1LNX
Crystal structure of the P.aerophilum SmAP1 heptamer in a new crystal form (C2221)
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0000398 | biological_process | mRNA splicing, via spliceosome |
| A | 0003723 | molecular_function | RNA binding |
| A | 0034715 | cellular_component | pICln-Sm protein complex |
| A | 0120114 | cellular_component | Sm-like protein family complex |
| A | 1990904 | cellular_component | ribonucleoprotein complex |
| B | 0000398 | biological_process | mRNA splicing, via spliceosome |
| B | 0003723 | molecular_function | RNA binding |
| B | 0034715 | cellular_component | pICln-Sm protein complex |
| B | 0120114 | cellular_component | Sm-like protein family complex |
| B | 1990904 | cellular_component | ribonucleoprotein complex |
| C | 0000398 | biological_process | mRNA splicing, via spliceosome |
| C | 0003723 | molecular_function | RNA binding |
| C | 0034715 | cellular_component | pICln-Sm protein complex |
| C | 0120114 | cellular_component | Sm-like protein family complex |
| C | 1990904 | cellular_component | ribonucleoprotein complex |
| D | 0000398 | biological_process | mRNA splicing, via spliceosome |
| D | 0003723 | molecular_function | RNA binding |
| D | 0034715 | cellular_component | pICln-Sm protein complex |
| D | 0120114 | cellular_component | Sm-like protein family complex |
| D | 1990904 | cellular_component | ribonucleoprotein complex |
| E | 0000398 | biological_process | mRNA splicing, via spliceosome |
| E | 0003723 | molecular_function | RNA binding |
| E | 0034715 | cellular_component | pICln-Sm protein complex |
| E | 0120114 | cellular_component | Sm-like protein family complex |
| E | 1990904 | cellular_component | ribonucleoprotein complex |
| F | 0000398 | biological_process | mRNA splicing, via spliceosome |
| F | 0003723 | molecular_function | RNA binding |
| F | 0034715 | cellular_component | pICln-Sm protein complex |
| F | 0120114 | cellular_component | Sm-like protein family complex |
| F | 1990904 | cellular_component | ribonucleoprotein complex |
| G | 0000398 | biological_process | mRNA splicing, via spliceosome |
| G | 0003723 | molecular_function | RNA binding |
| G | 0034715 | cellular_component | pICln-Sm protein complex |
| G | 0120114 | cellular_component | Sm-like protein family complex |
| G | 1990904 | cellular_component | ribonucleoprotein complex |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 8 |
| Details | BINDING SITE FOR RESIDUE URI F 8001 |
| Chain | Residue |
| B | GLN43 |
| B | URI8004 |
| F | GLY13 |
| F | PHE41 |
| F | GLN43 |
| F | VAL45 |
| G | ASN46 |
| G | HOH8215 |
| site_id | AC2 |
| Number of Residues | 12 |
| Details | BINDING SITE FOR RESIDUE URI G 8002 |
| Chain | Residue |
| A | GLN43 |
| A | ASN46 |
| A | URI8003 |
| A | HOH8241 |
| G | LEU12 |
| G | GLY13 |
| G | LEU16 |
| G | PHE41 |
| G | ASP42 |
| G | GLN43 |
| G | HOH8234 |
| A | ASP42 |
| site_id | AC3 |
| Number of Residues | 8 |
| Details | BINDING SITE FOR RESIDUE URI A 8003 |
| Chain | Residue |
| A | GLY13 |
| A | LEU16 |
| A | VAL45 |
| A | HOH8217 |
| A | HOH8241 |
| B | HOH8240 |
| G | GLN43 |
| G | URI8002 |
| site_id | AC4 |
| Number of Residues | 9 |
| Details | BINDING SITE FOR RESIDUE URI B 8004 |
| Chain | Residue |
| B | GLY13 |
| B | LEU16 |
| B | PHE41 |
| B | ASP42 |
| B | GLN43 |
| B | HOH8206 |
| F | GLN43 |
| F | URI8001 |
| F | HOH8213 |
| site_id | AC5 |
| Number of Residues | 10 |
| Details | BINDING SITE FOR RESIDUE URI D 8005 |
| Chain | Residue |
| C | GLY13 |
| C | LEU16 |
| C | ASP42 |
| C | GLN43 |
| D | ASN46 |
| D | VAL67 |
| D | HOH8230 |
| D | HOH8265 |
| E | GLN43 |
| E | URI8007 |
| site_id | AC6 |
| Number of Residues | 10 |
| Details | BINDING SITE FOR RESIDUE URI D 8006 |
| Chain | Residue |
| D | GLY13 |
| D | LEU16 |
| D | GLN43 |
| D | GLN43 |
| D | VAL45 |
| D | HOH8238 |
| D | HOH8259 |
| D | HOH8261 |
| E | ASN46 |
| E | VAL67 |
| site_id | AC7 |
| Number of Residues | 11 |
| Details | BINDING SITE FOR RESIDUE URI E 8007 |
| Chain | Residue |
| C | GLN43 |
| C | HOH8248 |
| D | URI8005 |
| D | HOH8265 |
| E | GLY13 |
| E | LEU16 |
| E | GLN17 |
| E | PHE41 |
| E | VAL45 |
| E | HOH8221 |
| E | HOH8244 |
| site_id | AC8 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE ACY D 8101 |
| Chain | Residue |
| D | ARG35 |
| D | GLY58 |
| D | VAL60 |
| site_id | AC9 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE ACY C 8102 |
| Chain | Residue |
| A | ARG29 |
| B | ARG29 |
| C | ARG29 |
| D | ARG29 |
| E | ARG29 |
| F | ARG29 |
| site_id | BC1 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE GOL G 8201 |
| Chain | Residue |
| A | GLU54 |
| A | ILE56 |
| A | TYR61 |
| A | ARG63 |
| G | LYS27 |
| G | GLU33 |
| site_id | BC2 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE GOL B 8202 |
| Chain | Residue |
| B | LYS27 |
| B | GLU33 |
| C | ARG63 |
| site_id | BC3 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE GOL F 8203 |
| Chain | Residue |
| F | VAL60 |
| F | TYR61 |
| F | HOH8212 |
| site_id | BC4 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE GOL E 8204 |
| Chain | Residue |
| E | LYS27 |
| E | GLU33 |
| F | TYR61 |
| F | ARG63 |
| site_id | BC5 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE GOL E 8205 |
| Chain | Residue |
| E | ARG35 |
| E | GLY58 |
| E | VAL60 |
| E | LYS62 |
| site_id | BC6 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE GOL F 8206 |
| Chain | Residue |
| G | ARG63 |
| F | LYS27 |
| F | GLU33 |
| site_id | BC7 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE GOL D 8207 |
| Chain | Residue |
| D | LYS27 |
| D | GLU33 |
| E | ARG63 |
| site_id | BC8 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE GOL C 8208 |
| Chain | Residue |
| C | LYS27 |
| C | GLU33 |
| D | GLU54 |
| D | TYR61 |
| D | ARG63 |
| site_id | BC9 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE GOL A 8209 |
| Chain | Residue |
| A | LYS27 |
| A | GLU33 |
| A | HOH8233 |
| B | TYR61 |
| B | ARG63 |
| site_id | CC1 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE GOL E 8210 |
| Chain | Residue |
| E | GLN23 |
| E | ARG35 |
| E | GLY36 |
| E | ILE37 |
| E | ASP51 |
