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1L2M

Minimized Average Structure of the N-terminal, DNA-binding domain of the replication initiation protein from a geminivirus (Tomato yellow leaf curl virus-Sardinia)

Functional Information from GO Data
ChainGOidnamespacecontents
A0005198molecular_functionstructural molecule activity
A0006260biological_processDNA replication
Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues108
DetailsDomain: {"description":"CRESS-DNA virus Rep endonuclease","evidences":[{"source":"PROSITE-ProRule","id":"PRU01364","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues3
DetailsMotif: {"description":"RCR-1","evidences":[{"source":"PROSITE-ProRule","id":"PRU01364","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"1630899","evidenceCode":"ECO:0000303"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues2
DetailsMotif: {"description":"RCR-2","evidences":[{"source":"PROSITE-ProRule","id":"PRU01364","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"1630899","evidenceCode":"ECO:0000303"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues3
DetailsMotif: {"description":"RCR-3","evidences":[{"source":"PROSITE-ProRule","id":"PRU01364","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"1630899","evidenceCode":"ECO:0000303"}]}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues1
DetailsActive site: {"description":"For DNA cleavage activity","evidences":[{"source":"PROSITE-ProRule","id":"PRU01364","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"8543063","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI6
Number of Residues4
DetailsBinding site: {"evidences":[{"source":"PROSITE-ProRule","id":"PRU01364","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

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PDB entries from 2025-10-08

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