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1LC0

Structure of Biliverdin Reductase and the Enzyme-NADH Complex

Functional Information from GO Data
ChainGOidnamespacecontents
A0000166molecular_functionnucleotide binding
A0003824molecular_functioncatalytic activity
A0004074molecular_functionbiliverdin reductase [NAD(P)+] activity
A0005737cellular_componentcytoplasm
A0005829cellular_componentcytosol
A0008270molecular_functionzinc ion binding
A0016491molecular_functionoxidoreductase activity
A0042167biological_processheme catabolic process
A0046872molecular_functionmetal ion binding
A0106276molecular_functionbiliberdin reductase (NAD+) activity
A0106277molecular_functionbiliverdin reductase (NADP+) activity
Functional Information from PDB Data
site_idAC1
Number of Residues8
DetailsBINDING SITE FOR RESIDUE PO4 A 601
ChainResidue
AVAL16
ASER43
AARG44
AARG45
ALYS209
AHOH1031
AHOH1070
AHOH1171

site_idAC2
Number of Residues9
DetailsBINDING SITE FOR RESIDUE PO4 A 602
ChainResidue
APHE103
AALA104
ASER285
ALYS289
AHOH1121
AHOH1253
AHOH1293
AHOH1299
ASER102

site_idAC3
Number of Residues5
DetailsBINDING SITE FOR RESIDUE PO4 A 603
ChainResidue
AGLY17
AARG18
AHOH1061
AHOH1064
AHOH1322

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsBINDING: BINDING => ECO:0000269|PubMed:12079357, ECO:0007744|PDB:1LC3
ChainResidueDetails
AARG18
ASER76
ATYR97
ASER167

site_idSWS_FT_FI2
Number of Residues4
DetailsBINDING: BINDING => ECO:0000250|UniProtKB:P53004
ChainResidueDetails
AHIS279
ACYS280
ACYS291
AHIS292

site_idSWS_FT_FI3
Number of Residues1
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:22673903
ChainResidueDetails
ASER154

site_idSWS_FT_FI4
Number of Residues1
DetailsMOD_RES: Phosphothreonine => ECO:0000250|UniProtKB:P53004
ChainResidueDetails
ATHR173

site_idSWS_FT_FI5
Number of Residues1
DetailsMOD_RES: Phosphoserine => ECO:0000250|UniProtKB:P53004
ChainResidueDetails
ASER177

site_idSWS_FT_FI6
Number of Residues2
DetailsMOD_RES: N6-acetyllysine => ECO:0000250|UniProtKB:P53004
ChainResidueDetails
ALYS247
ALYS252

Catalytic Information from CSA
site_idCSA1
Number of Residues6
DetailsAnnotated By Reference To The Literature 1gcu
ChainResidueDetails
ATYR97
AGLU126
ASER170
AGLU123
AGLU96
AARG171

site_idMCSA1
Number of Residues6
DetailsM-CSA 566
ChainResidueDetails
AGLU96electrostatic stabiliser
ATYR97electrostatic stabiliser, proton acceptor, proton donor
AGLU123electrostatic stabiliser
AGLU126electrostatic stabiliser
ASER170electrostatic stabiliser
AARG171electrostatic stabiliser

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PDB entries from 2024-07-24

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