1N2M
The S53A Proenzyme Structure of Methanococcus jannaschii.
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0006520 | biological_process | amino acid metabolic process |
A | 0006527 | biological_process | arginine catabolic process |
A | 0008792 | molecular_function | arginine decarboxylase activity |
A | 0016831 | molecular_function | carboxy-lyase activity |
B | 0006520 | biological_process | amino acid metabolic process |
B | 0006527 | biological_process | arginine catabolic process |
B | 0008792 | molecular_function | arginine decarboxylase activity |
B | 0016831 | molecular_function | carboxy-lyase activity |
C | 0006520 | biological_process | amino acid metabolic process |
C | 0006527 | biological_process | arginine catabolic process |
C | 0008792 | molecular_function | arginine decarboxylase activity |
C | 0016831 | molecular_function | carboxy-lyase activity |
D | 0006520 | biological_process | amino acid metabolic process |
D | 0006527 | biological_process | arginine catabolic process |
D | 0008792 | molecular_function | arginine decarboxylase activity |
D | 0016831 | molecular_function | carboxy-lyase activity |
E | 0006520 | biological_process | amino acid metabolic process |
E | 0006527 | biological_process | arginine catabolic process |
E | 0008792 | molecular_function | arginine decarboxylase activity |
E | 0016831 | molecular_function | carboxy-lyase activity |
F | 0006520 | biological_process | amino acid metabolic process |
F | 0006527 | biological_process | arginine catabolic process |
F | 0008792 | molecular_function | arginine decarboxylase activity |
F | 0016831 | molecular_function | carboxy-lyase activity |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE MRD B 7001 |
Chain | Residue |
A | GLU109 |
B | PHE34 |
B | TYR77 |
B | TYR79 |
B | ILE81 |
site_id | AC2 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE MRD F 7002 |
Chain | Residue |
F | TYR79 |
F | ILE81 |
D | GLU109 |
D | HOH6487 |
F | LEU31 |
F | TYR77 |
site_id | AC3 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE MRD D 7003 |
Chain | Residue |
D | LEU31 |
D | PHE34 |
D | TYR79 |
D | ILE81 |
E | GLU109 |
site_id | AC4 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE MRD E 7004 |
Chain | Residue |
E | LEU31 |
E | TYR77 |
E | TYR79 |
E | ILE81 |
F | GLU109 |
site_id | AC5 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE MRD C 7005 |
Chain | Residue |
B | GLU109 |
C | LEU31 |
C | PHE34 |
C | TYR77 |
C | TYR79 |
C | ILE81 |
site_id | AC6 |
Number of Residues | 1 |
Details | BINDING SITE FOR RESIDUE MRD A 7006 |
Chain | Residue |
A | TYR79 |
site_id | AC7 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE MRD D 7007 |
Chain | Residue |
D | PHE131 |
D | GLU132 |
D | GLY135 |
D | TRP136 |
F | GLY135 |
F | TRP136 |
F | GLU137 |
site_id | AC8 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE MRD B 7008 |
Chain | Residue |
B | GLU132 |
B | GLY135 |
B | TRP136 |
C | GLY135 |
C | TRP136 |
C | GLU137 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 6 |
Details | SITE: Cleavage (non-hydrolytic) |
Chain | Residue | Details |
A | SER52 | |
B | SER52 | |
C | SER52 | |
D | SER52 | |
E | SER52 | |
F | SER52 |
site_id | SWS_FT_FI2 |
Number of Residues | 6 |
Details | MOD_RES: Pyruvic acid (Ser) => ECO:0000269|PubMed:11980912 |
Chain | Residue | Details |
A | ALA53 | |
B | ALA53 | |
C | ALA53 | |
D | ALA53 | |
E | ALA53 | |
F | ALA53 |
Catalytic Information from CSA
site_id | MCSA1 |
Number of Residues | 4 |
Details | M-CSA 707 |
Chain | Residue | Details |
A | ASN47 | |
A | SER52 | |
A | ALA53 | |
A | GLU109 | proton shuttle (general acid/base) |
site_id | MCSA2 |
Number of Residues | 4 |
Details | M-CSA 707 |
Chain | Residue | Details |
B | ASN47 | |
B | SER52 | |
B | ALA53 | |
B | GLU109 | proton shuttle (general acid/base) |
site_id | MCSA3 |
Number of Residues | 4 |
Details | M-CSA 707 |
Chain | Residue | Details |
C | ASN47 | |
C | SER52 | |
C | ALA53 | |
C | GLU109 | proton shuttle (general acid/base) |
site_id | MCSA4 |
Number of Residues | 4 |
Details | M-CSA 707 |
Chain | Residue | Details |
D | ASN47 | |
D | SER52 | |
D | ALA53 | |
D | GLU109 | proton shuttle (general acid/base) |
site_id | MCSA5 |
Number of Residues | 4 |
Details | M-CSA 707 |
Chain | Residue | Details |
E | ASN47 | |
E | SER52 | |
E | ALA53 | |
E | GLU109 | proton shuttle (general acid/base) |
site_id | MCSA6 |
Number of Residues | 4 |
Details | M-CSA 707 |
Chain | Residue | Details |
F | ASN47 | |
F | SER52 | |
F | ALA53 | |
F | GLU109 | proton shuttle (general acid/base) |