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1PDL

Fitting of gp5 in the cryoEM reconstruction of the bacteriophage T4 baseplate

Functional Information from GO Data
ChainGOidnamespacecontents
A0003796molecular_functionlysozyme activity
A0005515molecular_functionprotein binding
A0009253biological_processpeptidoglycan catabolic process
A0016798molecular_functionhydrolase activity, acting on glycosyl bonds
A0016998biological_processcell wall macromolecule catabolic process
A0031640biological_processkilling of cells of another organism
A0042742biological_processdefense response to bacterium
A0042802molecular_functionidentical protein binding
A0044409biological_processsymbiont entry into host
A0046718biological_processsymbiont entry into host cell
A0098003biological_processviral tail assembly
A0098015cellular_componentvirus tail
A0098025cellular_componentvirus tail, baseplate
A0098932biological_processsymbiont entry into host cell via disruption of host cell wall peptidoglycan
A0098994biological_processsymbiont entry into host cell via disruption of host cell envelope
B0003796molecular_functionlysozyme activity
B0005515molecular_functionprotein binding
B0009253biological_processpeptidoglycan catabolic process
B0016798molecular_functionhydrolase activity, acting on glycosyl bonds
B0016998biological_processcell wall macromolecule catabolic process
B0031640biological_processkilling of cells of another organism
B0042742biological_processdefense response to bacterium
B0042802molecular_functionidentical protein binding
B0044409biological_processsymbiont entry into host
B0046718biological_processsymbiont entry into host cell
B0098003biological_processviral tail assembly
B0098015cellular_componentvirus tail
B0098025cellular_componentvirus tail, baseplate
B0098932biological_processsymbiont entry into host cell via disruption of host cell wall peptidoglycan
B0098994biological_processsymbiont entry into host cell via disruption of host cell envelope
C0003796molecular_functionlysozyme activity
C0005515molecular_functionprotein binding
C0009253biological_processpeptidoglycan catabolic process
C0016798molecular_functionhydrolase activity, acting on glycosyl bonds
C0016998biological_processcell wall macromolecule catabolic process
C0031640biological_processkilling of cells of another organism
C0042742biological_processdefense response to bacterium
C0042802molecular_functionidentical protein binding
C0044409biological_processsymbiont entry into host
C0046718biological_processsymbiont entry into host cell
C0098003biological_processviral tail assembly
C0098015cellular_componentvirus tail
C0098025cellular_componentvirus tail, baseplate
C0098932biological_processsymbiont entry into host cell via disruption of host cell wall peptidoglycan
C0098994biological_processsymbiont entry into host cell via disruption of host cell envelope
Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues3
DetailsACT_SITE: Proton donor => ECO:0000255|HAMAP-Rule:MF_04151, ECO:0000305|PubMed:11823865
ChainResidueDetails
AGLU184
BGLU184
CGLU184

site_idSWS_FT_FI2
Number of Residues3
DetailsACT_SITE: Nucleophile => ECO:0000255|HAMAP-Rule:MF_04151, ECO:0000305|PubMed:11823865
ChainResidueDetails
AASP193
BASP193
CASP193

site_idSWS_FT_FI3
Number of Residues3
DetailsSITE: Cleavage => ECO:0000255|HAMAP-Rule:MF_04151, ECO:0000269|PubMed:10217762, ECO:0000269|PubMed:15701513
ChainResidueDetails
ASER351
BSER351
CSER351

Catalytic Information from CSA
site_idCSA1
Number of Residues2
DetailsAnnotated By Reference To The Literature 206l
ChainResidueDetails
AASP193
AGLU184

site_idCSA2
Number of Residues2
DetailsAnnotated By Reference To The Literature 206l
ChainResidueDetails
BASP193
BGLU184

site_idCSA3
Number of Residues2
DetailsAnnotated By Reference To The Literature 206l
ChainResidueDetails
CASP193
CGLU184

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PDB entries from 2024-07-24

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