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1PFF

Crystal Structure of Homocysteine alpha-, gamma-lyase at 1.8 Angstroms

Functional Information from GO Data
ChainGOidnamespacecontents
A0019346biological_processtranssulfuration
A0030170molecular_functionpyridoxal phosphate binding
B0019346biological_processtranssulfuration
B0030170molecular_functionpyridoxal phosphate binding
Functional Information from PDB Data
site_idAC1
Number of Residues3
DetailsBINDING SITE FOR RESIDUE EDO A 1001
ChainResidue
AGLY101
AGLU128
APEG1502

site_idAC2
Number of Residues2
DetailsBINDING SITE FOR RESIDUE EDO A 1002
ChainResidue
AALA66
AHOH1625

site_idAC3
Number of Residues2
DetailsBINDING SITE FOR RESIDUE EDO A 1003
ChainResidue
AEDO1008
BASP197

site_idAC4
Number of Residues2
DetailsBINDING SITE FOR RESIDUE EDO A 1004
ChainResidue
AHIS143
AASP318

site_idAC5
Number of Residues8
DetailsBINDING SITE FOR RESIDUE EDO A 1005
ChainResidue
ALEU144
APRO146
AHIS279
ALYS285
AEDO1006
AEDO1007
AHOH1528
AHOH1540

site_idAC6
Number of Residues4
DetailsBINDING SITE FOR RESIDUE EDO A 1006
ChainResidue
AGLU280
ALYS282
AEDO1005
AEDO1007

site_idAC7
Number of Residues8
DetailsBINDING SITE FOR RESIDUE EDO A 1007
ChainResidue
ALEU278
AHIS279
AHIS281
AVAL284
ALYS285
AVAL287
AEDO1005
AEDO1006

site_idAC8
Number of Residues4
DetailsBINDING SITE FOR RESIDUE EDO A 1008
ChainResidue
AEDO1003
APEG1502
BGLU167
BLEU198

site_idAC9
Number of Residues3
DetailsBINDING SITE FOR RESIDUE EDO B 1009
ChainResidue
BASP108
BCYS109
BALA365

site_idBC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE EDO B 1010
ChainResidue
BHIS279
BGLU280
BGLN382
BASP386

site_idBC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE EDO B 1011
ChainResidue
BLEU74
BHIS76
BPRO190
BGLU321
BHOH1618

site_idBC3
Number of Residues2
DetailsBINDING SITE FOR RESIDUE EDO B 1012
ChainResidue
AGLU280
BASP318

site_idBC4
Number of Residues3
DetailsBINDING SITE FOR RESIDUE EDO A 1013
ChainResidue
AGLN235
AEDO1015
BHOH1567

site_idBC5
Number of Residues6
DetailsBINDING SITE FOR RESIDUE EDO A 1014
ChainResidue
ALEU74
AHOH1510
AHOH1544
BGLU379
BASN380
BASP383

site_idBC6
Number of Residues4
DetailsBINDING SITE FOR RESIDUE EDO A 1015
ChainResidue
ALYS231
AEDO1013
BGLN176
BHOH1567

site_idBC7
Number of Residues2
DetailsBINDING SITE FOR RESIDUE EDO A 1016
ChainResidue
ALYS231
AHOH1671

site_idBC8
Number of Residues4
DetailsBINDING SITE FOR RESIDUE EDO A 1017
ChainResidue
AARG123
AGLU128
AVAL129
AHOH1627

site_idBC9
Number of Residues4
DetailsBINDING SITE FOR RESIDUE EDO A 1018
ChainResidue
ACYS109
ATHR160
ALYS175
AGLY366

site_idCC1
Number of Residues8
DetailsBINDING SITE FOR RESIDUE EDO A 1019
ChainResidue
ATHR160
ALYS162
ALYS175
APRO296
AHOH1512
AHOH1521
AHOH1533
AHOH1570

site_idCC2
Number of Residues3
DetailsBINDING SITE FOR RESIDUE EDO A 1020
ChainResidue
AILE90
ATYR111
AASP184

site_idCC3
Number of Residues3
DetailsBINDING SITE FOR RESIDUE EDO A 1021
ChainResidue
AALA336
AVAL337
ASER338

site_idCC4
Number of Residues8
DetailsBINDING SITE FOR RESIDUE PEG B 1500
ChainResidue
ALYS273
BLEU192
BLYS302
BLYS303
BGLN304
BMET305
BLYS306
BHOH1545

site_idCC5
Number of Residues13
DetailsBINDING SITE FOR RESIDUE PEG B 1501
ChainResidue
BVAL218
BILE244
BILE245
BSER246
BASP249
BHOH1543
AALA84
AVAL218
AILE244
AILE245
ASER246
AHOH1568
BALA84

site_idCC6
Number of Residues5
DetailsBINDING SITE FOR RESIDUE PEG A 1502
ChainResidue
AARG149
AEDO1001
AEDO1008
AHOH1691
BARG174

Catalytic Information from CSA
site_idCSA1
Number of Residues2
DetailsAnnotated By Reference To The Literature 1ay4
ChainResidueDetails
ATYR111
AASP184

site_idCSA2
Number of Residues2
DetailsAnnotated By Reference To The Literature 1ay4
ChainResidueDetails
BTYR111
BASP184

site_idCSA3
Number of Residues3
DetailsAnnotated By Reference To The Literature 1ay4
ChainResidueDetails
ATYR111
ALYS209
AASP184

site_idCSA4
Number of Residues3
DetailsAnnotated By Reference To The Literature 1ay4
ChainResidueDetails
BTYR111
BLYS209
BASP184

238895

PDB entries from 2025-07-16

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