1N61
Crystal Structure of the Cu,Mo-CO Dehydrogenase (CODH); Dithionite reduced state
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0008805 | molecular_function | carbon-monoxide oxygenase activity |
A | 0016491 | molecular_function | oxidoreductase activity |
A | 0046872 | molecular_function | metal ion binding |
A | 0051536 | molecular_function | iron-sulfur cluster binding |
A | 0051537 | molecular_function | 2 iron, 2 sulfur cluster binding |
B | 0005506 | molecular_function | iron ion binding |
B | 0005507 | molecular_function | copper ion binding |
B | 0008805 | molecular_function | carbon-monoxide oxygenase activity |
B | 0016491 | molecular_function | oxidoreductase activity |
B | 0030151 | molecular_function | molybdenum ion binding |
B | 0043885 | molecular_function | anaerobic carbon-monoxide dehydrogenase activity |
B | 0046872 | molecular_function | metal ion binding |
C | 0008805 | molecular_function | carbon-monoxide oxygenase activity |
C | 0016491 | molecular_function | oxidoreductase activity |
C | 0050660 | molecular_function | flavin adenine dinucleotide binding |
C | 0071949 | molecular_function | FAD binding |
D | 0008805 | molecular_function | carbon-monoxide oxygenase activity |
D | 0016491 | molecular_function | oxidoreductase activity |
D | 0046872 | molecular_function | metal ion binding |
D | 0051536 | molecular_function | iron-sulfur cluster binding |
D | 0051537 | molecular_function | 2 iron, 2 sulfur cluster binding |
E | 0005506 | molecular_function | iron ion binding |
E | 0005507 | molecular_function | copper ion binding |
E | 0008805 | molecular_function | carbon-monoxide oxygenase activity |
E | 0016491 | molecular_function | oxidoreductase activity |
E | 0030151 | molecular_function | molybdenum ion binding |
E | 0043885 | molecular_function | anaerobic carbon-monoxide dehydrogenase activity |
E | 0046872 | molecular_function | metal ion binding |
F | 0008805 | molecular_function | carbon-monoxide oxygenase activity |
F | 0016491 | molecular_function | oxidoreductase activity |
F | 0050660 | molecular_function | flavin adenine dinucleotide binding |
F | 0071949 | molecular_function | FAD binding |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE PO4 A 3001 |
Chain | Residue |
A | HIS5 |
A | HOH3982 |
A | HOH4027 |
A | HOH4087 |
site_id | AC2 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE FES A 3907 |
Chain | Residue |
A | ARG138 |
A | CYS139 |
A | GLN101 |
A | CYS102 |
A | GLY103 |
A | CYS105 |
A | CYS137 |
site_id | AC3 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE FES A 3908 |
Chain | Residue |
A | GLY41 |
A | CYS42 |
A | SER45 |
A | CYS47 |
A | GLY48 |
A | CYS50 |
A | CYS62 |
site_id | AC4 |
Number of Residues | 12 |
Details | BINDING SITE FOR RESIDUE CUN B 3921 |
Chain | Residue |
B | GLN240 |
B | GLY272 |
B | ALA385 |
B | TYR386 |
B | ARG387 |
B | CYS388 |
B | SER389 |
B | TYR568 |
B | GLY569 |
B | GLU763 |
B | MCN3920 |
B | HOH4307 |
site_id | AC5 |
Number of Residues | 31 |
Details | BINDING SITE FOR RESIDUE MCN B 3920 |
Chain | Residue |
A | GLN101 |
A | CYS139 |
B | GLY270 |
B | PHE271 |
B | ARG387 |
B | GLN528 |
B | GLY529 |
B | GLN530 |
B | HIS532 |
B | THR535 |
B | THR567 |
B | TYR568 |
B | GLY569 |
B | SER570 |
B | ARG571 |
B | SER572 |
B | THR573 |
B | CYS686 |
B | THR688 |
B | ILE690 |
B | ASN691 |
B | ILE694 |
B | ILE695 |
B | GLN698 |
B | LYS759 |
B | GLY760 |
B | VAL761 |
B | GLY762 |
B | GLU763 |
B | CUN3921 |
B | HOH4002 |
site_id | AC6 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE FES D 4907 |
Chain | Residue |
D | GLN101 |
D | CYS102 |
D | GLY103 |
D | CYS105 |
D | CYS137 |
D | ARG138 |
D | CYS139 |
site_id | AC7 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE FES D 4908 |
Chain | Residue |
D | GLY41 |
D | CYS42 |
D | SER45 |
D | HIS46 |
D | CYS47 |
D | GLY48 |
D | CYS50 |
D | CYS62 |
site_id | AC8 |
Number of Residues | 12 |
Details | BINDING SITE FOR RESIDUE CUN E 4921 |
Chain | Residue |
E | GLN240 |
E | GLY272 |
E | ALA385 |
E | TYR386 |
E | ARG387 |
E | CYS388 |
E | SER389 |
E | TYR568 |
E | GLY569 |
E | GLU763 |
E | MCN4920 |
E | HOH5292 |
site_id | AC9 |
Number of Residues | 31 |
Details | BINDING SITE FOR RESIDUE MCN E 4920 |
Chain | Residue |
E | TYR568 |
E | GLY569 |
E | SER570 |
E | ARG571 |
E | SER572 |
E | THR573 |
E | CYS686 |
E | THR688 |
E | ILE690 |
E | ASN691 |
E | ILE694 |
E | ILE695 |
E | GLN698 |
E | LYS759 |
E | GLY760 |
E | VAL761 |
E | GLY762 |
E | GLU763 |
E | CUN4921 |
E | HOH5038 |
D | GLN101 |
D | CYS139 |
E | GLY270 |
E | PHE271 |
E | ARG387 |
E | GLN528 |
E | GLY529 |
E | GLN530 |
E | HIS532 |
E | THR535 |
E | THR567 |
site_id | BC1 |
Number of Residues | 32 |
Details | BINDING SITE FOR RESIDUE FAD F 4931 |
Chain | Residue |
D | SER45 |
D | HIS46 |
F | ARG29 |
F | PRO30 |
F | ALA32 |
F | GLY33 |
F | GLY34 |
F | HIS35 |
F | SER36 |
F | LEU37 |
F | ILE101 |
F | ALA102 |
F | ILE106 |
F | GLY110 |
F | THR111 |
F | GLY114 |
F | ASN115 |
F | ASN118 |
F | ASN123 |
F | ASP124 |
F | ILE161 |
F | LEU167 |
F | LYS185 |
F | GLY191 |
F | ASP192 |
F | TYR193 |
F | HOH4940 |
F | HOH4944 |
F | HOH4985 |
F | HOH5006 |
F | HOH5059 |
F | HOH5153 |
site_id | BC2 |
Number of Residues | 33 |
Details | BINDING SITE FOR RESIDUE FAD C 3932 |
Chain | Residue |
A | SER45 |
A | HIS46 |
C | ARG29 |
C | PRO30 |
C | ALA32 |
C | GLY33 |
C | GLY34 |
C | HIS35 |
C | SER36 |
C | LEU37 |
C | ILE101 |
C | ALA102 |
C | GLY110 |
C | THR111 |
C | GLY114 |
C | ASN115 |
C | ALA117 |
C | ASN118 |
C | ASN123 |
C | ASP124 |
C | LEU166 |
C | LEU167 |
C | LYS185 |
C | GLY191 |
C | ASP192 |
C | TYR193 |
C | HOH3938 |
C | HOH3949 |
C | HOH4003 |
C | HOH4029 |
C | HOH4056 |
C | HOH4073 |
C | HOH4205 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 4 |
Details | BINDING: BINDING => ECO:0000269|PubMed:10430865, ECO:0000269|PubMed:12475995 |
Chain | Residue | Details |
C | ALA32 | |
D | CYS47 | |
D | CYS50 | |
D | CYS62 | |
D | CYS102 | |
D | CYS105 | |
D | CYS137 | |
D | CYS139 | |
C | THR111 | |
F | ALA32 | |
F | THR111 | |
A | CYS102 | |
A | CYS105 | |
A | CYS137 | |
A | CYS139 | |
D | CYS42 |
site_id | SWS_FT_FI2 |
Number of Residues | 2 |
Details | BINDING: BINDING => ECO:0000269|PubMed:10430865, ECO:0000269|PubMed:12475995 |
Chain | Residue | Details |
B | GLU763 | |
E | GLU763 |
Catalytic Information from CSA
site_id | CSA1 |
Number of Residues | 1 |
Details | Annotated By Reference To The Literature 1fiq |
Chain | Residue | Details |
B | GLU763 |
site_id | CSA2 |
Number of Residues | 1 |
Details | Annotated By Reference To The Literature 1fiq |
Chain | Residue | Details |
E | GLU763 |
site_id | CSA3 |
Number of Residues | 2 |
Details | Annotated By Reference To The Literature 1fiq |
Chain | Residue | Details |
B | GLN240 | |
B | ARG387 |
site_id | CSA4 |
Number of Residues | 2 |
Details | Annotated By Reference To The Literature 1fiq |
Chain | Residue | Details |
E | GLN240 | |
E | ARG387 |
site_id | MCSA1 |
Number of Residues | 4 |
Details | M-CSA 107 |
Chain | Residue | Details |
B | GLN240 | electrostatic stabiliser |
B | ARG387 | electrostatic stabiliser |
B | CYS388 | metal ligand |
B | GLU763 | proton acceptor, proton donor, proton relay |
site_id | MCSA2 |
Number of Residues | 4 |
Details | M-CSA 107 |
Chain | Residue | Details |
E | GLN240 | electrostatic stabiliser |
E | ARG387 | electrostatic stabiliser |
E | CYS388 | metal ligand |
E | GLU763 | proton acceptor, proton donor, proton relay |