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1O7W

NAPHTHALENE 1,2-DIOXYGENASE, FULLY REDUCED FORM

Functional Information from GO Data
ChainGOidnamespacecontents
A0005506molecular_functioniron ion binding
A0005515molecular_functionprotein binding
A0018625molecular_functionnaphthalene 1,2-dioxygenase activity
A0019439biological_processobsolete aromatic compound catabolic process
A0044237biological_processcellular metabolic process
A0046872molecular_functionmetal ion binding
A0051213molecular_functiondioxygenase activity
A0051537molecular_function2 iron, 2 sulfur cluster binding
B0005515molecular_functionprotein binding
B0006725biological_processobsolete cellular aromatic compound metabolic process
B0019380biological_process3-phenylpropionate catabolic process
B0019439biological_processobsolete aromatic compound catabolic process
B0051213molecular_functiondioxygenase activity
Functional Information from PDB Data
site_idAC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 A1451
ChainResidue
ALEU128
AASN129
ALYS130
ALYS131

site_idAC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE FE A1453
ChainResidue
AHIS208
AHIS213
AASP362
AHOH2144

site_idAC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 B1697
ChainResidue
BGLN565
BHOH2054
BHOH2125
BGLN563

site_idAC4
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 B1698
ChainResidue
BGLY559
BSER560
BGLU561
BGLU667
BLYS672

site_idAC5
Number of Residues9
DetailsBINDING SITE FOR RESIDUE EDO A1448
ChainResidue
ALEU31
APHE35
AMET59
AGLY60
AILE61
AASP62
APHE152
ATYR376
AGLN377

site_idAC6
Number of Residues8
DetailsBINDING SITE FOR RESIDUE EDO A1449
ChainResidue
AHIS18
AVAL80
ACYS81
AARG82
ASER381
AASP382
AHOH2251
AHOH2252

site_idAC7
Number of Residues4
DetailsBINDING SITE FOR RESIDUE EDO A1450
ChainResidue
AARG342
AASP346
AHOH2138
BASN582

site_idAC8
Number of Residues7
DetailsBINDING SITE FOR RESIDUE FES A1452
ChainResidue
ACYS81
AHIS83
AARG84
ACYS101
ATYR103
AHIS104
ATRP106

site_idAC9
Number of Residues7
DetailsBINDING SITE FOR RESIDUE EDO B1695
ChainResidue
BTYR588
BGLN602
BMET691
BVAL692
BPHE693
BHOH2123
BHOH2124

site_idBC1
Number of Residues7
DetailsBINDING SITE FOR RESIDUE EDO B1696
ChainResidue
AALA50
AASP53
AHOH2044
BARG578
BTYR579
BLYS580
BLEU581

site_idBC2
Number of Residues8
DetailsBINDING SITE FOR RESIDUE EDO B1699
ChainResidue
BARG638
BALA658
BGLU660
BPHE677
BVAL678
BASP679
BHOH2107
BHOH2126

Functional Information from PROSITE/UniProt
site_idPS00570
Number of Residues24
DetailsRING_HYDROXYL_ALPHA Bacterial ring hydroxylating dioxygenases alpha-subunit signature. CrHRGktlvsveaGNakgfvCsYH
ChainResidueDetails
ACYS81-HIS104

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues6
DetailsBINDING: BINDING => ECO:0000269|PubMed:10669618, ECO:0000269|PubMed:12586937, ECO:0000269|PubMed:15942729, ECO:0000269|PubMed:9634695, ECO:0007744|PDB:1EG9, ECO:0007744|PDB:1NDO, ECO:0007744|PDB:1O7G, ECO:0007744|PDB:1O7H, ECO:0007744|PDB:1O7M, ECO:0007744|PDB:1O7N, ECO:0007744|PDB:1O7P, ECO:0007744|PDB:1O7W, ECO:0007744|PDB:1UUV, ECO:0007744|PDB:1UUW
ChainResidueDetails
ACYS81
AHIS83
ACYS101
AHIS104
AHIS208
AHIS213

site_idSWS_FT_FI2
Number of Residues1
DetailsBINDING: BINDING => ECO:0000269|PubMed:10669618, ECO:0000269|PubMed:12586937, ECO:0000269|PubMed:15942729, ECO:0000269|PubMed:9634695, ECO:0007744|PDB:1EG9, ECO:0007744|PDB:1NDO, ECO:0007744|PDB:1O7G, ECO:0007744|PDB:1O7H, ECO:0007744|PDB:1O7M, ECO:0007744|PDB:1O7N, ECO:0007744|PDB:1O7P, ECO:0007744|PDB:1O7W, ECO:0007744|PDB:1UUV
ChainResidueDetails
AASP362

site_idSWS_FT_FI3
Number of Residues1
DetailsSITE: Important for enantioselectivity => ECO:0000269|PubMed:10692370
ChainResidueDetails
APHE352

Catalytic Information from CSA
site_idCSA1
Number of Residues2
DetailsAnnotated By Reference To The Literature 1ndo
ChainResidueDetails
AHIS208
AASP205

site_idCSA2
Number of Residues1
DetailsAnnotated By Reference To The Literature 1ndo
ChainResidueDetails
AHIS104

site_idMCSA1
Number of Residues5
DetailsM-CSA 130
ChainResidueDetails
AHIS104single electron acceptor, single electron donor, single electron relay
AASP205single electron acceptor, single electron donor, single electron relay
AHIS208metal ligand, single electron acceptor, single electron donor, single electron relay
AHIS213metal ligand
AASP362metal ligand

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PDB entries from 2024-05-01

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