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1N07

Crystal Structure of Schizosaccharomyces pombe Riboflavin Kinase Reveals a Novel ATP and Riboflavin Binding Fold

Functional Information from GO Data
ChainGOidnamespacecontents
A0005524molecular_functionATP binding
A0005634cellular_componentnucleus
A0005739cellular_componentmitochondrion
A0005743cellular_componentmitochondrial inner membrane
A0005829cellular_componentcytosol
A0006771biological_processriboflavin metabolic process
A0008270molecular_functionzinc ion binding
A0008531molecular_functionriboflavin kinase activity
A0009231biological_processriboflavin biosynthetic process
A0009398biological_processFMN biosynthetic process
A0016301molecular_functionkinase activity
A0016310biological_processphosphorylation
A0046872molecular_functionmetal ion binding
B0005524molecular_functionATP binding
B0005634cellular_componentnucleus
B0005739cellular_componentmitochondrion
B0005743cellular_componentmitochondrial inner membrane
B0005829cellular_componentcytosol
B0006771biological_processriboflavin metabolic process
B0008270molecular_functionzinc ion binding
B0008531molecular_functionriboflavin kinase activity
B0009231biological_processriboflavin biosynthetic process
B0009398biological_processFMN biosynthetic process
B0016301molecular_functionkinase activity
B0016310biological_processphosphorylation
B0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues17
DetailsBINDING SITE FOR RESIDUE ADP A 164
ChainResidue
AVAL30
AVAL97
AHIS98
ALEU99
AASP106
APHE107
ATYR108
AHOH170
BTYR88
AHIS32
AGLY33
AARG36
AGLY37
ASER38
ALYS39
APRO44
ATHR45

site_idAC2
Number of Residues19
DetailsBINDING SITE FOR RESIDUE ADP B 201
ChainResidue
ATYR88
BGLY33
BGLY35
BARG36
BGLY37
BSER38
BLYS39
BPRO44
BTHR45
BVAL97
BHIS98
BLEU99
BARG102
BASP106
BPHE107
BTYR108
BHOH208
BHOH220
BHOH241

site_idAC3
Number of Residues8
DetailsBINDING SITE FOR RESIDUE FMN A 165
ChainResidue
AVAL64
ASER81
AARG121
AGLU123
ALEU124
ATYR126
ALEU132
AASP139

site_idAC4
Number of Residues11
DetailsBINDING SITE FOR RESIDUE FMN B 202
ChainResidue
BARG36
BTHR45
BASN47
BVAL64
BSER81
BGLU96
BARG121
BGLU123
BLEU124
BASN125
BLEU132

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsACT_SITE: Nucleophile => ECO:0000305
ChainResidueDetails
AGLU96
BGLU96

site_idSWS_FT_FI2
Number of Residues2
DetailsBINDING:
ChainResidueDetails
ATHR45
BTHR45

223790

PDB entries from 2024-08-14

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