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1PBQ

CRYSTAL STRUCTURE OF THE NR1 LIGAND BINDING CORE IN COMPLEX WITH 5,7-DICHLOROKYNURENIC ACID (DCKA) AT 1.90 ANGSTROMS RESOLUTION

Functional Information from GO Data
ChainGOidnamespacecontents
A0015276molecular_functionligand-gated monoatomic ion channel activity
A0016020cellular_componentmembrane
B0015276molecular_functionligand-gated monoatomic ion channel activity
B0016020cellular_componentmembrane
Functional Information from PDB Data
site_idAC1
Number of Residues14
DetailsBINDING SITE FOR RESIDUE DK1 A 1001
ChainResidue
AGLN13
AHOH1036
AHOH1047
AHOH1078
AHOH1092
AHOH1111
APHE16
APHE92
APRO124
ALEU125
ATHR126
AARG131
ATRP223
APHE250

site_idAC2
Number of Residues13
DetailsBINDING SITE FOR RESIDUE DK1 B 1002
ChainResidue
BPHE16
BPHE92
BPRO124
BLEU125
BTHR126
BARG131
BTRP223
BASP224
BHOH1016
BHOH1029
BHOH1053
BHOH1086
BHOH1184

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues72
DetailsTRANSMEM: Helical => ECO:0000269|PubMed:24876489
ChainResidueDetails
ASER168-GLN188
AVAL239-ARG255
BSER168-GLN188
BVAL239-ARG255

site_idSWS_FT_FI2
Number of Residues52
DetailsTOPO_DOM: Cytoplasmic => ECO:0000269|PubMed:24876489
ChainResidueDetails
AVAL189-ILE210
ASER233-LEU238
BVAL189-ILE210
BSER233-LEU238

site_idSWS_FT_FI3
Number of Residues42
DetailsINTRAMEM: Discontinuously helical => ECO:0000250|UniProtKB:A0A1L8F5J9
ChainResidueDetails
AGLN211-ALA232
BGLN211-ALA232

site_idSWS_FT_FI4
Number of Residues2
DetailsBINDING: BINDING => ECO:0000269|PubMed:24876489, ECO:0007744|PDB:1PB7, ECO:0007744|PDB:2A5T, ECO:0007744|PDB:4NF5, ECO:0007744|PDB:4NF6, ECO:0007744|PDB:4NF8, ECO:0007744|PDB:4PE5, ECO:0007744|PDB:5DEX, ECO:0007744|PDB:5I56, ECO:0007744|PDB:5I57, ECO:0007744|PDB:5I58, ECO:0007744|PDB:5I59, ECO:0007744|PDB:5U8C, ECO:0007744|PDB:5VIH, ECO:0007744|PDB:5VII, ECO:0007744|PDB:5VIJ
ChainResidueDetails
APRO124
BPRO124

site_idSWS_FT_FI5
Number of Residues6
DetailsBINDING: BINDING => ECO:0000269|PubMed:16281028, ECO:0000269|PubMed:24876489, ECO:0007744|PDB:1PB7, ECO:0007744|PDB:2A5T, ECO:0007744|PDB:4NF5, ECO:0007744|PDB:4NF6, ECO:0007744|PDB:4NF8, ECO:0007744|PDB:4PE5, ECO:0007744|PDB:5DEX, ECO:0007744|PDB:5I56, ECO:0007744|PDB:5I57, ECO:0007744|PDB:5I58, ECO:0007744|PDB:5I59, ECO:0007744|PDB:5U8C, ECO:0007744|PDB:5VIH, ECO:0007744|PDB:5VII, ECO:0007744|PDB:5VIJ
ChainResidueDetails
AARG131
ASER180
AASP224
BARG131

site_idSWS_FT_FI6
Number of Residues2
DetailsCARBOHYD: N-linked (GlcNAc...) asparagine => ECO:0000269|PubMed:24876489, ECO:0007744|PDB:4PE5, ECO:0007744|PubMed:24090084
ChainResidueDetails
AASN48
BASN48

site_idSWS_FT_FI7
Number of Residues6
DetailsCARBOHYD: N-linked (GlcNAc...) asparagine => ECO:0000255
ChainResidueDetails
AASN79
AASN99
AASN166
BASN79
BASN99
BLYS282

site_idSWS_FT_FI8
Number of Residues2
DetailsCARBOHYD: N-linked (GlcNAc...) asparagine => ECO:0007744|PubMed:24090084
ChainResidueDetails
AASN263

222624

PDB entries from 2024-07-17

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