1P72
Crystal structure of EHV4-TK complexed with Thy and ADP
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0000166 | molecular_function | nucleotide binding |
| A | 0004797 | molecular_function | thymidine kinase activity |
| A | 0005524 | molecular_function | ATP binding |
| A | 0006230 | biological_process | TMP biosynthetic process |
| A | 0009157 | biological_process | deoxyribonucleoside monophosphate biosynthetic process |
| A | 0016301 | molecular_function | kinase activity |
| A | 0016740 | molecular_function | transferase activity |
| A | 0071897 | biological_process | DNA biosynthetic process |
| B | 0000166 | molecular_function | nucleotide binding |
| B | 0004797 | molecular_function | thymidine kinase activity |
| B | 0005524 | molecular_function | ATP binding |
| B | 0006230 | biological_process | TMP biosynthetic process |
| B | 0009157 | biological_process | deoxyribonucleoside monophosphate biosynthetic process |
| B | 0016301 | molecular_function | kinase activity |
| B | 0016740 | molecular_function | transferase activity |
| B | 0071897 | biological_process | DNA biosynthetic process |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE SO4 A 801 |
| Chain | Residue |
| A | PHE69 |
| A | GLU70 |
| A | THR71 |
| A | ARG104 |
| A | HOH846 |
| A | HOH881 |
| B | SER159 |
| site_id | AC2 |
| Number of Residues | 8 |
| Details | BINDING SITE FOR RESIDUE SO4 B 802 |
| Chain | Residue |
| B | PHE69 |
| B | GLU70 |
| B | THR71 |
| B | ARG104 |
| B | HOH873 |
| B | HOH963 |
| A | SER159 |
| A | HOH847 |
| site_id | AC3 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE SO4 A 803 |
| Chain | Residue |
| A | ARG172 |
| A | PRO174 |
| A | GLN175 |
| site_id | AC4 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE SO4 A 804 |
| Chain | Residue |
| A | GLN202 |
| B | LEU125 |
| B | ARG127 |
| site_id | AC5 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE SO4 A 805 |
| Chain | Residue |
| A | ARG313 |
| A | GLN314 |
| site_id | AC6 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE SO4 A 806 |
| Chain | Residue |
| A | ARG172 |
| A | HOH937 |
| B | ARG172 |
| site_id | AC7 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE SO4 B 807 |
| Chain | Residue |
| B | ARG172 |
| B | PRO174 |
| B | GLN175 |
| site_id | AC8 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE SO4 B 808 |
| Chain | Residue |
| B | THR311 |
| B | HOH861 |
| site_id | AC9 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE SO4 B 809 |
| Chain | Residue |
| A | THR129 |
| A | GLN130 |
| B | ARG194 |
| site_id | BC1 |
| Number of Residues | 22 |
| Details | BINDING SITE FOR RESIDUE ADP A 501 |
| Chain | Residue |
| A | VAL33 |
| A | TYR34 |
| A | GLY35 |
| A | ILE36 |
| A | GLY37 |
| A | LYS38 |
| A | SER39 |
| A | THR40 |
| A | ARG192 |
| A | ARG196 |
| A | GLY310 |
| A | THR311 |
| A | PRO312 |
| A | CYS315 |
| A | HOH809 |
| A | HOH819 |
| A | HOH829 |
| A | HOH852 |
| A | HOH870 |
| A | HOH900 |
| A | HOH906 |
| A | HOH1030 |
| site_id | BC2 |
| Number of Residues | 11 |
| Details | BINDING SITE FOR RESIDUE THM A 701 |
| Chain | Residue |
| A | TYR34 |
| A | GLU60 |
| A | ILE74 |
| A | TYR78 |
| A | GLN102 |
| A | PHE105 |
| A | ARG139 |
| A | SER144 |
| A | PHE148 |
| A | HOH872 |
| A | HOH957 |
| site_id | BC3 |
| Number of Residues | 18 |
| Details | BINDING SITE FOR RESIDUE ADP B 502 |
| Chain | Residue |
| B | TYR34 |
| B | GLY35 |
| B | ILE36 |
| B | GLY37 |
| B | LYS38 |
| B | SER39 |
| B | THR40 |
| B | ARG192 |
| B | THR195 |
| B | ARG196 |
| B | GLY310 |
| B | THR311 |
| B | PRO312 |
| B | CYS315 |
| B | HOH815 |
| B | HOH823 |
| B | HOH855 |
| B | HOH912 |
| site_id | BC4 |
| Number of Residues | 11 |
| Details | BINDING SITE FOR RESIDUE THM B 702 |
| Chain | Residue |
| B | TYR34 |
| B | GLU60 |
| B | ILE74 |
| B | GLN102 |
| B | PHE105 |
| B | SER144 |
| B | PHE148 |
| B | GLU201 |
| B | HOH827 |
| B | HOH893 |
| B | HOH925 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 2 |
| Details | Active site: {"description":"Proton acceptor","evidences":[{"source":"HAMAP-Rule","id":"MF_04029","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 20 |
| Details | Binding site: {"evidences":[{"source":"HAMAP-Rule","id":"MF_04029","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"14527394","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1P72","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 4 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"14527394","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1P72","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI4 |
| Number of Residues | 2 |
| Details | Binding site: {"evidences":[{"source":"HAMAP-Rule","id":"MF_04029","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
Catalytic Information from CSA
| site_id | CSA1 |
| Number of Residues | 4 |
| Details | Annotated By Reference To The Literature 1kim |
| Chain | Residue | Details |
| A | GLY35 | |
| A | ARG198 | |
| A | GLU60 | |
| A | ARG139 |
| site_id | CSA2 |
| Number of Residues | 4 |
| Details | Annotated By Reference To The Literature 1kim |
| Chain | Residue | Details |
| B | GLY35 | |
| B | ARG198 | |
| B | GLU60 | |
| B | ARG139 |
