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1P4D

F factor TraI Relaxase Domain

Functional Information from PDB Data
site_idAC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG A 900
ChainResidue
AHIS146
AHIS157
AHIS159
AHOH942
AHOH956
AHOH981

site_idAC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE MG B 901
ChainResidue
BHOH934
BHIS146
BHIS157
BHIS159

site_idAC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE MG C 902
ChainResidue
CHIS146
CHIS157
CHIS159
CHOH905

site_idAC4
Number of Residues5
DetailsBINDING SITE FOR RESIDUE EDO A 600
ChainResidue
AARG101
AGLN108
AGLN207
BARG115
BEDO605

site_idAC5
Number of Residues2
DetailsBINDING SITE FOR RESIDUE EDO A 601
ChainResidue
ALYS100
AASP104

site_idAC6
Number of Residues6
DetailsBINDING SITE FOR RESIDUE EDO C 603
ChainResidue
CARG101
CASP104
CALA105
CGLN108
CGLN207
CLEU211

site_idAC7
Number of Residues1
DetailsBINDING SITE FOR RESIDUE EDO B 604
ChainResidue
BSER46

site_idAC8
Number of Residues4
DetailsBINDING SITE FOR RESIDUE EDO B 605
ChainResidue
AGLN207
AEDO600
BPHE112
BLYS203

site_idAC9
Number of Residues2
DetailsBINDING SITE FOR RESIDUE EDO A 606
ChainResidue
APHE112
AGLN116

site_idBC1
Number of Residues1
DetailsBINDING SITE FOR RESIDUE EDO B 607
ChainResidue
BSER12

site_idBC2
Number of Residues1
DetailsBINDING SITE FOR RESIDUE EDO A 608
ChainResidue
ALYS282

site_idBC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE EDO B 610
ChainResidue
AASP128
BVAL125
BGLU171
BLYS173
BHOH950
BHOH951

site_idBC4
Number of Residues7
DetailsBINDING SITE FOR RESIDUE EDO A 612
ChainResidue
AALA34
AASP111
AVAL114
AARG115
AHOH926
AHOH934
AHOH979

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues3
DetailsACT_SITE: O-(5'-phospho-DNA)-tyrosine intermediate; for relaxase activity => ECO:0000305
ChainResidueDetails
ATYR16
BTYR16
CTYR16

site_idSWS_FT_FI2
Number of Residues3
DetailsACT_SITE: Relaxase => ECO:0000255
ChainResidueDetails
ATYR17
BTYR17
CTYR17

site_idSWS_FT_FI3
Number of Residues9
DetailsBINDING: BINDING => ECO:0000269|PubMed:14604527
ChainResidueDetails
AHIS146
BHIS146
BHIS157
BHIS159
CHIS146
CHIS157
CHIS159
AHIS157
AHIS159

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PDB entries from 2024-05-29

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