELEU451
EILE479
EASP480
EVAL481
EPHE482
EILE494
EGLU496
ELYS501
EMG5527

site_idBC4
Number of Residues20
DetailsBINDING SITE FOR RESIDUE ADP F 6528
ChainResidue
FTHR42
FLEU43
FGLY44
FPRO45
FASN63
FASP95
FGLY96
FTHR97
FTHR98
FTHR99
FGLY164
FALA410
FGLY411
FLEU451
FILE479
FASP480
FVAL481
FPHE482
FGLU496
FLYS501

site_idBC5
Number of Residues22
DetailsBINDING SITE FOR RESIDUE ADP G 7528
ChainResidue
GTHR42
GLEU43
GGLY44
GPRO45
GASN63
GASP95
GGLY96
GTHR97
GTHR98
GTHR99
GGLY164
GALA410
GGLY411
GILE447
GLEU451
GILE479
GASP480
GVAL481
GPHE482
GILE494
GGLU496
GMG6527

site_idBC6
Number of Residues22
DetailsBINDING SITE FOR RESIDUE ADP H 8528
ChainResidue
HTHR42
HLEU43
HGLY44
HPRO45
HASN63
HASP95
HGLY96
HTHR97
HTHR98
HTHR99
HGLY164
HALA410
HGLY411
HILE447
HLEU451
HILE479
HASP480
HVAL481
HPHE482
HILE494
HGLU496
HMG8527

Functional Information from PROSITE/UniProt
site_idPS00750
Number of Residues13
DetailsTCP1_1 Chaperonins TCP-1 signature 1. RTtLGPkGmdKML
ChainResidueDetails
AARG40-LEU52

site_idPS00995
Number of Residues9
DetailsTCP1_3 Chaperonins TCP-1 signature 3. QDkeAGDGT
ChainResidueDetails
AGLN89-THR97

Catalytic Information from CSA
site_idCSA1
Number of Residues4
DetailsAnnotated By Reference To The Literature 1q3q
ChainResidueDetails
ATHR98
ATHR97
AASP64
AASP393

site_idCSA2
Number of Residues4
DetailsAnnotated By Reference To The Literature 1q3q
ChainResidueDetails
BTHR98
BTHR97
BASP64
BASP393

site_idCSA3
Number of Residues4
DetailsAnnotated By Reference To The Literature 1q3q
ChainResidueDetails
CTHR98
CTHR97
CASP64
CASP393

site_idCSA4
Number of Residues4
DetailsAnnotated By Reference To The Literature 1q3q
ChainResidueDetails
DTHR98
DTHR97
DASP64
DASP393

site_idCSA5
Number of Residues4
DetailsAnnotated By Reference To The Literature 1q3q
ChainResidueDetails
ETHR98
ETHR97
EASP64
EASP393

site_idCSA6
Number of Residues4
DetailsAnnotated By Reference To The Literature 1q3q
ChainResidueDetails
FTHR98
FTHR97
FASP64
FASP393

site_idCSA7
Number of Residues4
DetailsAnnotated By Reference To The Literature 1q3q
ChainResidueDetails
GTHR98
GTHR97
GASP64
GASP393

site_idCSA8
Number of Residues4
DetailsAnnotated By Reference To The Literature 1q3q
ChainResidueDetails
HTHR98
HTHR97
HASP64
HASP393

site_idMCSA1
Number of Residues4
DetailsM-CSA 179
ChainResidueDetails
AASP64electrostatic stabiliser, hydrogen bond acceptor
ATHR97electrostatic stabiliser, hydrogen bond donor
ATHR98electrostatic stabiliser, hydrogen bond donor
AASP393hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor

site_idMCSA2
Number of Residues4
DetailsM-CSA 179
ChainResidueDetails
BASP64electrostatic stabiliser, hydrogen bond acceptor
BTHR97electrostatic stabiliser, hydrogen bond donor
BTHR98electrostatic stabiliser, hydrogen bond donor
BASP393hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor

site_idMCSA3
Number of Residues4
DetailsM-CSA 179
ChainResidueDetails
CASP64electrostatic stabiliser, hydrogen bond acceptor
CTHR97electrostatic stabiliser, hydrogen bond donor
CTHR98electrostatic stabiliser, hydrogen bond donor
CASP393hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor

site_idMCSA4
Number of Residues4
DetailsM-CSA 179
ChainResidueDetails
DASP64electrostatic stabiliser, hydrogen bond acceptor
DTHR97electrostatic stabiliser, hydrogen bond donor
DTHR98electrostatic stabiliser, hydrogen bond donor
DASP393hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor

site_idMCSA5
Number of Residues4
DetailsM-CSA 179
ChainResidueDetails
EASP64electrostatic stabiliser, hydrogen bond acceptor
ETHR97electrostatic stabiliser, hydrogen bond donor
ETHR98electrostatic stabiliser, hydrogen bond donor
EASP393hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor

site_idMCSA6
Number of Residues4
DetailsM-CSA 179
ChainResidueDetails
FASP64electrostatic stabiliser, hydrogen bond acceptor
FTHR97electrostatic stabiliser, hydrogen bond donor
FTHR98electrostatic stabiliser, hydrogen bond donor
FASP393hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor

site_idMCSA7
Number of Residues4
DetailsM-CSA 179
ChainResidueDetails
GASP64electrostatic stabiliser, hydrogen bond acceptor
GTHR97electrostatic stabiliser, hydrogen bond donor
GTHR98electrostatic stabiliser, hydrogen bond donor
GASP393hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor

site_idMCSA8
Number of Residues4
DetailsM-CSA 179
ChainResidueDetails
HASP64electrostatic stabiliser, hydrogen bond acceptor
HTHR97electrostatic stabiliser, hydrogen bond donor
HTHR98electrostatic stabiliser, hydrogen bond donor
HASP393hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor

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PDB entries from 2024-07-31

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