1OSN

Crystal structure of Varicella zoster virus thymidine kinase in complex with BVDU-MP and ADP

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0004797	molecular_function	thymidine kinase activity
A	0005524	molecular_function	ATP binding
A	0006230	biological_process	TMP biosynthetic process
A	0009157	biological_process	deoxyribonucleoside monophosphate biosynthetic process
A	0016301	molecular_function	kinase activity
A	0016310	biological_process	phosphorylation
A	0071897	biological_process	DNA biosynthetic process
B	0004797	molecular_function	thymidine kinase activity
B	0005524	molecular_function	ATP binding
B	0006230	biological_process	TMP biosynthetic process
B	0009157	biological_process	deoxyribonucleoside monophosphate biosynthetic process
B	0016301	molecular_function	kinase activity
B	0016310	biological_process	phosphorylation
B	0071897	biological_process	DNA biosynthetic process
C	0004797	molecular_function	thymidine kinase activity
C	0005524	molecular_function	ATP binding
C	0006230	biological_process	TMP biosynthetic process
C	0009157	biological_process	deoxyribonucleoside monophosphate biosynthetic process
C	0016301	molecular_function	kinase activity
C	0016310	biological_process	phosphorylation
C	0071897	biological_process	DNA biosynthetic process
D	0004797	molecular_function	thymidine kinase activity
D	0005524	molecular_function	ATP binding
D	0006230	biological_process	TMP biosynthetic process
D	0009157	biological_process	deoxyribonucleoside monophosphate biosynthetic process
D	0016301	molecular_function	kinase activity
D	0016310	biological_process	phosphorylation
D	0071897	biological_process	DNA biosynthetic process

Functional Information from PDB Data

site_id	AC1
Number of Residues	8
Details	BINDING SITE FOR RESIDUE ADP A 400

Chain	Residue
A	TYR21
A	GLY22
A	ILE23
A	GLY24
A	LYS25
A	THR26
A	THR27
A	BVP500

---

site_id	AC2
Number of Residues	15
Details	BINDING SITE FOR RESIDUE BVP A 500

Chain	Residue
A	GLY22
A	GLU48
A	TRP53
A	ILE62
A	TYR66
A	GLN90
A	PHE93
A	HIS97
A	ARG130
A	ALA134
A	SER135
A	PHE139
A	ADP400
A	HOH600
A	TYR21

---

site_id	AC3
Number of Residues	10
Details	BINDING SITE FOR RESIDUE ADP B 1400

Chain	Residue
B	TYR21
B	GLY22
B	ILE23
B	GLY24
B	LYS25
B	THR26
B	THR27
B	ARG183
B	GLN300
B	BVP1500

---

site_id	AC4
Number of Residues	14
Details	BINDING SITE FOR RESIDUE BVP B 1500

Chain	Residue
B	TYR21
B	GLY22
B	GLU48
B	TRP53
B	ILE62
B	TYR66
B	GLN90
B	PHE93
B	HIS97
B	ARG130
B	ALA134
B	SER135
B	PHE139
B	ADP1400

---

site_id	AC5
Number of Residues	10
Details	BINDING SITE FOR RESIDUE ADP C 2400

Chain	Residue
C	TYR21
C	GLY22
C	ILE23
C	GLY24
C	LYS25
C	THR26
C	THR27
C	ARG183
C	GLN300
C	BVP2500

---

site_id	AC6
Number of Residues	14
Details	BINDING SITE FOR RESIDUE BVP C 2500

Chain	Residue
C	TYR21
C	GLY22
C	GLU48
C	TRP53
C	ILE62
C	TYR66
C	GLN90
C	PHE93
C	HIS97
C	ARG130
C	ALA134
C	SER135
C	PHE139
C	ADP2400

---

site_id	AC7
Number of Residues	10
Details	BINDING SITE FOR RESIDUE ADP D 3400

Chain	Residue
D	TYR21
D	GLY22
D	ILE23
D	GLY24
D	LYS25
D	THR26
D	THR27
D	ARG183
D	GLN300
D	BVP3500

---

site_id	AC8
Number of Residues	14
Details	BINDING SITE FOR RESIDUE BVP D 3500

Chain	Residue
D	TYR21
D	GLY22
D	GLU48
D	TRP53
D	ILE62
D	TYR66
D	GLN90
D	PHE93
D	HIS97
D	ARG130
D	ALA134
D	SER135
D	PHE139
D	ADP3400

---

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	4
Details	ACT_SITE: Proton acceptor => ECO:0000255|HAMAP-Rule:MF_04029

Chain	Residue	Details
A	GLU48
B	GLU48
C	GLU48
D	GLU48

---

site_id	SWS_FT_FI2
Number of Residues	20
Details	BINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_04029

Chain	Residue	Details
A	GLY19
B	ARG189
C	GLY19
C	TYR66
C	GLN90
C	ARG183
C	ARG189
D	GLY19
D	TYR66
D	GLN90
D	ARG183
A	TYR66
D	ARG189
A	GLN90
A	ARG183
A	ARG189
B	GLY19
B	TYR66
B	GLN90
B	ARG183

---

Catalytic Information from CSA

site_id	CSA1
Number of Residues	3
Details	Annotated By Reference To The Literature 1kim

Chain	Residue	Details
A	GLY22
A	GLU48
A	ARG130

---

site_id	CSA2
Number of Residues	3
Details	Annotated By Reference To The Literature 1kim

Chain	Residue	Details
B	GLY22
B	GLU48
B	ARG130

---

site_id	CSA3
Number of Residues	3
Details	Annotated By Reference To The Literature 1kim

Chain	Residue	Details
C	GLY22
C	GLU48
C	ARG130

---

site_id	CSA4
Number of Residues	3
Details	Annotated By Reference To The Literature 1kim

Chain	Residue	Details
D	GLY22
D	GLU48
D	ARG130

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