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1PKL

THE STRUCTURE OF LEISHMANIA PYRUVATE KINASE

Functional Information from GO Data
ChainGOidnamespacecontents
A0000287molecular_functionmagnesium ion binding
A0003824molecular_functioncatalytic activity
A0004743molecular_functionpyruvate kinase activity
A0005524molecular_functionATP binding
A0005737cellular_componentcytoplasm
A0006096biological_processglycolytic process
A0016301molecular_functionkinase activity
A0030955molecular_functionpotassium ion binding
A0032869biological_processcellular response to insulin stimulus
A0046872molecular_functionmetal ion binding
B0000287molecular_functionmagnesium ion binding
B0003824molecular_functioncatalytic activity
B0004743molecular_functionpyruvate kinase activity
B0005524molecular_functionATP binding
B0005737cellular_componentcytoplasm
B0006096biological_processglycolytic process
B0016301molecular_functionkinase activity
B0030955molecular_functionpotassium ion binding
B0032869biological_processcellular response to insulin stimulus
B0046872molecular_functionmetal ion binding
C0000287molecular_functionmagnesium ion binding
C0003824molecular_functioncatalytic activity
C0004743molecular_functionpyruvate kinase activity
C0005524molecular_functionATP binding
C0005737cellular_componentcytoplasm
C0006096biological_processglycolytic process
C0016301molecular_functionkinase activity
C0030955molecular_functionpotassium ion binding
C0032869biological_processcellular response to insulin stimulus
C0046872molecular_functionmetal ion binding
D0000287molecular_functionmagnesium ion binding
D0003824molecular_functioncatalytic activity
D0004743molecular_functionpyruvate kinase activity
D0005524molecular_functionATP binding
D0005737cellular_componentcytoplasm
D0006096biological_processglycolytic process
D0016301molecular_functionkinase activity
D0030955molecular_functionpotassium ion binding
D0032869biological_processcellular response to insulin stimulus
D0046872molecular_functionmetal ion binding
E0000287molecular_functionmagnesium ion binding
E0003824molecular_functioncatalytic activity
E0004743molecular_functionpyruvate kinase activity
E0005524molecular_functionATP binding
E0005737cellular_componentcytoplasm
E0006096biological_processglycolytic process
E0016301molecular_functionkinase activity
E0030955molecular_functionpotassium ion binding
E0032869biological_processcellular response to insulin stimulus
E0046872molecular_functionmetal ion binding
F0000287molecular_functionmagnesium ion binding
F0003824molecular_functioncatalytic activity
F0004743molecular_functionpyruvate kinase activity
F0005524molecular_functionATP binding
F0005737cellular_componentcytoplasm
F0006096biological_processglycolytic process
F0016301molecular_functionkinase activity
F0030955molecular_functionpotassium ion binding
F0032869biological_processcellular response to insulin stimulus
F0046872molecular_functionmetal ion binding
G0000287molecular_functionmagnesium ion binding
G0003824molecular_functioncatalytic activity
G0004743molecular_functionpyruvate kinase activity
G0005524molecular_functionATP binding
G0005737cellular_componentcytoplasm
G0006096biological_processglycolytic process
G0016301molecular_functionkinase activity
G0030955molecular_functionpotassium ion binding
G0032869biological_processcellular response to insulin stimulus
G0046872molecular_functionmetal ion binding
H0000287molecular_functionmagnesium ion binding
H0003824molecular_functioncatalytic activity
H0004743molecular_functionpyruvate kinase activity
H0005524molecular_functionATP binding
H0005737cellular_componentcytoplasm
H0006096biological_processglycolytic process
H0016301molecular_functionkinase activity
H0030955molecular_functionpotassium ion binding
H0032869biological_processcellular response to insulin stimulus
H0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE SO4 A 3000
ChainResidue
ASER400
AASN401
ATHR402
AARG404
ASER405
AHOH3237

site_idAC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE SO4 B 3001
ChainResidue
BSER400
BASN401
BTHR402
BGLY403
BARG404
BSER405

site_idAC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE SO4 C 3002
ChainResidue
CSER400
CASN401
CTHR402
CARG404
CSER405
CALA481

site_idAC4
Number of Residues6
DetailsBINDING SITE FOR RESIDUE SO4 D 3003
ChainResidue
DSER400
DASN401
DTHR402
DGLY403
DARG404
DSER405

site_idAC5
Number of Residues7
DetailsBINDING SITE FOR RESIDUE SO4 E 3004
ChainResidue
ESER400
EASN401
ETHR402
EARG404
ESER405
EALA481
EHOH1541

site_idAC6
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 F 3005
ChainResidue
FSER400
FASN401
FTHR402
FARG404
FSER405

site_idAC7
Number of Residues7
DetailsBINDING SITE FOR RESIDUE SO4 H 3006
ChainResidue
HSER400
HASN401
HTHR402
HGLY403
HARG404
HSER405
HALA481

site_idAC8
Number of Residues9
DetailsBINDING SITE FOR RESIDUE SO4 G 3007
ChainResidue
GSER400
GTHR402
GARG404
GSER405
GALA481
GASP482
GHOH2654
GHOH2773
GHOH2900

site_idADP
Number of Residues5
DetailsADP SUBSTRATE BINDING SITE, BY ANALOGY WITH OTHER CRYSTAL STRUCTURES
ChainResidue
AARG49
AASN51
AHIS54
AARG90
AARG174

site_idALL
Number of Residues7
DetailsPUTATIVE ALLOSTERIC EFFECTOR SITE, PARTLY BY ANALOGY WITH OTHER CRYSTAL STRUCTURES
ChainResidue
ASER400
ATHR402
AARG404
ASER405
ALYS453
AARG456
AHIS480

site_idDIV
Number of Residues2
DetailsDIVALENT CATION BINDING SITE, BY ANALOGY WITH OTHER CRYSTAL STRUCTURES
ChainResidue
AGLU240
AASP264

site_idMON
Number of Residues4
DetailsMONOVALENT CATION BINDING SITE, BY ANALOGY WITH OTHER CRYSTAL STRUCTURES
ChainResidue
AASN51
ASER53
AASP83
ATHR84

site_idPEP
Number of Residues4
DetailsPEP SUBSTRATE BINDING SITE, BY ANALOGY WITH OTHER CRYSTAL STRUCTURES
ChainResidue
AARG49
AARG90
ALYS238
ATHR296

Functional Information from PROSITE/UniProt
site_idPS00110
Number of Residues13
DetailsPYRUVATE_KINASE Pyruvate kinase active site signature. ImIICKIENhQGV
ChainResidueDetails
AILE233-VAL245

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues72
DetailsBINDING: BINDING => ECO:0000250
ChainResidueDetails
AARG49
BARG49
BASN51
BSER53
BASP83
BTHR84
BGLU240
BGLY263
BASP264
BTHR296
CARG49
AASN51
CASN51
CSER53
CASP83
CTHR84
CGLU240
CGLY263
CASP264
CTHR296
DARG49
DASN51
ASER53
DSER53
DASP83
DTHR84
DGLU240
DGLY263
DASP264
DTHR296
EARG49
EASN51
ESER53
AASP83
EASP83
ETHR84
EGLU240
EGLY263
EASP264
ETHR296
FARG49
FASN51
FSER53
FASP83
ATHR84
FTHR84
FGLU240
FGLY263
FASP264
FTHR296
HARG49
HASN51
HSER53
HASP83
HTHR84
AGLU240
HGLU240
HGLY263
HASP264
HTHR296
GARG49
GASN51
GSER53
GASP83
GTHR84
GGLU240
AGLY263
GGLY263
GASP264
GTHR296
AASP264
ATHR296

site_idSWS_FT_FI2
Number of Residues8
DetailsBINDING: BINDING => ECO:0000250|UniProtKB:P14618
ChainResidueDetails
AARG90
BARG90
CARG90
DARG90
EARG90
FARG90
HARG90
GARG90

site_idSWS_FT_FI3
Number of Residues8
DetailsSITE: Transition state stabilizer
ChainResidueDetails
ALYS238
BLYS238
CLYS238
DLYS238
ELYS238
FLYS238
HLYS238
GLYS238

Catalytic Information from CSA
site_idCSA1
Number of Residues6
DetailsAnnotated By Reference To The Literature 1pkn
ChainResidueDetails
AARG90
ALYS238
AARG49
ATHR296
AGLU332
ASER330

site_idCSA2
Number of Residues6
DetailsAnnotated By Reference To The Literature 1pkn
ChainResidueDetails
BARG90
BLYS238
BARG49
BTHR296
BGLU332
BSER330

site_idCSA3
Number of Residues6
DetailsAnnotated By Reference To The Literature 1pkn
ChainResidueDetails
CARG90
CLYS238
CARG49
CTHR296
CGLU332
CSER330

site_idCSA4
Number of Residues6
DetailsAnnotated By Reference To The Literature 1pkn
ChainResidueDetails
DARG90
DLYS238
DARG49
DTHR296
DGLU332
DSER330

site_idCSA5
Number of Residues6
DetailsAnnotated By Reference To The Literature 1pkn
ChainResidueDetails
EARG90
ELYS238
EARG49
ETHR296
EGLU332
ESER330

site_idCSA6
Number of Residues6
DetailsAnnotated By Reference To The Literature 1pkn
ChainResidueDetails
FARG90
FLYS238
FARG49
FTHR296
FGLU332
FSER330

site_idCSA7
Number of Residues6
DetailsAnnotated By Reference To The Literature 1pkn
ChainResidueDetails
HARG90
HLYS238
HARG49
HTHR296
HGLU332
HSER330

site_idCSA8
Number of Residues6
DetailsAnnotated By Reference To The Literature 1pkn
ChainResidueDetails
GARG90
GLYS238
GARG49
GTHR296
GGLU332
GSER330

219515

PDB entries from 2024-05-08

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