1MKA
E. COLI BETA-HYDROXYDECANOYL THIOL ESTER DEHYDRASE MODIFIED BY ITS CLASSIC MECHANISM-BASED INACTIVATOR, 3-DECYNOYL-N-ACETYL CYSTEAMINE
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0003824 | molecular_function | catalytic activity |
A | 0004317 | molecular_function | (3R)-3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity |
A | 0005737 | cellular_component | cytoplasm |
A | 0005829 | cellular_component | cytosol |
A | 0006633 | biological_process | fatty acid biosynthetic process |
A | 0006636 | biological_process | unsaturated fatty acid biosynthetic process |
A | 0008659 | molecular_function | (3R)-3-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity |
A | 0008693 | molecular_function | (3R)-3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity |
A | 0016829 | molecular_function | lyase activity |
A | 0016853 | molecular_function | isomerase activity |
A | 0019171 | molecular_function | (3R)-hydroxyacyl-[acyl-carrier-protein] dehydratase activity |
A | 0034017 | molecular_function | trans-2-decenoyl-acyl-carrier-protein isomerase activity |
A | 0042803 | molecular_function | protein homodimerization activity |
A | 0047450 | molecular_function | (3R)-3-hydroxybutanoyl-[acyl-carrier-protein] hydratase activity |
A | 0047451 | molecular_function | (3R)-3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity |
B | 0003824 | molecular_function | catalytic activity |
B | 0004317 | molecular_function | (3R)-3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity |
B | 0005737 | cellular_component | cytoplasm |
B | 0005829 | cellular_component | cytosol |
B | 0006633 | biological_process | fatty acid biosynthetic process |
B | 0006636 | biological_process | unsaturated fatty acid biosynthetic process |
B | 0008659 | molecular_function | (3R)-3-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity |
B | 0008693 | molecular_function | (3R)-3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity |
B | 0016829 | molecular_function | lyase activity |
B | 0016853 | molecular_function | isomerase activity |
B | 0019171 | molecular_function | (3R)-hydroxyacyl-[acyl-carrier-protein] dehydratase activity |
B | 0034017 | molecular_function | trans-2-decenoyl-acyl-carrier-protein isomerase activity |
B | 0042803 | molecular_function | protein homodimerization activity |
B | 0047450 | molecular_function | (3R)-3-hydroxybutanoyl-[acyl-carrier-protein] hydratase activity |
B | 0047451 | molecular_function | (3R)-3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 2 |
Details | TWO POLAR RESIDUES ARE FOUND IN THE CATALYTIC REGION OF THE ACTIVE SITE. |
Chain | Residue |
A | HIS70 |
B | ASP84 |
site_id | AC2 |
Number of Residues | 2 |
Details | TWO POLAR RESIDUES ARE FOUND IN THE CATALYTIC REGION OF THE ACTIVE SITE. |
Chain | Residue |
B | HIS70 |
A | ASP84 |
site_id | AC3 |
Number of Residues | 13 |
Details | BINDING SITE FOR RESIDUE DAC A 172 |
Chain | Residue |
A | GLY115 |
B | GLN27 |
B | TRP87 |
B | GLY91 |
B | ARG104 |
B | ALA105 |
B | LEU106 |
B | PHE171 |
A | HIS70 |
A | PHE71 |
A | MET77 |
A | GLY79 |
A | PHE113 |
site_id | AC4 |
Number of Residues | 13 |
Details | BINDING SITE FOR RESIDUE DAC B 172 |
Chain | Residue |
A | GLN27 |
A | GLY91 |
A | ARG104 |
A | ALA105 |
A | LEU106 |
A | PHE171 |
B | HIS70 |
B | PHE71 |
B | MET77 |
B | GLY79 |
B | PHE113 |
B | GLY115 |
B | GLN116 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 2 |
Details | ACT_SITE: ACT_SITE => ECO:0000305|PubMed:21276098 |
Chain | Residue | Details |
A | PHE71 | |
B | PHE71 |
Catalytic Information from CSA
site_id | CSA1 |
Number of Residues | 5 |
Details | a catalytic site defined by CSA, PubMed 8805534 |
Chain | Residue | Details |
A | HIS70 | |
A | ASP84 | |
A | VAL76 | |
A | GLY79 | |
A | CYS80 |
site_id | MCSA1 |
Number of Residues | 5 |
Details | M-CSA 10 |
Chain | Residue | Details |
A | PHE71 | hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor |
A | MET77 | activator, electrostatic stabiliser, hydrogen bond acceptor |
A | CYS80 | electrostatic stabiliser, hydrogen bond donor |
A | LEU81 | electrostatic stabiliser, hydrogen bond donor |
A | ALA85 | hydrogen bond donor, proton acceptor, proton donor |
site_id | MCSA2 |
Number of Residues | 5 |
Details | M-CSA 10 |
Chain | Residue | Details |
B | PHE71 | hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor |
B | MET77 | activator, electrostatic stabiliser, hydrogen bond acceptor |
B | CYS80 | electrostatic stabiliser, hydrogen bond donor |
B | LEU81 | electrostatic stabiliser, hydrogen bond donor |
B | ALA85 | hydrogen bond donor, proton acceptor, proton donor |