Summary Structural details Experimental details Functional details Sequence Neighbor History Downloads

1P7G

Crystal structure of superoxide dismutase from Pyrobaculum aerophilum

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0004784	molecular_function	superoxide dismutase activity
A	0006801	biological_process	superoxide metabolic process
A	0016491	molecular_function	oxidoreductase activity
A	0019430	biological_process	removal of superoxide radicals
A	0046872	molecular_function	metal ion binding
B	0004784	molecular_function	superoxide dismutase activity
B	0006801	biological_process	superoxide metabolic process
B	0016491	molecular_function	oxidoreductase activity
B	0019430	biological_process	removal of superoxide radicals
B	0046872	molecular_function	metal ion binding
C	0004784	molecular_function	superoxide dismutase activity
C	0006801	biological_process	superoxide metabolic process
C	0016491	molecular_function	oxidoreductase activity
C	0019430	biological_process	removal of superoxide radicals
C	0046872	molecular_function	metal ion binding
D	0004784	molecular_function	superoxide dismutase activity
D	0006801	biological_process	superoxide metabolic process
D	0016491	molecular_function	oxidoreductase activity
D	0019430	biological_process	removal of superoxide radicals
D	0046872	molecular_function	metal ion binding
E	0004784	molecular_function	superoxide dismutase activity
E	0006801	biological_process	superoxide metabolic process
E	0016491	molecular_function	oxidoreductase activity
E	0019430	biological_process	removal of superoxide radicals
E	0046872	molecular_function	metal ion binding
F	0004784	molecular_function	superoxide dismutase activity
F	0006801	biological_process	superoxide metabolic process
F	0016491	molecular_function	oxidoreductase activity
F	0019430	biological_process	removal of superoxide radicals
F	0046872	molecular_function	metal ion binding
G	0004784	molecular_function	superoxide dismutase activity
G	0006801	biological_process	superoxide metabolic process
G	0016491	molecular_function	oxidoreductase activity
G	0019430	biological_process	removal of superoxide radicals
G	0046872	molecular_function	metal ion binding
H	0004784	molecular_function	superoxide dismutase activity
H	0006801	biological_process	superoxide metabolic process
H	0016491	molecular_function	oxidoreductase activity
H	0019430	biological_process	removal of superoxide radicals
H	0046872	molecular_function	metal ion binding
I	0004784	molecular_function	superoxide dismutase activity
I	0006801	biological_process	superoxide metabolic process
I	0016491	molecular_function	oxidoreductase activity
I	0019430	biological_process	removal of superoxide radicals
I	0046872	molecular_function	metal ion binding
J	0004784	molecular_function	superoxide dismutase activity
J	0006801	biological_process	superoxide metabolic process
J	0016491	molecular_function	oxidoreductase activity
J	0019430	biological_process	removal of superoxide radicals
J	0046872	molecular_function	metal ion binding
K	0004784	molecular_function	superoxide dismutase activity
K	0006801	biological_process	superoxide metabolic process
K	0016491	molecular_function	oxidoreductase activity
K	0019430	biological_process	removal of superoxide radicals
K	0046872	molecular_function	metal ion binding
L	0004784	molecular_function	superoxide dismutase activity
L	0006801	biological_process	superoxide metabolic process
L	0016491	molecular_function	oxidoreductase activity
L	0019430	biological_process	removal of superoxide radicals
L	0046872	molecular_function	metal ion binding
M	0004784	molecular_function	superoxide dismutase activity
M	0006801	biological_process	superoxide metabolic process
M	0016491	molecular_function	oxidoreductase activity
M	0019430	biological_process	removal of superoxide radicals
M	0046872	molecular_function	metal ion binding
N	0004784	molecular_function	superoxide dismutase activity
N	0006801	biological_process	superoxide metabolic process
N	0016491	molecular_function	oxidoreductase activity
N	0019430	biological_process	removal of superoxide radicals
N	0046872	molecular_function	metal ion binding
O	0004784	molecular_function	superoxide dismutase activity
O	0006801	biological_process	superoxide metabolic process
O	0016491	molecular_function	oxidoreductase activity
O	0019430	biological_process	removal of superoxide radicals
O	0046872	molecular_function	metal ion binding
P	0004784	molecular_function	superoxide dismutase activity
P	0006801	biological_process	superoxide metabolic process
P	0016491	molecular_function	oxidoreductase activity
P	0019430	biological_process	removal of superoxide radicals
P	0046872	molecular_function	metal ion binding
Q	0004784	molecular_function	superoxide dismutase activity
Q	0006801	biological_process	superoxide metabolic process
Q	0016491	molecular_function	oxidoreductase activity
Q	0019430	biological_process	removal of superoxide radicals
Q	0046872	molecular_function	metal ion binding
R	0004784	molecular_function	superoxide dismutase activity
R	0006801	biological_process	superoxide metabolic process
R	0016491	molecular_function	oxidoreductase activity
R	0019430	biological_process	removal of superoxide radicals
R	0046872	molecular_function	metal ion binding
S	0004784	molecular_function	superoxide dismutase activity
S	0006801	biological_process	superoxide metabolic process
S	0016491	molecular_function	oxidoreductase activity
S	0019430	biological_process	removal of superoxide radicals
S	0046872	molecular_function	metal ion binding
T	0004784	molecular_function	superoxide dismutase activity
T	0006801	biological_process	superoxide metabolic process
T	0016491	molecular_function	oxidoreductase activity
T	0019430	biological_process	removal of superoxide radicals
T	0046872	molecular_function	metal ion binding
U	0004784	molecular_function	superoxide dismutase activity
U	0006801	biological_process	superoxide metabolic process
U	0016491	molecular_function	oxidoreductase activity
U	0019430	biological_process	removal of superoxide radicals
U	0046872	molecular_function	metal ion binding
V	0004784	molecular_function	superoxide dismutase activity
V	0006801	biological_process	superoxide metabolic process
V	0016491	molecular_function	oxidoreductase activity
V	0019430	biological_process	removal of superoxide radicals
V	0046872	molecular_function	metal ion binding
W	0004784	molecular_function	superoxide dismutase activity
W	0006801	biological_process	superoxide metabolic process
W	0016491	molecular_function	oxidoreductase activity
W	0019430	biological_process	removal of superoxide radicals
W	0046872	molecular_function	metal ion binding
X	0004784	molecular_function	superoxide dismutase activity
X	0006801	biological_process	superoxide metabolic process
X	0016491	molecular_function	oxidoreductase activity
X	0019430	biological_process	removal of superoxide radicals
X	0046872	molecular_function	metal ion binding

Functional Information from PDB Data

site_id	AC1
Number of Residues	4
Details	BINDING SITE FOR RESIDUE ACT B 302

Chain	Residue
B	SER91
B	ARG209
B	LEU220
B	LYS221

site_id	AC2
Number of Residues	4
Details	BINDING SITE FOR RESIDUE ACT D 304

Chain	Residue
D	SER91
D	ARG209
D	LEU220
D	LYS221

site_id	AC3
Number of Residues	5
Details	BINDING SITE FOR RESIDUE ACT E 305

Chain	Residue
E	LEU220
E	LYS221
E	HOH1169
E	HOH2727
E	ARG209

site_id	AC4
Number of Residues	5
Details	BINDING SITE FOR RESIDUE ACT F 306

Chain	Residue
F	SER91
F	ARG209
F	LEU220
F	LYS221
F	LEU222

site_id	AC5
Number of Residues	4
Details	BINDING SITE FOR RESIDUE ACT H 308

Chain	Residue
H	SER91
H	ARG209
H	LEU220
H	LYS221

site_id	AC6
Number of Residues	3
Details	BINDING SITE FOR RESIDUE ACT J 310

Chain	Residue
J	ARG209
J	LEU220
J	LYS221

site_id	AC7
Number of Residues	6
Details	BINDING SITE FOR RESIDUE ACT L 312

Chain	Residue
L	SER91
L	ARG209
L	LEU220
L	LYS221
L	HOH2798
L	HOH2894

site_id	AC8
Number of Residues	5
Details	BINDING SITE FOR RESIDUE ACT M 313

Chain	Residue
M	SER91
M	ARG209
M	LEU220
M	LYS221
M	HOH2853

site_id	AC9
Number of Residues	4
Details	BINDING SITE FOR RESIDUE ACT N 314

Chain	Residue
N	SER91
N	ARG209
N	LEU220
N	LYS221

site_id	BC1
Number of Residues	6
Details	BINDING SITE FOR RESIDUE ACT O 315

Chain	Residue
O	SER91
O	ILE92
O	ARG209
O	LEU220
O	LYS221
O	HOH2743

site_id	BC2
Number of Residues	4
Details	BINDING SITE FOR RESIDUE ACT P 316

Chain	Residue
P	SER91
P	ARG209
P	LEU220
P	LYS221

site_id	BC3
Number of Residues	4
Details	BINDING SITE FOR RESIDUE ACT Q 317

Chain	Residue
Q	SER91
Q	ARG209
Q	LEU220
Q	LYS221

site_id	BC4
Number of Residues	4
Details	BINDING SITE FOR RESIDUE ACT R 318

Chain	Residue
R	SER91
R	ARG209
R	LEU220
R	LYS221

site_id	BC5
Number of Residues	5
Details	BINDING SITE FOR RESIDUE ACT S 319

Chain	Residue
S	SER91
S	ARG209
S	LEU220
S	LYS221
S	HOH2761

site_id	BC6
Number of Residues	5
Details	BINDING SITE FOR RESIDUE ACT T 320

Chain	Residue
Q	LEU149
T	SER91
T	ARG209
T	LEU220
T	LYS221

site_id	BC7
Number of Residues	3
Details	BINDING SITE FOR RESIDUE ACT U 321

Chain	Residue
U	SER91
U	ARG209
U	LEU220

site_id	BC8
Number of Residues	4
Details	BINDING SITE FOR RESIDUE ACT V 322

Chain	Residue
V	SER91
V	ARG209
V	LEU220
V	LYS221

site_id	BC9
Number of Residues	4
Details	BINDING SITE FOR RESIDUE ACT W 323

Chain	Residue
W	SER91
W	ARG209
W	LEU220
W	LYS221

site_id	CC1
Number of Residues	4
Details	BINDING SITE FOR RESIDUE ACT X 324

Chain	Residue
X	SER91
X	ARG209
X	LEU220
X	LYS221

site_id	CC2
Number of Residues	7
Details	BINDING SITE FOR RESIDUE BME B 402

Chain	Residue
A	ALA75
A	ARG78
A	ASP79
B	ASP72
B	ARG74
B	ALA75
B	ARG78

site_id	CC3
Number of Residues	8
Details	BINDING SITE FOR RESIDUE BME D 404

Chain	Residue
C	ALA75
C	ARG78
C	ASP79
D	ASP72
D	ARG74
D	ALA75
D	ARG78
D	HOH2716

site_id	CC4
Number of Residues	6
Details	BINDING SITE FOR RESIDUE BME F 406

Chain	Residue
E	ASP79
F	ASP72
F	ARG74
F	ALA75
F	ARG78
E	ALA75

site_id	CC5
Number of Residues	7
Details	BINDING SITE FOR RESIDUE BME H 408

Chain	Residue
G	ALA75
G	ARG78
G	ASP79
H	ASP72
H	ARG74
H	ALA75
H	ARG78

site_id	CC6
Number of Residues	9
Details	BINDING SITE FOR RESIDUE BME I 410

Chain	Residue
I	ALA75
I	ARG78
I	ASP79
I	HOH762
J	ASP72
J	ARG74
J	ALA75
J	ARG78
J	HOH2728

site_id	CC7
Number of Residues	7
Details	BINDING SITE FOR RESIDUE BME K 412

Chain	Residue
K	ALA75
K	ARG78
K	ASP79
L	ARG74
L	ALA75
L	ARG78
L	HOH2549

site_id	CC8
Number of Residues	9
Details	BINDING SITE FOR RESIDUE BME N 414

Chain	Residue
M	ALA75
M	ARG78
M	ASP79
M	HOH2911
N	ASP72
N	ARG74
N	ALA75
N	ARG78
N	HOH1513

site_id	CC9
Number of Residues	7
Details	BINDING SITE FOR RESIDUE BME P 416

Chain	Residue
O	ALA75
O	ARG78
O	ASP79
P	ASP72
P	ARG74
P	ALA75
P	ARG78

site_id	DC1
Number of Residues	8
Details	BINDING SITE FOR RESIDUE BME Q 418

Chain	Residue
Q	ALA75
Q	ARG78
Q	ASP79
R	ASP72
R	ARG74
R	ALA75
R	ARG78
R	HOH2742

site_id	DC2
Number of Residues	7
Details	BINDING SITE FOR RESIDUE BME T 420

Chain	Residue
S	ALA75
S	ARG78
S	ASP79
T	ASP72
T	ARG74
T	ALA75
T	ARG78

site_id	DC3
Number of Residues	6
Details	BINDING SITE FOR RESIDUE BME V 422

Chain	Residue
U	ALA75
U	ARG78
U	ASP79
V	ARG74
V	ALA75
V	ARG78

site_id	DC4
Number of Residues	9
Details	BINDING SITE FOR RESIDUE BME X 424

Chain	Residue
W	ALA75
W	ARG78
W	ASP79
W	HOH2726
X	ASP72
X	ARG74
X	ALA75
X	ARG78
X	HOH1887

Functional Information from PROSITE/UniProt

site_id	PS00088
Number of Residues	8
Details	SOD_MN Manganese and iron superoxide dismutases signature. DvWEHAYY

Chain	Residue	Details
A	ASP176-TYR183

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	96
Details	Binding site: {"evidences":[{"evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

		Sequence (fasta)
		PDBx/mmCIF
		PDBML format (no-atom)
		PDB format (full)
		Validation report (PDF)
		EDMap 2fo-fc (MTZ)