1NYT
SHIKIMATE DEHYDROGENASE AroE COMPLEXED WITH NADP+
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0000166 | molecular_function | nucleotide binding |
A | 0004764 | molecular_function | shikimate 3-dehydrogenase (NADP+) activity |
A | 0005515 | molecular_function | protein binding |
A | 0005829 | cellular_component | cytosol |
A | 0008652 | biological_process | amino acid biosynthetic process |
A | 0009073 | biological_process | aromatic amino acid family biosynthetic process |
A | 0009423 | biological_process | chorismate biosynthetic process |
A | 0016491 | molecular_function | oxidoreductase activity |
A | 0019632 | biological_process | shikimate metabolic process |
A | 0050661 | molecular_function | NADP binding |
B | 0000166 | molecular_function | nucleotide binding |
B | 0004764 | molecular_function | shikimate 3-dehydrogenase (NADP+) activity |
B | 0005515 | molecular_function | protein binding |
B | 0005829 | cellular_component | cytosol |
B | 0008652 | biological_process | amino acid biosynthetic process |
B | 0009073 | biological_process | aromatic amino acid family biosynthetic process |
B | 0009423 | biological_process | chorismate biosynthetic process |
B | 0016491 | molecular_function | oxidoreductase activity |
B | 0019632 | biological_process | shikimate metabolic process |
B | 0050661 | molecular_function | NADP binding |
C | 0000166 | molecular_function | nucleotide binding |
C | 0004764 | molecular_function | shikimate 3-dehydrogenase (NADP+) activity |
C | 0005515 | molecular_function | protein binding |
C | 0005829 | cellular_component | cytosol |
C | 0008652 | biological_process | amino acid biosynthetic process |
C | 0009073 | biological_process | aromatic amino acid family biosynthetic process |
C | 0009423 | biological_process | chorismate biosynthetic process |
C | 0016491 | molecular_function | oxidoreductase activity |
C | 0019632 | biological_process | shikimate metabolic process |
C | 0050661 | molecular_function | NADP binding |
D | 0000166 | molecular_function | nucleotide binding |
D | 0004764 | molecular_function | shikimate 3-dehydrogenase (NADP+) activity |
D | 0005515 | molecular_function | protein binding |
D | 0005829 | cellular_component | cytosol |
D | 0008652 | biological_process | amino acid biosynthetic process |
D | 0009073 | biological_process | aromatic amino acid family biosynthetic process |
D | 0009423 | biological_process | chorismate biosynthetic process |
D | 0016491 | molecular_function | oxidoreductase activity |
D | 0019632 | biological_process | shikimate metabolic process |
D | 0050661 | molecular_function | NADP binding |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 9 |
Details | BINDING SITE FOR RESIDUE SO4 A 1402 |
Chain | Residue |
A | ARG117 |
A | TYR209 |
A | HOH1425 |
A | HOH1425 |
A | HOH1528 |
A | HOH1565 |
A | HOH1715 |
A | HOH1733 |
A | HOH1750 |
site_id | AC2 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE SO4 A 1403 |
Chain | Residue |
A | HIS205 |
A | PRO206 |
A | GLY207 |
A | HOH1437 |
A | HOH1577 |
A | HOH1769 |
A | HOH1789 |
site_id | AC3 |
Number of Residues | 10 |
Details | BINDING SITE FOR RESIDUE SO4 A 1404 |
Chain | Residue |
A | SER14 |
A | SER16 |
A | THR61 |
A | TYR215 |
A | LEU241 |
A | DTV1405 |
A | HOH1681 |
A | HOH1724 |
A | HOH1725 |
A | HOH1726 |
site_id | AC4 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE SO4 B 1412 |
Chain | Residue |
B | ARG117 |
B | TYR209 |
B | HOH1435 |
B | HOH1435 |
B | HOH1580 |
B | HOH1715 |
B | HOH1752 |
site_id | AC5 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE SO4 B 1413 |
Chain | Residue |
B | HIS205 |
B | PRO206 |
B | GLY207 |
B | HOH1464 |
B | HOH1487 |
B | HOH1659 |
B | HOH1714 |
B | HOH1824 |
site_id | AC6 |
Number of Residues | 10 |
Details | BINDING SITE FOR RESIDUE SO4 B 1414 |
Chain | Residue |
B | SER14 |
B | SER16 |
B | THR61 |
B | LEU241 |
B | HOH1482 |
B | HOH1566 |
B | HOH1769 |
B | HOH1770 |
B | HOH1774 |
B | HOH1775 |
site_id | AC7 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE SO4 C 1422 |
Chain | Residue |
B | GLN21 |
C | ARG117 |
C | HOH1551 |
C | HOH1578 |
C | HOH1656 |
C | HOH1675 |
C | HOH1678 |
site_id | AC8 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE SO4 C 1423 |
Chain | Residue |
C | THR61 |
C | LYS65 |
C | HOH1613 |
site_id | AC9 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE SO4 A 1424 |
Chain | Residue |
A | GLU111 |
A | SER114 |
A | HOH1547 |
A | HOH1648 |
A | HOH1677 |
A | HOH1769 |
C | GLN26 |
site_id | BC1 |
Number of Residues | 9 |
Details | BINDING SITE FOR RESIDUE SO4 C 1425 |
Chain | Residue |
C | THR61 |
C | VAL62 |
C | PRO63 |
C | PHE64 |
C | LYS65 |
C | GLU66 |
C | HOH1542 |
C | HOH1636 |
C | HOH1684 |
site_id | BC2 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE SO4 C 1426 |
Chain | Residue |
C | PHE51 |
C | ARG90 |
C | GLY94 |
C | HOH1526 |
C | HOH1655 |
D | ARG90 |
D | GLY94 |
D | HOH1585 |
site_id | BC3 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE SO4 D 1432 |
Chain | Residue |
D | ARG117 |
D | HOH1502 |
D | HOH1677 |
site_id | BC4 |
Number of Residues | 9 |
Details | BINDING SITE FOR RESIDUE SO4 D 1433 |
Chain | Residue |
D | THR61 |
D | VAL62 |
D | LYS65 |
D | NAP1431 |
D | HOH1581 |
D | HOH1597 |
D | HOH1613 |
D | HOH1673 |
D | HOH1678 |
site_id | BC5 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE SO4 B 1434 |
Chain | Residue |
B | HOH1756 |
D | GLN26 |
D | HOH1686 |
B | GLU111 |
B | HOH1605 |
site_id | BC6 |
Number of Residues | 34 |
Details | BINDING SITE FOR RESIDUE NAP A 1401 |
Chain | Residue |
A | VAL62 |
A | LYS65 |
A | ASP102 |
A | GLY126 |
A | ALA127 |
A | GLY128 |
A | GLY129 |
A | ALA130 |
A | ASN149 |
A | ARG150 |
A | THR151 |
A | ARG154 |
A | ALA187 |
A | THR188 |
A | SER189 |
A | SER190 |
A | MET213 |
A | GLY237 |
A | MET240 |
A | LEU241 |
A | DTV1405 |
A | HOH1432 |
A | HOH1440 |
A | HOH1448 |
A | HOH1453 |
A | HOH1474 |
A | HOH1494 |
A | HOH1495 |
A | HOH1578 |
A | HOH1599 |
A | HOH1622 |
A | HOH1623 |
A | HOH1665 |
A | HOH1722 |
site_id | BC7 |
Number of Residues | 11 |
Details | BINDING SITE FOR RESIDUE DTV A 1405 |
Chain | Residue |
A | ASN59 |
A | VAL60 |
A | THR61 |
A | VAL62 |
A | LYS65 |
A | ASN86 |
A | ASP102 |
A | LEU241 |
A | GLN244 |
A | NAP1401 |
A | SO41404 |
site_id | BC8 |
Number of Residues | 35 |
Details | BINDING SITE FOR RESIDUE NAP B 1411 |
Chain | Residue |
B | VAL62 |
B | PRO63 |
B | LYS65 |
B | ASP102 |
B | GLY126 |
B | ALA127 |
B | GLY128 |
B | GLY129 |
B | ALA130 |
B | ASN149 |
B | ARG150 |
B | THR151 |
B | ARG154 |
B | ALA187 |
B | THR188 |
B | SER189 |
B | SER190 |
B | MET213 |
B | GLY237 |
B | MET240 |
B | LEU241 |
B | HOH1444 |
B | HOH1465 |
B | HOH1468 |
B | HOH1481 |
B | HOH1490 |
B | HOH1500 |
B | HOH1513 |
B | HOH1531 |
B | HOH1548 |
B | HOH1603 |
B | HOH1616 |
B | HOH1720 |
B | HOH1741 |
B | HOH1773 |
site_id | BC9 |
Number of Residues | 23 |
Details | BINDING SITE FOR RESIDUE NAP C 1421 |
Chain | Residue |
C | GLY126 |
C | ALA127 |
C | GLY128 |
C | GLY129 |
C | ALA130 |
C | ASN149 |
C | ARG150 |
C | THR151 |
C | ARG154 |
C | ALA187 |
C | THR188 |
C | SER189 |
C | MET213 |
C | GLY237 |
C | MET240 |
C | LEU241 |
C | GLN244 |
C | HOH1515 |
C | HOH1540 |
C | HOH1555 |
C | HOH1602 |
C | HOH1616 |
C | HOH1634 |
site_id | CC1 |
Number of Residues | 33 |
Details | BINDING SITE FOR RESIDUE NAP D 1431 |
Chain | Residue |
D | VAL62 |
D | ASP102 |
D | GLY126 |
D | ALA127 |
D | GLY128 |
D | GLY129 |
D | ALA130 |
D | ASN149 |
D | ARG150 |
D | THR151 |
D | ARG154 |
D | ALA187 |
D | THR188 |
D | SER189 |
D | SER190 |
D | MET213 |
D | TYR215 |
D | GLY237 |
D | MET240 |
D | LEU241 |
D | SO41433 |
D | HOH1455 |
D | HOH1468 |
D | HOH1503 |
D | HOH1538 |
D | HOH1545 |
D | HOH1568 |
D | HOH1581 |
D | HOH1610 |
D | HOH1613 |
D | HOH1642 |
D | HOH1646 |
D | HOH1703 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 4 |
Details | ACT_SITE: Proton acceptor => ECO:0000255|HAMAP-Rule:MF_00222 |
Chain | Residue | Details |
A | LYS65 | |
B | LYS65 | |
C | LYS65 | |
D | LYS65 |
site_id | SWS_FT_FI2 |
Number of Residues | 28 |
Details | BINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_00222 |
Chain | Residue | Details |
A | SER14 | |
B | GLU77 | |
B | ASN86 | |
B | ASP102 | |
B | TYR215 | |
B | GLN244 | |
C | SER14 | |
C | THR61 | |
C | GLU77 | |
C | ASN86 | |
C | ASP102 | |
A | THR61 | |
C | TYR215 | |
C | GLN244 | |
D | SER14 | |
D | THR61 | |
D | GLU77 | |
D | ASN86 | |
D | ASP102 | |
D | TYR215 | |
D | GLN244 | |
A | GLU77 | |
A | ASN86 | |
A | ASP102 | |
A | TYR215 | |
A | GLN244 | |
B | SER14 | |
B | THR61 |
site_id | SWS_FT_FI3 |
Number of Residues | 16 |
Details | BINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_00222, ECO:0000269|PubMed:12637497 |
Chain | Residue | Details |
A | GLY126 | |
C | ASN149 | |
C | MET213 | |
C | GLY237 | |
D | GLY126 | |
D | ASN149 | |
D | MET213 | |
D | GLY237 | |
A | ASN149 | |
A | MET213 | |
A | GLY237 | |
B | GLY126 | |
B | ASN149 | |
B | MET213 | |
B | GLY237 | |
C | GLY126 |
Catalytic Information from CSA
site_id | CSA1 |
Number of Residues | 1 |
Details | Annotated By Reference To The Literature 1nvt |
Chain | Residue | Details |
A | ASP93 |
site_id | CSA2 |
Number of Residues | 1 |
Details | Annotated By Reference To The Literature 1nvt |
Chain | Residue | Details |
B | ASP93 |
site_id | CSA3 |
Number of Residues | 1 |
Details | Annotated By Reference To The Literature 1nvt |
Chain | Residue | Details |
C | ASP93 |
site_id | CSA4 |
Number of Residues | 1 |
Details | Annotated By Reference To The Literature 1nvt |
Chain | Residue | Details |
D | ASP93 |