1ORR
Crystal Structure of CDP-Tyvelose 2-Epimerase complexed with NAD and CDP
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0008460 | molecular_function | dTDP-glucose 4,6-dehydratase activity |
| A | 0009103 | biological_process | lipopolysaccharide biosynthetic process |
| A | 0016853 | molecular_function | isomerase activity |
| A | 0047732 | molecular_function | CDP-abequose epimerase activity |
| B | 0008460 | molecular_function | dTDP-glucose 4,6-dehydratase activity |
| B | 0009103 | biological_process | lipopolysaccharide biosynthetic process |
| B | 0016853 | molecular_function | isomerase activity |
| B | 0047732 | molecular_function | CDP-abequose epimerase activity |
| C | 0008460 | molecular_function | dTDP-glucose 4,6-dehydratase activity |
| C | 0009103 | biological_process | lipopolysaccharide biosynthetic process |
| C | 0016853 | molecular_function | isomerase activity |
| C | 0047732 | molecular_function | CDP-abequose epimerase activity |
| D | 0008460 | molecular_function | dTDP-glucose 4,6-dehydratase activity |
| D | 0009103 | biological_process | lipopolysaccharide biosynthetic process |
| D | 0016853 | molecular_function | isomerase activity |
| D | 0047732 | molecular_function | CDP-abequose epimerase activity |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 31 |
| Details | BINDING SITE FOR RESIDUE NAD A 1200 |
| Chain | Residue |
| A | GLY8 |
| A | GLY57 |
| A | ASP58 |
| A | ILE59 |
| A | LEU80 |
| A | ALA81 |
| A | GLY82 |
| A | VAL84 |
| A | SER123 |
| A | SER124 |
| A | TYR165 |
| A | CYS10 |
| A | LYS169 |
| A | HIS192 |
| A | MET195 |
| A | GLN206 |
| A | HOH1214 |
| A | HOH1215 |
| A | HOH1219 |
| A | HOH1234 |
| A | HOH1241 |
| A | HOH1304 |
| A | GLY11 |
| A | HOH1343 |
| A | HOH1431 |
| A | PHE12 |
| A | LEU13 |
| A | ASP32 |
| A | ASN33 |
| A | SER35 |
| A | ARG36 |
| site_id | AC2 |
| Number of Residues | 18 |
| Details | BINDING SITE FOR RESIDUE CDP A 1201 |
| Chain | Residue |
| A | ASN126 |
| A | LYS127 |
| A | SER194 |
| A | TYR204 |
| A | TRP208 |
| A | TRP211 |
| A | PHE212 |
| A | ILE229 |
| A | SER230 |
| A | GLN235 |
| A | ARG237 |
| A | LEU276 |
| A | ARG299 |
| A | ASP302 |
| A | HOH1241 |
| A | HOH1276 |
| A | HOH1431 |
| A | HOH1507 |
| site_id | AC3 |
| Number of Residues | 27 |
| Details | BINDING SITE FOR RESIDUE NAD B 1300 |
| Chain | Residue |
| B | GLY8 |
| B | CYS10 |
| B | GLY11 |
| B | PHE12 |
| B | LEU13 |
| B | ASP32 |
| B | ASN33 |
| B | SER35 |
| B | ARG36 |
| B | GLY57 |
| B | ASP58 |
| B | ILE59 |
| B | LEU80 |
| B | ALA81 |
| B | GLY82 |
| B | VAL84 |
| B | SER123 |
| B | SER124 |
| B | TYR165 |
| B | LYS169 |
| B | HIS192 |
| B | MET195 |
| B | HOH1309 |
| B | HOH1310 |
| B | HOH1314 |
| B | HOH1330 |
| B | HOH1406 |
| site_id | AC4 |
| Number of Residues | 19 |
| Details | BINDING SITE FOR RESIDUE CDP B 1301 |
| Chain | Residue |
| B | ASN126 |
| B | LYS127 |
| B | SER194 |
| B | TYR204 |
| B | TRP208 |
| B | TRP211 |
| B | PHE212 |
| B | SER230 |
| B | GLN235 |
| B | ARG237 |
| B | LEU276 |
| B | ARG299 |
| B | ASP302 |
| B | HOH1366 |
| B | HOH1367 |
| B | HOH1471 |
| B | HOH1472 |
| B | HOH1518 |
| B | HOH1546 |
| site_id | AC5 |
| Number of Residues | 30 |
| Details | BINDING SITE FOR RESIDUE NAD C 1400 |
| Chain | Residue |
| C | LEU13 |
| C | ASP32 |
| C | ASN33 |
| C | SER35 |
| C | ARG36 |
| C | GLY57 |
| C | ASP58 |
| C | ILE59 |
| C | LEU80 |
| C | ALA81 |
| C | GLY82 |
| C | VAL84 |
| C | SER123 |
| C | SER124 |
| C | THR125 |
| C | TYR165 |
| C | LYS169 |
| C | HIS192 |
| C | MET195 |
| C | GLN206 |
| C | HOH1410 |
| C | HOH1411 |
| C | HOH1416 |
| C | HOH1430 |
| C | HOH1498 |
| C | HOH1541 |
| C | GLY8 |
| C | CYS10 |
| C | GLY11 |
| C | PHE12 |
| site_id | AC6 |
| Number of Residues | 18 |
| Details | BINDING SITE FOR RESIDUE CDP C 1401 |
| Chain | Residue |
| C | ASN126 |
| C | LYS127 |
| C | SER194 |
| C | TYR204 |
| C | TRP208 |
| C | TRP211 |
| C | PHE212 |
| C | ILE229 |
| C | SER230 |
| C | GLN235 |
| C | ARG237 |
| C | ARG299 |
| C | ASP302 |
| C | HOH1436 |
| C | HOH1471 |
| C | HOH1472 |
| C | HOH1543 |
| C | HOH1573 |
| site_id | AC7 |
| Number of Residues | 30 |
| Details | BINDING SITE FOR RESIDUE NAD D 1500 |
| Chain | Residue |
| D | GLY8 |
| D | CYS10 |
| D | GLY11 |
| D | PHE12 |
| D | LEU13 |
| D | ASP32 |
| D | ASN33 |
| D | SER35 |
| D | ARG36 |
| D | GLY57 |
| D | ASP58 |
| D | ILE59 |
| D | LEU80 |
| D | ALA81 |
| D | GLY82 |
| D | VAL84 |
| D | SER123 |
| D | SER124 |
| D | TYR165 |
| D | LYS169 |
| D | HIS192 |
| D | MET195 |
| D | GLN206 |
| D | CDP1501 |
| D | HOH1503 |
| D | HOH1504 |
| D | HOH1508 |
| D | HOH1524 |
| D | HOH1619 |
| D | HOH1646 |
| site_id | AC8 |
| Number of Residues | 21 |
| Details | BINDING SITE FOR RESIDUE CDP D 1501 |
| Chain | Residue |
| D | LYS127 |
| D | SER194 |
| D | TYR204 |
| D | GLY207 |
| D | TRP208 |
| D | TRP211 |
| D | PHE212 |
| D | SER230 |
| D | GLN235 |
| D | ARG237 |
| D | LEU276 |
| D | ARG299 |
| D | ASP302 |
| D | NAD1500 |
| D | HOH1563 |
| D | HOH1564 |
| D | HOH1607 |
| D | HOH1643 |
| D | HOH1645 |
| D | HOH1672 |
| D | HOH1728 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 4 |
| Details | ACT_SITE: Proton acceptor |
| Chain | Residue | Details |
| A | TYR165 | |
| B | TYR165 | |
| C | TYR165 | |
| D | TYR165 |
| site_id | SWS_FT_FI2 |
| Number of Residues | 4 |
| Details | BINDING: BINDING => ECO:0000269|PubMed:12642575 |
| Chain | Residue | Details |
| A | THR125 | |
| B | THR125 | |
| C | THR125 | |
| D | THR125 |
Catalytic Information from CSA
| site_id | CSA1 |
| Number of Residues | 3 |
| Details | Annotated By Reference To The Literature 1eq2 |
| Chain | Residue | Details |
| A | LYS169 | |
| A | SER124 | |
| A | TYR165 |
| site_id | CSA10 |
| Number of Residues | 4 |
| Details | Annotated By Reference To The Literature 1eq2 |
| Chain | Residue | Details |
| B | ASN100 | |
| B | LYS169 | |
| B | TYR165 | |
| B | THR125 |
| site_id | CSA11 |
| Number of Residues | 4 |
| Details | Annotated By Reference To The Literature 1eq2 |
| Chain | Residue | Details |
| C | ASN100 | |
| C | LYS169 | |
| C | TYR165 | |
| C | THR125 |
| site_id | CSA12 |
| Number of Residues | 4 |
| Details | Annotated By Reference To The Literature 1eq2 |
| Chain | Residue | Details |
| D | ASN100 | |
| D | LYS169 | |
| D | TYR165 | |
| D | THR125 |
| site_id | CSA13 |
| Number of Residues | 2 |
| Details | Annotated By Reference To The Literature 1eq2 |
| Chain | Residue | Details |
| A | LYS169 | |
| A | TYR165 |
| site_id | CSA14 |
| Number of Residues | 2 |
| Details | Annotated By Reference To The Literature 1eq2 |
| Chain | Residue | Details |
| B | LYS169 | |
| B | TYR165 |
| site_id | CSA15 |
| Number of Residues | 2 |
| Details | Annotated By Reference To The Literature 1eq2 |
| Chain | Residue | Details |
| C | LYS169 | |
| C | TYR165 |
| site_id | CSA16 |
| Number of Residues | 2 |
| Details | Annotated By Reference To The Literature 1eq2 |
| Chain | Residue | Details |
| D | LYS169 | |
| D | TYR165 |
| site_id | CSA2 |
| Number of Residues | 3 |
| Details | Annotated By Reference To The Literature 1eq2 |
| Chain | Residue | Details |
| B | LYS169 | |
| B | SER124 | |
| B | TYR165 |
| site_id | CSA3 |
| Number of Residues | 3 |
| Details | Annotated By Reference To The Literature 1eq2 |
| Chain | Residue | Details |
| C | LYS169 | |
| C | SER124 | |
| C | TYR165 |
| site_id | CSA4 |
| Number of Residues | 3 |
| Details | Annotated By Reference To The Literature 1eq2 |
| Chain | Residue | Details |
| D | LYS169 | |
| D | SER124 | |
| D | TYR165 |
| site_id | CSA5 |
| Number of Residues | 3 |
| Details | Annotated By Reference To The Literature 1eq2 |
| Chain | Residue | Details |
| A | LYS169 | |
| A | THR125 | |
| A | TYR165 |
| site_id | CSA6 |
| Number of Residues | 3 |
| Details | Annotated By Reference To The Literature 1eq2 |
| Chain | Residue | Details |
| B | LYS169 | |
| B | THR125 | |
| B | TYR165 |
| site_id | CSA7 |
| Number of Residues | 3 |
| Details | Annotated By Reference To The Literature 1eq2 |
| Chain | Residue | Details |
| C | LYS169 | |
| C | THR125 | |
| C | TYR165 |
| site_id | CSA8 |
| Number of Residues | 3 |
| Details | Annotated By Reference To The Literature 1eq2 |
| Chain | Residue | Details |
| D | LYS169 | |
| D | THR125 | |
| D | TYR165 |
| site_id | CSA9 |
| Number of Residues | 4 |
| Details | Annotated By Reference To The Literature 1eq2 |
| Chain | Residue | Details |
| A | ASN100 | |
| A | LYS169 | |
| A | TYR165 | |
| A | THR125 |
