1O9R
The X-ray crystal structure of Agrobacterium tumefaciens Dps, a member of the family that protect DNA without binding
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0005737 | cellular_component | cytoplasm |
| A | 0006879 | biological_process | intracellular iron ion homeostasis |
| A | 0008199 | molecular_function | ferric iron binding |
| A | 0016491 | molecular_function | oxidoreductase activity |
| A | 0016722 | molecular_function | oxidoreductase activity, acting on metal ions |
| A | 0046872 | molecular_function | metal ion binding |
| B | 0005737 | cellular_component | cytoplasm |
| B | 0006879 | biological_process | intracellular iron ion homeostasis |
| B | 0008199 | molecular_function | ferric iron binding |
| B | 0016491 | molecular_function | oxidoreductase activity |
| B | 0016722 | molecular_function | oxidoreductase activity, acting on metal ions |
| B | 0046872 | molecular_function | metal ion binding |
| C | 0005737 | cellular_component | cytoplasm |
| C | 0006879 | biological_process | intracellular iron ion homeostasis |
| C | 0008199 | molecular_function | ferric iron binding |
| C | 0016491 | molecular_function | oxidoreductase activity |
| C | 0016722 | molecular_function | oxidoreductase activity, acting on metal ions |
| C | 0046872 | molecular_function | metal ion binding |
| D | 0005737 | cellular_component | cytoplasm |
| D | 0006879 | biological_process | intracellular iron ion homeostasis |
| D | 0008199 | molecular_function | ferric iron binding |
| D | 0016491 | molecular_function | oxidoreductase activity |
| D | 0016722 | molecular_function | oxidoreductase activity, acting on metal ions |
| D | 0046872 | molecular_function | metal ion binding |
| E | 0005737 | cellular_component | cytoplasm |
| E | 0006879 | biological_process | intracellular iron ion homeostasis |
| E | 0008199 | molecular_function | ferric iron binding |
| E | 0016491 | molecular_function | oxidoreductase activity |
| E | 0016722 | molecular_function | oxidoreductase activity, acting on metal ions |
| E | 0046872 | molecular_function | metal ion binding |
| F | 0005737 | cellular_component | cytoplasm |
| F | 0006879 | biological_process | intracellular iron ion homeostasis |
| F | 0008199 | molecular_function | ferric iron binding |
| F | 0016491 | molecular_function | oxidoreductase activity |
| F | 0016722 | molecular_function | oxidoreductase activity, acting on metal ions |
| F | 0046872 | molecular_function | metal ion binding |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE FE A1163 |
| Chain | Residue |
| A | ASP67 |
| A | GLU71 |
| B | HIS40 |
| B | HOH2036 |
| B | HOH2045 |
| site_id | AC2 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE FE B1163 |
| Chain | Residue |
| B | GLU71 |
| A | HIS40 |
| A | HOH2041 |
| A | HOH2046 |
| B | ASP67 |
| site_id | AC3 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE FE C1163 |
| Chain | Residue |
| C | HIS40 |
| C | ASP67 |
| C | GLU71 |
| C | HOH2032 |
| C | HOH2037 |
| site_id | AC4 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE FE D1163 |
| Chain | Residue |
| D | HIS40 |
| D | ASP67 |
| D | GLU71 |
| D | HOH2036 |
| D | HOH2048 |
| site_id | AC5 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE FE E1163 |
| Chain | Residue |
| E | ASP67 |
| E | GLU71 |
| E | HOH2050 |
| F | HIS40 |
| F | HOH2034 |
| F | HOH2043 |
| site_id | AC6 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE FE F1163 |
| Chain | Residue |
| E | HIS40 |
| E | HOH2028 |
| E | HOH2035 |
| F | ASP67 |
| F | GLU71 |
| F | HOH2057 |
| site_id | AC7 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE TRS B1164 |
| Chain | Residue |
| B | ASP138 |
| B | HOH2132 |
| B | HOH2133 |
| B | HOH2134 |
| D | ASP138 |
| F | ASP138 |
| F | ARG145 |
| site_id | AC8 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE EDO D1164 |
| Chain | Residue |
| D | ILE30 |
| D | ARG59 |
| D | ASP63 |
| D | ASP67 |
| D | HOH2115 |
| site_id | AC9 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE TRS E1164 |
| Chain | Residue |
| A | ASP138 |
| C | ASP138 |
| E | ASP138 |
| E | HOH2114 |
| E | HOH2115 |
| E | HOH2116 |
Functional Information from PROSITE/UniProt
| site_id | PS00818 |
| Number of Residues | 17 |
| Details | DPS_1 Dps protein family signature 1. HWnLkGpqfiaVHellD |
| Chain | Residue | Details |
| A | HIS40-ASP56 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 12 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"12660233","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 6 |
| Details | Binding site: {"evidences":[{"evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
