1OGY
Crystal structure of the heterodimeric nitrate reductase from Rhodobacter sphaeroides
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0005506 | molecular_function | iron ion binding |
A | 0006777 | biological_process | Mo-molybdopterin cofactor biosynthetic process |
A | 0008940 | molecular_function | nitrate reductase activity |
A | 0009055 | molecular_function | electron transfer activity |
A | 0016491 | molecular_function | oxidoreductase activity |
A | 0030151 | molecular_function | molybdenum ion binding |
A | 0042128 | biological_process | nitrate assimilation |
A | 0042597 | cellular_component | periplasmic space |
A | 0043546 | molecular_function | molybdopterin cofactor binding |
A | 0045333 | biological_process | cellular respiration |
A | 0046872 | molecular_function | metal ion binding |
A | 0050140 | molecular_function | nitrate reductase (cytochrome) activity |
A | 0051539 | molecular_function | 4 iron, 4 sulfur cluster binding |
A | 1990204 | cellular_component | oxidoreductase complex |
B | 0009061 | biological_process | anaerobic respiration |
B | 0042597 | cellular_component | periplasmic space |
B | 0046872 | molecular_function | metal ion binding |
C | 0005506 | molecular_function | iron ion binding |
C | 0006777 | biological_process | Mo-molybdopterin cofactor biosynthetic process |
C | 0008940 | molecular_function | nitrate reductase activity |
C | 0009055 | molecular_function | electron transfer activity |
C | 0016491 | molecular_function | oxidoreductase activity |
C | 0030151 | molecular_function | molybdenum ion binding |
C | 0042128 | biological_process | nitrate assimilation |
C | 0042597 | cellular_component | periplasmic space |
C | 0043546 | molecular_function | molybdopterin cofactor binding |
C | 0045333 | biological_process | cellular respiration |
C | 0046872 | molecular_function | metal ion binding |
C | 0050140 | molecular_function | nitrate reductase (cytochrome) activity |
C | 0051539 | molecular_function | 4 iron, 4 sulfur cluster binding |
C | 1990204 | cellular_component | oxidoreductase complex |
D | 0009061 | biological_process | anaerobic respiration |
D | 0042597 | cellular_component | periplasmic space |
D | 0046872 | molecular_function | metal ion binding |
E | 0005506 | molecular_function | iron ion binding |
E | 0006777 | biological_process | Mo-molybdopterin cofactor biosynthetic process |
E | 0008940 | molecular_function | nitrate reductase activity |
E | 0009055 | molecular_function | electron transfer activity |
E | 0016491 | molecular_function | oxidoreductase activity |
E | 0030151 | molecular_function | molybdenum ion binding |
E | 0042128 | biological_process | nitrate assimilation |
E | 0042597 | cellular_component | periplasmic space |
E | 0043546 | molecular_function | molybdopterin cofactor binding |
E | 0045333 | biological_process | cellular respiration |
E | 0046872 | molecular_function | metal ion binding |
E | 0050140 | molecular_function | nitrate reductase (cytochrome) activity |
E | 0051539 | molecular_function | 4 iron, 4 sulfur cluster binding |
E | 1990204 | cellular_component | oxidoreductase complex |
F | 0009061 | biological_process | anaerobic respiration |
F | 0042597 | cellular_component | periplasmic space |
F | 0046872 | molecular_function | metal ion binding |
G | 0005506 | molecular_function | iron ion binding |
G | 0006777 | biological_process | Mo-molybdopterin cofactor biosynthetic process |
G | 0008940 | molecular_function | nitrate reductase activity |
G | 0009055 | molecular_function | electron transfer activity |
G | 0016491 | molecular_function | oxidoreductase activity |
G | 0030151 | molecular_function | molybdenum ion binding |
G | 0042128 | biological_process | nitrate assimilation |
G | 0042597 | cellular_component | periplasmic space |
G | 0043546 | molecular_function | molybdopterin cofactor binding |
G | 0045333 | biological_process | cellular respiration |
G | 0046872 | molecular_function | metal ion binding |
G | 0050140 | molecular_function | nitrate reductase (cytochrome) activity |
G | 0051539 | molecular_function | 4 iron, 4 sulfur cluster binding |
G | 1990204 | cellular_component | oxidoreductase complex |
H | 0009061 | biological_process | anaerobic respiration |
H | 0042597 | cellular_component | periplasmic space |
H | 0046872 | molecular_function | metal ion binding |
I | 0005506 | molecular_function | iron ion binding |
I | 0006777 | biological_process | Mo-molybdopterin cofactor biosynthetic process |
I | 0008940 | molecular_function | nitrate reductase activity |
I | 0009055 | molecular_function | electron transfer activity |
I | 0016491 | molecular_function | oxidoreductase activity |
I | 0030151 | molecular_function | molybdenum ion binding |
I | 0042128 | biological_process | nitrate assimilation |
I | 0042597 | cellular_component | periplasmic space |
I | 0043546 | molecular_function | molybdopterin cofactor binding |
I | 0045333 | biological_process | cellular respiration |
I | 0046872 | molecular_function | metal ion binding |
I | 0050140 | molecular_function | nitrate reductase (cytochrome) activity |
I | 0051539 | molecular_function | 4 iron, 4 sulfur cluster binding |
I | 1990204 | cellular_component | oxidoreductase complex |
J | 0009061 | biological_process | anaerobic respiration |
J | 0042597 | cellular_component | periplasmic space |
J | 0046872 | molecular_function | metal ion binding |
K | 0005506 | molecular_function | iron ion binding |
K | 0006777 | biological_process | Mo-molybdopterin cofactor biosynthetic process |
K | 0008940 | molecular_function | nitrate reductase activity |
K | 0009055 | molecular_function | electron transfer activity |
K | 0016491 | molecular_function | oxidoreductase activity |
K | 0030151 | molecular_function | molybdenum ion binding |
K | 0042128 | biological_process | nitrate assimilation |
K | 0042597 | cellular_component | periplasmic space |
K | 0043546 | molecular_function | molybdopterin cofactor binding |
K | 0045333 | biological_process | cellular respiration |
K | 0046872 | molecular_function | metal ion binding |
K | 0050140 | molecular_function | nitrate reductase (cytochrome) activity |
K | 0051539 | molecular_function | 4 iron, 4 sulfur cluster binding |
K | 1990204 | cellular_component | oxidoreductase complex |
L | 0009061 | biological_process | anaerobic respiration |
L | 0042597 | cellular_component | periplasmic space |
L | 0046872 | molecular_function | metal ion binding |
M | 0005506 | molecular_function | iron ion binding |
M | 0006777 | biological_process | Mo-molybdopterin cofactor biosynthetic process |
M | 0008940 | molecular_function | nitrate reductase activity |
M | 0009055 | molecular_function | electron transfer activity |
M | 0016491 | molecular_function | oxidoreductase activity |
M | 0030151 | molecular_function | molybdenum ion binding |
M | 0042128 | biological_process | nitrate assimilation |
M | 0042597 | cellular_component | periplasmic space |
M | 0043546 | molecular_function | molybdopterin cofactor binding |
M | 0045333 | biological_process | cellular respiration |
M | 0046872 | molecular_function | metal ion binding |
M | 0050140 | molecular_function | nitrate reductase (cytochrome) activity |
M | 0051539 | molecular_function | 4 iron, 4 sulfur cluster binding |
M | 1990204 | cellular_component | oxidoreductase complex |
N | 0009061 | biological_process | anaerobic respiration |
N | 0042597 | cellular_component | periplasmic space |
N | 0046872 | molecular_function | metal ion binding |
O | 0005506 | molecular_function | iron ion binding |
O | 0006777 | biological_process | Mo-molybdopterin cofactor biosynthetic process |
O | 0008940 | molecular_function | nitrate reductase activity |
O | 0009055 | molecular_function | electron transfer activity |
O | 0016491 | molecular_function | oxidoreductase activity |
O | 0030151 | molecular_function | molybdenum ion binding |
O | 0042128 | biological_process | nitrate assimilation |
O | 0042597 | cellular_component | periplasmic space |
O | 0043546 | molecular_function | molybdopterin cofactor binding |
O | 0045333 | biological_process | cellular respiration |
O | 0046872 | molecular_function | metal ion binding |
O | 0050140 | molecular_function | nitrate reductase (cytochrome) activity |
O | 0051539 | molecular_function | 4 iron, 4 sulfur cluster binding |
O | 1990204 | cellular_component | oxidoreductase complex |
P | 0009061 | biological_process | anaerobic respiration |
P | 0042597 | cellular_component | periplasmic space |
P | 0046872 | molecular_function | metal ion binding |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE SF4 A1801 |
Chain | Residue |
A | CYS19 |
A | CYS22 |
A | CYS26 |
A | CYS54 |
A | GLY57 |
A | PRO194 |
site_id | AC2 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE MO A1802 |
Chain | Residue |
A | CYS152 |
A | MGD1803 |
A | MGD1804 |
site_id | AC3 |
Number of Residues | 31 |
Details | BINDING SITE FOR RESIDUE MGD A1803 |
Chain | Residue |
A | ARG20 |
A | GLN123 |
A | ASN148 |
A | CYS152 |
A | GLN350 |
A | GLN384 |
A | VAL454 |
A | ASN455 |
A | ASN456 |
A | ASN457 |
A | ALA460 |
A | SER482 |
A | ASP483 |
A | THR487 |
A | ALA499 |
A | ALA500 |
A | MET501 |
A | LYS505 |
A | ASP532 |
A | THR692 |
A | ARG694 |
A | TRP699 |
A | HIS700 |
A | SER701 |
A | SER703 |
A | TRP768 |
A | ASN776 |
A | PHE792 |
A | LYS793 |
A | MO1802 |
A | MGD1804 |
site_id | AC4 |
Number of Residues | 31 |
Details | BINDING SITE FOR RESIDUE MGD A1804 |
Chain | Residue |
A | LYS56 |
A | CYS152 |
A | TRP185 |
A | GLY186 |
A | SER187 |
A | ASN188 |
A | GLU191 |
A | MET192 |
A | SER216 |
A | THR217 |
A | HIS220 |
A | PHE232 |
A | GLY235 |
A | ASP237 |
A | THR345 |
A | MET346 |
A | GLY347 |
A | PHE348 |
A | GLY383 |
A | GLN384 |
A | GLY693 |
A | ARG694 |
A | VAL695 |
A | LEU696 |
A | HIS698 |
A | TRP699 |
A | HIS700 |
A | LYS793 |
A | LYS794 |
A | MO1802 |
A | MGD1803 |
site_id | AC5 |
Number of Residues | 13 |
Details | BINDING SITE FOR RESIDUE HEC B1128 |
Chain | Residue |
B | ARG30 |
B | PRO40 |
B | VAL41 |
B | ILE42 |
B | PRO43 |
B | HIS44 |
B | TYR49 |
B | ARG57 |
B | CYS58 |
B | CYS61 |
B | HIS62 |
B | CYS98 |
B | HIS102 |
site_id | AC6 |
Number of Residues | 21 |
Details | BINDING SITE FOR RESIDUE HEC B1129 |
Chain | Residue |
B | PHE97 |
B | CYS98 |
B | CYS101 |
B | HIS102 |
F | ARG64 |
F | ILE77 |
A | LEU52 |
A | ASN53 |
A | TYR58 |
B | ARG33 |
B | TYR35 |
B | PRO36 |
B | GLU37 |
B | GLN38 |
B | PRO40 |
B | HIS62 |
B | MET74 |
B | ILE75 |
B | HIS79 |
B | ARG95 |
B | TYR96 |
site_id | AC7 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE SF4 C1801 |
Chain | Residue |
C | CYS19 |
C | CYS22 |
C | CYS26 |
C | ASN53 |
C | CYS54 |
C | GLY57 |
C | PRO194 |
site_id | AC8 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE MO C1802 |
Chain | Residue |
C | CYS152 |
C | MGD1803 |
C | MGD1804 |
site_id | AC9 |
Number of Residues | 32 |
Details | BINDING SITE FOR RESIDUE MGD C1803 |
Chain | Residue |
C | ARG20 |
C | GLN123 |
C | ASN148 |
C | CYS152 |
C | MET346 |
C | GLN350 |
C | GLN384 |
C | VAL454 |
C | ASN455 |
C | ASN456 |
C | ASN457 |
C | ALA460 |
C | SER482 |
C | ASP483 |
C | THR487 |
C | ALA499 |
C | ALA500 |
C | MET501 |
C | LYS505 |
C | ASP532 |
C | THR692 |
C | ARG694 |
C | TRP699 |
C | HIS700 |
C | SER701 |
C | SER703 |
C | TRP768 |
C | ASN776 |
C | PHE792 |
C | LYS793 |
C | MO1802 |
C | MGD1804 |
site_id | BC1 |
Number of Residues | 30 |
Details | BINDING SITE FOR RESIDUE MGD C1804 |
Chain | Residue |
C | LYS56 |
C | CYS152 |
C | TRP185 |
C | GLY186 |
C | ASN188 |
C | GLU191 |
C | MET192 |
C | SER216 |
C | THR217 |
C | HIS220 |
C | PHE232 |
C | GLY235 |
C | ASP237 |
C | THR345 |
C | MET346 |
C | GLY347 |
C | PHE348 |
C | GLY383 |
C | GLN384 |
C | GLY693 |
C | ARG694 |
C | VAL695 |
C | LEU696 |
C | HIS698 |
C | TRP699 |
C | HIS700 |
C | LYS793 |
C | LYS794 |
C | MO1802 |
C | MGD1803 |
site_id | BC2 |
Number of Residues | 12 |
Details | BINDING SITE FOR RESIDUE HEC D1128 |
Chain | Residue |
D | ARG30 |
D | PRO40 |
D | VAL41 |
D | ILE42 |
D | PRO43 |
D | HIS44 |
D | TYR49 |
D | CYS58 |
D | CYS61 |
D | HIS62 |
D | CYS98 |
D | HEC1129 |
site_id | BC3 |
Number of Residues | 21 |
Details | BINDING SITE FOR RESIDUE HEC D1129 |
Chain | Residue |
C | LEU52 |
C | ASN53 |
C | TYR58 |
D | ARG33 |
D | TYR35 |
D | PRO36 |
D | GLU37 |
D | GLN38 |
D | PRO40 |
D | HIS62 |
D | MET74 |
D | ILE75 |
D | HIS79 |
D | ARG95 |
D | PHE97 |
D | CYS98 |
D | CYS101 |
D | HIS102 |
D | HEC1128 |
H | ARG64 |
H | ILE77 |
site_id | BC4 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE SF4 E1801 |
Chain | Residue |
E | CYS19 |
E | CYS22 |
E | CYS26 |
E | CYS54 |
E | GLY57 |
E | PRO194 |
site_id | BC5 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE MO E1802 |
Chain | Residue |
E | CYS152 |
E | MGD1803 |
E | MGD1804 |
site_id | BC6 |
Number of Residues | 31 |
Details | BINDING SITE FOR RESIDUE MGD E1803 |
Chain | Residue |
E | ARG20 |
E | GLN123 |
E | ASN148 |
E | CYS152 |
E | MET346 |
E | GLN350 |
E | GLN384 |
E | VAL454 |
E | ASN455 |
E | ASN456 |
E | ALA460 |
E | SER482 |
E | ASP483 |
E | THR487 |
E | ALA499 |
E | ALA500 |
E | MET501 |
E | LYS505 |
E | ASP532 |
E | THR692 |
E | ARG694 |
E | TRP699 |
E | HIS700 |
E | SER701 |
E | SER703 |
E | TRP768 |
E | ASN776 |
E | PHE792 |
E | LYS793 |
E | MO1802 |
E | MGD1804 |
site_id | BC7 |
Number of Residues | 30 |
Details | BINDING SITE FOR RESIDUE MGD E1804 |
Chain | Residue |
E | LYS56 |
E | CYS152 |
E | TRP185 |
E | GLY186 |
E | ASN188 |
E | GLU191 |
E | MET192 |
E | SER216 |
E | THR217 |
E | HIS220 |
E | PHE232 |
E | GLY235 |
E | ASP237 |
E | THR345 |
E | MET346 |
E | GLY347 |
E | PHE348 |
E | GLY383 |
E | GLN384 |
E | GLY693 |
E | ARG694 |
E | VAL695 |
E | LEU696 |
E | HIS698 |
E | TRP699 |
E | HIS700 |
E | LYS793 |
E | LYS794 |
E | MO1802 |
E | MGD1803 |
site_id | BC8 |
Number of Residues | 11 |
Details | BINDING SITE FOR RESIDUE HEC F1128 |
Chain | Residue |
F | ARG30 |
F | VAL41 |
F | ILE42 |
F | PRO43 |
F | HIS44 |
F | TYR49 |
F | ARG57 |
F | CYS58 |
F | CYS61 |
F | HIS62 |
F | HEC1129 |
site_id | BC9 |
Number of Residues | 22 |
Details | BINDING SITE FOR RESIDUE HEC F1129 |
Chain | Residue |
B | ARG64 |
B | TYR66 |
B | ILE77 |
E | LEU52 |
E | ASN53 |
E | TYR58 |
F | ARG33 |
F | TYR35 |
F | PRO36 |
F | GLU37 |
F | GLN38 |
F | PRO40 |
F | HIS62 |
F | MET74 |
F | ILE75 |
F | HIS79 |
F | ARG95 |
F | PHE97 |
F | CYS98 |
F | CYS101 |
F | HIS102 |
F | HEC1128 |
site_id | CC1 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE SF4 G1801 |
Chain | Residue |
G | CYS19 |
G | CYS22 |
G | CYS26 |
G | CYS54 |
G | PRO194 |
site_id | CC2 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE MO G1802 |
Chain | Residue |
G | CYS152 |
G | MGD1803 |
G | MGD1804 |
site_id | CC3 |
Number of Residues | 32 |
Details | BINDING SITE FOR RESIDUE MGD G1803 |
Chain | Residue |
G | ARG20 |
G | GLN123 |
G | ASN148 |
G | CYS152 |
G | MET346 |
G | GLN350 |
G | GLN384 |
G | VAL454 |
G | ASN455 |
G | ASN456 |
G | ASN457 |
G | ALA460 |
G | SER482 |
G | ASP483 |
G | THR487 |
G | ALA499 |
G | ALA500 |
G | MET501 |
G | LYS505 |
G | ASP532 |
G | THR692 |
G | ARG694 |
G | TRP699 |
G | HIS700 |
G | SER701 |
G | SER703 |
G | TRP768 |
G | ASN776 |
G | PHE792 |
G | LYS793 |
G | MO1802 |
G | MGD1804 |
site_id | CC4 |
Number of Residues | 30 |
Details | BINDING SITE FOR RESIDUE MGD G1804 |
Chain | Residue |
G | LYS56 |
G | CYS152 |
G | TRP185 |
G | GLY186 |
G | SER187 |
G | ASN188 |
G | GLU191 |
G | MET192 |
G | SER216 |
G | THR217 |
G | HIS220 |
G | GLY235 |
G | ASP237 |
G | THR345 |
G | MET346 |
G | GLY347 |
G | PHE348 |
G | GLY383 |
G | GLN384 |
G | GLY693 |
G | ARG694 |
G | VAL695 |
G | LEU696 |
G | HIS698 |
G | TRP699 |
G | HIS700 |
G | LYS793 |
G | LYS794 |
G | MO1802 |
G | MGD1803 |
site_id | CC5 |
Number of Residues | 14 |
Details | BINDING SITE FOR RESIDUE HEC H1128 |
Chain | Residue |
H | ARG30 |
H | ARG33 |
H | PRO40 |
H | VAL41 |
H | ILE42 |
H | PRO43 |
H | HIS44 |
H | TYR49 |
H | ARG57 |
H | CYS58 |
H | CYS61 |
H | HIS62 |
H | HIS102 |
H | HEC1129 |
site_id | CC6 |
Number of Residues | 21 |
Details | BINDING SITE FOR RESIDUE HEC H1129 |
Chain | Residue |
D | ARG64 |
D | TYR66 |
D | ILE77 |
G | LEU52 |
G | ASN53 |
G | TYR58 |
H | ARG33 |
H | TYR35 |
H | PRO36 |
H | GLU37 |
H | GLN38 |
H | PRO40 |
H | HIS62 |
H | MET74 |
H | ILE75 |
H | HIS79 |
H | ARG95 |
H | CYS98 |
H | CYS101 |
H | HIS102 |
H | HEC1128 |
site_id | CC7 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE SF4 I1801 |
Chain | Residue |
I | CYS19 |
I | PHE21 |
I | CYS22 |
I | GLY25 |
I | CYS26 |
I | CYS54 |
I | PRO194 |
site_id | CC8 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE MO I1802 |
Chain | Residue |
I | CYS152 |
I | MGD1803 |
I | MGD1804 |
site_id | CC9 |
Number of Residues | 32 |
Details | BINDING SITE FOR RESIDUE MGD I1803 |
Chain | Residue |
I | ARG20 |
I | GLN123 |
I | ASN148 |
I | CYS152 |
I | MET346 |
I | GLN350 |
I | GLN384 |
I | VAL454 |
I | ASN455 |
I | ASN456 |
I | ASN457 |
I | ALA460 |
I | SER482 |
I | ASP483 |
I | THR487 |
I | ALA499 |
I | ALA500 |
I | MET501 |
I | LYS505 |
I | ASP532 |
I | THR692 |
I | ARG694 |
I | TRP699 |
I | HIS700 |
I | SER701 |
I | SER703 |
I | TRP768 |
I | ASN776 |
I | PHE792 |
I | LYS793 |
I | MO1802 |
I | MGD1804 |
site_id | DC1 |
Number of Residues | 31 |
Details | BINDING SITE FOR RESIDUE MGD I1804 |
Chain | Residue |
I | LYS56 |
I | CYS152 |
I | TRP185 |
I | GLY186 |
I | SER187 |
I | ASN188 |
I | GLU191 |
I | MET192 |
I | SER216 |
I | THR217 |
I | HIS220 |
I | PHE232 |
I | GLY235 |
I | ASP237 |
I | THR345 |
I | MET346 |
I | GLY347 |
I | PHE348 |
I | GLY383 |
I | GLN384 |
I | GLY693 |
I | ARG694 |
I | VAL695 |
I | LEU696 |
I | HIS698 |
I | TRP699 |
I | HIS700 |
I | LYS793 |
I | LYS794 |
I | MO1802 |
I | MGD1803 |
site_id | DC2 |
Number of Residues | 13 |
Details | BINDING SITE FOR RESIDUE HEC J1128 |
Chain | Residue |
J | ARG30 |
J | ARG33 |
J | PRO40 |
J | VAL41 |
J | ILE42 |
J | PRO43 |
J | HIS44 |
J | TYR49 |
J | ARG57 |
J | CYS58 |
J | CYS61 |
J | HIS62 |
J | HEC1129 |
site_id | DC3 |
Number of Residues | 23 |
Details | BINDING SITE FOR RESIDUE HEC J1129 |
Chain | Residue |
I | LEU52 |
I | TYR58 |
J | ARG33 |
J | TYR35 |
J | PRO36 |
J | GLU37 |
J | GLN38 |
J | PRO40 |
J | LEU59 |
J | HIS62 |
J | MET74 |
J | ILE75 |
J | SER76 |
J | HIS79 |
J | ARG95 |
J | PHE97 |
J | CYS98 |
J | CYS101 |
J | HIS102 |
J | HEC1128 |
P | ARG64 |
P | TYR66 |
P | ILE77 |
site_id | DC4 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE SF4 K1801 |
Chain | Residue |
K | CYS19 |
K | CYS22 |
K | CYS26 |
K | CYS54 |
K | GLY57 |
K | PRO194 |
site_id | DC5 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE MO K1802 |
Chain | Residue |
K | CYS152 |
K | MGD1803 |
K | MGD1804 |
site_id | DC6 |
Number of Residues | 31 |
Details | BINDING SITE FOR RESIDUE MGD K1803 |
Chain | Residue |
K | ARG20 |
K | GLN123 |
K | ASN148 |
K | CYS152 |
K | GLN350 |
K | GLN384 |
K | VAL454 |
K | ASN455 |
K | ASN456 |
K | ASN457 |
K | ALA460 |
K | SER482 |
K | ASP483 |
K | THR487 |
K | ALA499 |
K | ALA500 |
K | MET501 |
K | LYS505 |
K | ASP532 |
K | THR692 |
K | ARG694 |
K | TRP699 |
K | HIS700 |
K | SER701 |
K | SER703 |
K | TRP768 |
K | ASN776 |
K | PHE792 |
K | LYS793 |
K | MO1802 |
K | MGD1804 |
site_id | DC7 |
Number of Residues | 31 |
Details | BINDING SITE FOR RESIDUE MGD K1804 |
Chain | Residue |
K | LYS56 |
K | CYS152 |
K | TRP185 |
K | GLY186 |
K | SER187 |
K | ASN188 |
K | GLU191 |
K | MET192 |
K | SER216 |
K | THR217 |
K | HIS220 |
K | PHE232 |
K | GLY235 |
K | ASP237 |
K | THR345 |
K | MET346 |
K | GLY347 |
K | PHE348 |
K | GLY383 |
K | GLN384 |
K | GLY693 |
K | ARG694 |
K | VAL695 |
K | LEU696 |
K | HIS698 |
K | TRP699 |
K | HIS700 |
K | LYS793 |
K | LYS794 |
K | MO1802 |
K | MGD1803 |
site_id | DC8 |
Number of Residues | 14 |
Details | BINDING SITE FOR RESIDUE HEC L1128 |
Chain | Residue |
L | ARG30 |
L | ARG33 |
L | PRO40 |
L | VAL41 |
L | ILE42 |
L | PRO43 |
L | HIS44 |
L | TYR49 |
L | ARG57 |
L | CYS58 |
L | CYS61 |
L | HIS62 |
L | HIS102 |
L | HEC1129 |
site_id | DC9 |
Number of Residues | 22 |
Details | BINDING SITE FOR RESIDUE HEC L1129 |
Chain | Residue |
K | LEU52 |
K | ASN53 |
K | TYR58 |
L | ARG33 |
L | TYR35 |
L | PRO36 |
L | GLU37 |
L | GLN38 |
L | PRO40 |
L | HIS62 |
L | MET74 |
L | ILE75 |
L | HIS79 |
L | ARG95 |
L | PHE97 |
L | CYS98 |
L | CYS101 |
L | HIS102 |
L | HEC1128 |
N | ARG64 |
N | TYR66 |
N | ILE77 |
site_id | EC1 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE SF4 M1801 |
Chain | Residue |
M | CYS19 |
M | CYS22 |
M | CYS26 |
M | CYS54 |
M | GLY57 |
M | PRO194 |
site_id | EC2 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE MO M1802 |
Chain | Residue |
M | CYS152 |
M | MGD1803 |
M | MGD1804 |
site_id | EC3 |
Number of Residues | 32 |
Details | BINDING SITE FOR RESIDUE MGD M1803 |
Chain | Residue |
M | ARG20 |
M | GLN123 |
M | ASN148 |
M | CYS152 |
M | MET346 |
M | GLN350 |
M | GLN384 |
M | VAL454 |
M | ASN455 |
M | ASN456 |
M | ASN457 |
M | ALA460 |
M | SER482 |
M | ASP483 |
M | THR487 |
M | ALA499 |
M | ALA500 |
M | MET501 |
M | LYS505 |
M | ASP532 |
M | THR692 |
M | ARG694 |
M | TRP699 |
M | HIS700 |
M | SER701 |
M | SER703 |
M | TRP768 |
M | ASN776 |
M | PHE792 |
M | LYS793 |
M | MO1802 |
M | MGD1804 |
site_id | EC4 |
Number of Residues | 31 |
Details | BINDING SITE FOR RESIDUE MGD M1804 |
Chain | Residue |
M | LYS56 |
M | CYS152 |
M | TRP185 |
M | GLY186 |
M | SER187 |
M | ASN188 |
M | GLU191 |
M | MET192 |
M | SER216 |
M | THR217 |
M | HIS220 |
M | PHE232 |
M | GLY235 |
M | ASP237 |
M | THR345 |
M | MET346 |
M | GLY347 |
M | PHE348 |
M | GLY383 |
M | GLN384 |
M | GLY693 |
M | ARG694 |
M | VAL695 |
M | LEU696 |
M | HIS698 |
M | TRP699 |
M | HIS700 |
M | LYS793 |
M | LYS794 |
M | MO1802 |
M | MGD1803 |
site_id | EC5 |
Number of Residues | 14 |
Details | BINDING SITE FOR RESIDUE HEC N1128 |
Chain | Residue |
N | ARG30 |
N | ARG33 |
N | PRO40 |
N | VAL41 |
N | ILE42 |
N | PRO43 |
N | HIS44 |
N | TYR49 |
N | ARG57 |
N | CYS58 |
N | CYS61 |
N | HIS62 |
N | HIS102 |
N | HEC1129 |
site_id | EC6 |
Number of Residues | 20 |
Details | BINDING SITE FOR RESIDUE HEC N1129 |
Chain | Residue |
L | ARG64 |
L | ILE77 |
M | LEU52 |
M | ASN53 |
M | TYR58 |
N | ARG33 |
N | PRO36 |
N | GLU37 |
N | GLN38 |
N | PRO40 |
N | HIS62 |
N | MET74 |
N | ILE75 |
N | HIS79 |
N | ARG95 |
N | PHE97 |
N | CYS98 |
N | CYS101 |
N | HIS102 |
N | HEC1128 |
site_id | EC7 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE SF4 O1801 |
Chain | Residue |
O | CYS19 |
O | CYS22 |
O | CYS26 |
O | ASN53 |
O | CYS54 |
O | GLY57 |
O | PRO194 |
site_id | EC8 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE MO O1802 |
Chain | Residue |
O | CYS152 |
O | MGD1803 |
O | MGD1804 |
site_id | EC9 |
Number of Residues | 32 |
Details | BINDING SITE FOR RESIDUE MGD O1803 |
Chain | Residue |
O | ARG20 |
O | GLN123 |
O | ASN148 |
O | CYS152 |
O | MET346 |
O | GLN350 |
O | GLN384 |
O | VAL454 |
O | ASN455 |
O | ASN456 |
O | ASN457 |
O | ALA460 |
O | SER482 |
O | ASP483 |
O | THR487 |
O | ALA499 |
O | ALA500 |
O | MET501 |
O | LYS505 |
O | ASP532 |
O | THR692 |
O | ARG694 |
O | TRP699 |
O | HIS700 |
O | SER701 |
O | SER703 |
O | TRP768 |
O | ASN776 |
O | PHE792 |
O | LYS793 |
O | MO1802 |
O | MGD1804 |
site_id | FC1 |
Number of Residues | 31 |
Details | BINDING SITE FOR RESIDUE MGD O1804 |
Chain | Residue |
O | LYS56 |
O | CYS152 |
O | TRP185 |
O | GLY186 |
O | SER187 |
O | ASN188 |
O | GLU191 |
O | MET192 |
O | SER216 |
O | THR217 |
O | HIS220 |
O | PHE232 |
O | GLY235 |
O | ASP237 |
O | THR345 |
O | MET346 |
O | GLY347 |
O | PHE348 |
O | GLY383 |
O | GLN384 |
O | GLY693 |
O | ARG694 |
O | VAL695 |
O | LEU696 |
O | HIS698 |
O | TRP699 |
O | HIS700 |
O | LYS793 |
O | LYS794 |
O | MO1802 |
O | MGD1803 |
site_id | FC2 |
Number of Residues | 14 |
Details | BINDING SITE FOR RESIDUE HEC P1128 |
Chain | Residue |
P | ARG30 |
P | ARG33 |
P | VAL41 |
P | ILE42 |
P | PRO43 |
P | HIS44 |
P | TYR49 |
P | ARG57 |
P | CYS58 |
P | CYS61 |
P | HIS62 |
P | CYS98 |
P | HIS102 |
P | HEC1129 |
site_id | FC3 |
Number of Residues | 22 |
Details | BINDING SITE FOR RESIDUE HEC P1129 |
Chain | Residue |
J | ARG64 |
J | TYR66 |
J | ILE77 |
O | LEU52 |
O | ASN53 |
O | TYR58 |
P | ARG33 |
P | TYR35 |
P | PRO36 |
P | GLU37 |
P | GLN38 |
P | PRO40 |
P | HIS62 |
P | MET74 |
P | ILE75 |
P | HIS79 |
P | ARG95 |
P | PHE97 |
P | CYS98 |
P | CYS101 |
P | HIS102 |
P | HEC1128 |
Functional Information from PROSITE/UniProt
site_id | PS00551 |
Number of Residues | 18 |
Details | MOLYBDOPTERIN_PROK_1 Prokaryotic molybdopterin oxidoreductases signature 1. ApCrf.CGTgCgVmVgtr.D |
Chain | Residue | Details |
A | ALA17-ASP34 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 32 |
Details | BINDING: axial binding residue |
Chain | Residue | Details |
B | HIS44 | |
F | HIS62 | |
K | LYS56 | |
K | GLN123 | |
K | ASN148 | |
K | CYS152 | |
K | TRP185 | |
K | GLY235 | |
K | MET346 | |
K | GLN350 | |
K | ASN456 | |
K | SER482 | |
F | HIS79 | |
K | LYS505 | |
K | ASP532 | |
K | THR692 | |
K | ASN776 | |
K | LYS793 | |
M | CYS19 | |
M | CYS22 | |
M | CYS26 | |
M | CYS54 | |
M | LYS56 | |
F | HIS102 | |
M | GLN123 | |
M | ASN148 | |
M | CYS152 | |
M | TRP185 | |
M | GLY235 | |
M | MET346 | |
M | GLN350 | |
M | ASN456 | |
M | SER482 | |
M | LYS505 | |
H | HIS44 | |
M | ASP532 | |
M | THR692 | |
M | ASN776 | |
M | LYS793 | |
O | CYS19 | |
O | CYS22 | |
O | CYS26 | |
O | CYS54 | |
O | LYS56 | |
O | GLN123 | |
H | HIS62 | |
O | ASN148 | |
O | CYS152 | |
O | TRP185 | |
O | GLY235 | |
O | MET346 | |
O | GLN350 | |
O | ASN456 | |
O | SER482 | |
O | LYS505 | |
O | ASP532 | |
H | HIS79 | |
O | THR692 | |
O | ASN776 | |
O | LYS793 | |
H | HIS102 | |
J | HIS44 | |
J | HIS62 | |
J | HIS79 | |
B | HIS62 | |
J | HIS102 | |
L | HIS44 | |
L | HIS62 | |
L | HIS79 | |
L | HIS102 | |
N | HIS44 | |
N | HIS62 | |
N | HIS79 | |
N | HIS102 | |
P | HIS44 | |
B | HIS79 | |
P | HIS62 | |
P | HIS79 | |
P | HIS102 | |
C | SER482 | |
C | LYS505 | |
C | ASP532 | |
C | THR692 | |
C | ASN776 | |
C | LYS793 | |
E | CYS19 | |
B | HIS102 | |
E | CYS22 | |
E | CYS26 | |
E | CYS54 | |
E | LYS56 | |
E | GLN123 | |
E | ASN148 | |
E | CYS152 | |
E | TRP185 | |
E | GLY235 | |
E | MET346 | |
D | HIS44 | |
E | GLN350 | |
E | ASN456 | |
E | SER482 | |
E | LYS505 | |
E | ASP532 | |
E | THR692 | |
E | ASN776 | |
E | LYS793 | |
G | CYS19 | |
G | CYS22 | |
D | HIS62 | |
G | CYS26 | |
G | CYS54 | |
G | LYS56 | |
G | GLN123 | |
G | ASN148 | |
G | CYS152 | |
G | TRP185 | |
G | GLY235 | |
G | MET346 | |
G | GLN350 | |
D | HIS79 | |
G | ASN456 | |
G | SER482 | |
G | LYS505 | |
G | ASP532 | |
G | THR692 | |
G | ASN776 | |
G | LYS793 | |
I | CYS19 | |
I | CYS22 | |
I | CYS26 | |
D | HIS102 | |
I | CYS54 | |
I | LYS56 | |
I | GLN123 | |
I | ASN148 | |
I | CYS152 | |
I | TRP185 | |
I | GLY235 | |
I | MET346 | |
I | GLN350 | |
I | ASN456 | |
F | HIS44 | |
I | SER482 | |
I | LYS505 | |
I | ASP532 | |
I | THR692 | |
I | ASN776 | |
I | LYS793 | |
K | CYS19 | |
K | CYS22 | |
K | CYS26 | |
K | CYS54 |
site_id | SWS_FT_FI2 |
Number of Residues | 32 |
Details | BINDING: covalent => ECO:0000269|PubMed:14528294 |
Chain | Residue | Details |
B | CYS58 | |
F | CYS61 | |
F | CYS98 | |
F | CYS101 | |
H | CYS58 | |
H | CYS61 | |
H | CYS98 | |
H | CYS101 | |
J | CYS58 | |
J | CYS61 | |
J | CYS98 | |
B | CYS61 | |
J | CYS101 | |
L | CYS58 | |
L | CYS61 | |
L | CYS98 | |
L | CYS101 | |
N | CYS58 | |
N | CYS61 | |
N | CYS98 | |
N | CYS101 | |
P | CYS58 | |
B | CYS98 | |
P | CYS61 | |
P | CYS98 | |
P | CYS101 | |
B | CYS101 | |
D | CYS58 | |
D | CYS61 | |
D | CYS98 | |
D | CYS101 | |
F | CYS58 |
site_id | SWS_FT_FI3 |
Number of Residues | 8 |
Details | MOD_RES: Pyrrolidone carboxylic acid => ECO:0000255 |
Chain | Residue | Details |
B | GLN1 | |
D | GLN1 | |
F | GLN1 | |
H | GLN1 | |
J | GLN1 | |
L | GLN1 | |
N | GLN1 | |
P | GLN1 |
Catalytic Information from CSA
site_id | CSA1 |
Number of Residues | 1 |
Details | Annotated By Reference To The Literature 1tmo |
Chain | Residue | Details |
A | CYS152 |
site_id | CSA2 |
Number of Residues | 1 |
Details | Annotated By Reference To The Literature 1tmo |
Chain | Residue | Details |
C | CYS152 |
site_id | CSA3 |
Number of Residues | 1 |
Details | Annotated By Reference To The Literature 1tmo |
Chain | Residue | Details |
E | CYS152 |
site_id | CSA4 |
Number of Residues | 1 |
Details | Annotated By Reference To The Literature 1tmo |
Chain | Residue | Details |
G | CYS152 |
site_id | CSA5 |
Number of Residues | 1 |
Details | Annotated By Reference To The Literature 1tmo |
Chain | Residue | Details |
I | CYS152 |
site_id | CSA6 |
Number of Residues | 1 |
Details | Annotated By Reference To The Literature 1tmo |
Chain | Residue | Details |
K | CYS152 |
site_id | CSA7 |
Number of Residues | 1 |
Details | Annotated By Reference To The Literature 1tmo |
Chain | Residue | Details |
M | CYS152 |
site_id | CSA8 |
Number of Residues | 1 |
Details | Annotated By Reference To The Literature 1tmo |
Chain | Residue | Details |
O | CYS152 |
site_id | MCSA1 |
Number of Residues | 6 |
Details | M-CSA 276 |
Chain | Residue | Details |
A | LYS56 | activator, hydrogen bond donor, single electron acceptor, single electron donor, single electron relay |
A | CYS152 | activator, covalently attached, electrostatic stabiliser, metal ligand, nucleofuge, nucleophile |
A | MET153 | electrostatic stabiliser, polar/non-polar interaction, steric role |
A | MET346 | electrostatic stabiliser, polar/non-polar interaction, steric role |
A | GLY383 | electrostatic stabiliser, hydrogen bond acceptor, hydrogen bond donor |
A | GLN384 | electrostatic stabiliser, hydrogen bond acceptor |
site_id | MCSA2 |
Number of Residues | 6 |
Details | M-CSA 276 |
Chain | Residue | Details |
C | LYS56 | activator, hydrogen bond donor, single electron acceptor, single electron donor, single electron relay |
C | CYS152 | activator, covalently attached, electrostatic stabiliser, metal ligand, nucleofuge, nucleophile |
C | MET153 | electrostatic stabiliser, polar/non-polar interaction, steric role |
C | MET346 | electrostatic stabiliser, polar/non-polar interaction, steric role |
C | GLY383 | electrostatic stabiliser, hydrogen bond acceptor, hydrogen bond donor |
C | GLN384 | electrostatic stabiliser, hydrogen bond acceptor |
site_id | MCSA3 |
Number of Residues | 6 |
Details | M-CSA 276 |
Chain | Residue | Details |
E | LYS56 | activator, hydrogen bond donor, single electron acceptor, single electron donor, single electron relay |
E | CYS152 | activator, covalently attached, electrostatic stabiliser, metal ligand, nucleofuge, nucleophile |
E | MET153 | electrostatic stabiliser, polar/non-polar interaction, steric role |
E | MET346 | electrostatic stabiliser, polar/non-polar interaction, steric role |
E | GLY383 | electrostatic stabiliser, hydrogen bond acceptor, hydrogen bond donor |
E | GLN384 | electrostatic stabiliser, hydrogen bond acceptor |
site_id | MCSA4 |
Number of Residues | 6 |
Details | M-CSA 276 |
Chain | Residue | Details |
G | LYS56 | activator, hydrogen bond donor, single electron acceptor, single electron donor, single electron relay |
G | CYS152 | activator, covalently attached, electrostatic stabiliser, metal ligand, nucleofuge, nucleophile |
G | MET153 | electrostatic stabiliser, polar/non-polar interaction, steric role |
G | MET346 | electrostatic stabiliser, polar/non-polar interaction, steric role |
G | GLY383 | electrostatic stabiliser, hydrogen bond acceptor, hydrogen bond donor |
G | GLN384 | electrostatic stabiliser, hydrogen bond acceptor |
site_id | MCSA5 |
Number of Residues | 6 |
Details | M-CSA 276 |
Chain | Residue | Details |
I | LYS56 | activator, hydrogen bond donor, single electron acceptor, single electron donor, single electron relay |
I | CYS152 | activator, covalently attached, electrostatic stabiliser, metal ligand, nucleofuge, nucleophile |
I | MET153 | electrostatic stabiliser, polar/non-polar interaction, steric role |
I | MET346 | electrostatic stabiliser, polar/non-polar interaction, steric role |
I | GLY383 | electrostatic stabiliser, hydrogen bond acceptor, hydrogen bond donor |
I | GLN384 | electrostatic stabiliser, hydrogen bond acceptor |
site_id | MCSA6 |
Number of Residues | 6 |
Details | M-CSA 276 |
Chain | Residue | Details |
K | LYS56 | activator, hydrogen bond donor, single electron acceptor, single electron donor, single electron relay |
K | CYS152 | activator, covalently attached, electrostatic stabiliser, metal ligand, nucleofuge, nucleophile |
K | MET153 | electrostatic stabiliser, polar/non-polar interaction, steric role |
K | MET346 | electrostatic stabiliser, polar/non-polar interaction, steric role |
K | GLY383 | electrostatic stabiliser, hydrogen bond acceptor, hydrogen bond donor |
K | GLN384 | electrostatic stabiliser, hydrogen bond acceptor |
site_id | MCSA7 |
Number of Residues | 6 |
Details | M-CSA 276 |
Chain | Residue | Details |
M | LYS56 | activator, hydrogen bond donor, single electron acceptor, single electron donor, single electron relay |
M | CYS152 | activator, covalently attached, electrostatic stabiliser, metal ligand, nucleofuge, nucleophile |
M | MET153 | electrostatic stabiliser, polar/non-polar interaction, steric role |
M | MET346 | electrostatic stabiliser, polar/non-polar interaction, steric role |
M | GLY383 | electrostatic stabiliser, hydrogen bond acceptor, hydrogen bond donor |
M | GLN384 | electrostatic stabiliser, hydrogen bond acceptor |
site_id | MCSA8 |
Number of Residues | 6 |
Details | M-CSA 276 |
Chain | Residue | Details |
O | LYS56 | activator, hydrogen bond donor, single electron acceptor, single electron donor, single electron relay |
O | CYS152 | activator, covalently attached, electrostatic stabiliser, metal ligand, nucleofuge, nucleophile |
O | MET153 | electrostatic stabiliser, polar/non-polar interaction, steric role |
O | MET346 | electrostatic stabiliser, polar/non-polar interaction, steric role |
O | GLY383 | electrostatic stabiliser, hydrogen bond acceptor, hydrogen bond donor |
O | GLN384 | electrostatic stabiliser, hydrogen bond acceptor |