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1PQ5

Trypsin at pH 5, 0.85 A

Functional Information from GO Data
ChainGOidnamespacecontents
A0004252molecular_functionserine-type endopeptidase activity
A0005576cellular_componentextracellular region
A0006508biological_processproteolysis
A0008236molecular_functionserine-type peptidase activity
Functional Information from PDB Data
site_idAC1
Number of Residues9
DetailsBINDING SITE FOR RESIDUE SO4 A 601
ChainResidue
AARG88
ASER184
ASER185
AHOH852
AHOH878
AHOH895
AHOH896
AHOH961
AHOH1063

site_idAC2
Number of Residues9
DetailsBINDING SITE FOR RESIDUE SO4 A 602
ChainResidue
AARG119
AALA122
AASN220
AARG232
AHOH804
AHOH805
AHOH937
AHOH979
AHOH980

site_idAC3
Number of Residues10
DetailsBINDING SITE FOR RESIDUE SO4 A 603
ChainResidue
AGLN63
AGLY112
AGLY113
AHOH776
AHOH842
AHOH921
AHOH1115
AHOH1132
AHOH1151
AHOH1165

site_idAC4
Number of Residues18
DetailsBINDING SITE FOR RESIDUE ARG A 703
ChainResidue
AHIS56
AASP189
ASER190
ACYS191
AGLN192
AGLY193
AASP194
ASER195
AVAL210
ASER211
AGLY215
AGLY223
AHOH704
AHOH705
AHOH802
AHOH827
AHOH837
AHOH884

Functional Information from PROSITE/UniProt
site_idPS00134
Number of Residues6
DetailsTRYPSIN_HIS Serine proteases, trypsin family, histidine active site. LTAAHC
ChainResidueDetails
ALEU52-CYS57

site_idPS00135
Number of Residues12
DetailsTRYPSIN_SER Serine proteases, trypsin family, serine active site. DScqGDSGGPIV
ChainResidueDetails
AASP189-VAL200

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues3
DetailsACT_SITE: Charge relay system
ChainResidueDetails
AHIS56
AASP99
ASER195

site_idSWS_FT_FI2
Number of Residues1
DetailsSITE: Required for specificity
ChainResidueDetails
AASP189

Catalytic Information from CSA
site_idCSA1
Number of Residues2
DetailsAnnotated By Reference To The Literature 1a0j
ChainResidueDetails
AHIS56
AASP99

site_idCSA2
Number of Residues2
DetailsAnnotated By Reference To The Literature 1a0j
ChainResidueDetails
ASER195
AGLY196

site_idCSA3
Number of Residues2
DetailsAnnotated By Reference To The Literature 1a0j
ChainResidueDetails
ASER195
AGLY193

site_idCSA4
Number of Residues3
DetailsAnnotated By Reference To The Literature 1a0j
ChainResidueDetails
ASER195
AHIS56
AASP99

site_idCSA5
Number of Residues4
DetailsAnnotated By Reference To The Literature 1a0j
ChainResidueDetails
ASER195
AGLY193
AHIS56
AASP99

site_idCSA6
Number of Residues4
DetailsAnnotated By Reference To The Literature 1a0j
ChainResidueDetails
ASER195
AHIS56
AASP99
AGLY196

site_idCSA7
Number of Residues5
DetailsAnnotated By Reference To The Literature 1a0j
ChainResidueDetails
ASER195
ASER211
AGLY193
AHIS56
AASP99

site_idMCSA1
Number of Residues6
DetailsM-CSA 173
ChainResidueDetails
AHIS56hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor
AASP99activator, electrostatic stabiliser, hydrogen bond acceptor
AGLN192electrostatic stabiliser, hydrogen bond donor, transition state stabiliser
AGLY193electrostatic stabiliser, hydrogen bond donor, transition state stabiliser
AASP194electrostatic stabiliser, hydrogen bond donor, transition state stabiliser
ASER195electrostatic stabiliser, transition state stabiliser

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PDB entries from 2024-10-30

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