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1KYZ

Crystal Structure Analysis of Caffeic acid/5-hydroxyferulic acid 3/5-O-methyltransferase Ferulic Acid Complex

Functional Information from GO Data
ChainGOidnamespacecontents
A0008168molecular_functionmethyltransferase activity
A0008171molecular_functionO-methyltransferase activity
A0008757molecular_functionS-adenosylmethionine-dependent methyltransferase activity
A0009699biological_processphenylpropanoid biosynthetic process
A0009809biological_processlignin biosynthetic process
A0016740molecular_functiontransferase activity
A0032259biological_processmethylation
A0046983molecular_functionprotein dimerization activity
A0047763molecular_functioncaffeate O-methyltransferase activity
C0008168molecular_functionmethyltransferase activity
C0008171molecular_functionO-methyltransferase activity
C0008757molecular_functionS-adenosylmethionine-dependent methyltransferase activity
C0009699biological_processphenylpropanoid biosynthetic process
C0009809biological_processlignin biosynthetic process
C0016740molecular_functiontransferase activity
C0032259biological_processmethylation
C0046983molecular_functionprotein dimerization activity
C0047763molecular_functioncaffeate O-methyltransferase activity
E0008168molecular_functionmethyltransferase activity
E0008171molecular_functionO-methyltransferase activity
E0008757molecular_functionS-adenosylmethionine-dependent methyltransferase activity
E0009699biological_processphenylpropanoid biosynthetic process
E0009809biological_processlignin biosynthetic process
E0016740molecular_functiontransferase activity
E0032259biological_processmethylation
E0046983molecular_functionprotein dimerization activity
E0047763molecular_functioncaffeate O-methyltransferase activity
Functional Information from PDB Data
site_idAC1
Number of Residues13
DetailsBINDING SITE FOR RESIDUE SAH E 1697
ChainResidue
EGLY208
ETRP266
ETRP271
EHOH1749
EHOH1771
EASP231
ELEU232
EVAL235
EASP251
EMET252
EPHE253
EMET264
ELYS265

site_idAC2
Number of Residues9
DetailsBINDING SITE FOR RESIDUE FER E 1698
ChainResidue
EMET130
EASN131
ELEU136
EALA162
EPHE176
EASP270
EILE316
EMET320
EHOH1814

site_idAC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE FER C 366
ChainResidue
CMET130
CASN131
CLEU136
CALA162
CHIS166
CMET320

site_idAC4
Number of Residues3
DetailsBINDING SITE FOR RESIDUE FER A 366
ChainResidue
AASN131
AALA162
APHE176

site_idAC5
Number of Residues13
DetailsBINDING SITE FOR RESIDUE SAH A 1698
ChainResidue
ASER184
AGLY208
AGLY210
AASP231
ALEU232
AVAL235
AASP251
AMET252
APHE253
AMET264
ALYS265
AILE267
ATRP271

site_idAC6
Number of Residues11
DetailsBINDING SITE FOR RESIDUE SAH C 1699
ChainResidue
CGLY208
CASP231
CLEU232
CVAL235
CASP251
CMET252
CPHE253
CMET264
CLYS265
CTRP266
CTRP271

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues3
DetailsActive site: {"description":"Proton acceptor","evidences":[{"source":"PROSITE-ProRule","id":"PRU01020","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"12084826","evidenceCode":"ECO:0000305"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues6
DetailsActive site: {"evidences":[{"source":"UniProtKB","id":"F1DBB3","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues21
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"12084826","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1KYZ","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues3
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"12084826","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1KYW","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

Catalytic Information from CSA
site_idCSA1
Number of Residues1
DetailsAnnotated By Reference To The Literature 1kyw
ChainResidueDetails
AHIS269

site_idCSA2
Number of Residues1
DetailsAnnotated By Reference To The Literature 1kyw
ChainResidueDetails
CHIS269

site_idCSA3
Number of Residues1
DetailsAnnotated By Reference To The Literature 1kyw
ChainResidueDetails
EHIS269

site_idMCSA1
Number of Residues4
DetailsM-CSA 621
ChainResidueDetails
AHIS269proton acceptor, proton donor
AASP270electrostatic stabiliser, steric role
AGLU297electrostatic stabiliser, steric role
AGLU329electrostatic stabiliser, hydrogen bond donor, steric role

site_idMCSA2
Number of Residues4
DetailsM-CSA 621
ChainResidueDetails

site_idMCSA3
Number of Residues4
DetailsM-CSA 621
ChainResidueDetails
CHIS269proton acceptor, proton donor
CASP270electrostatic stabiliser, steric role
CGLU297electrostatic stabiliser, steric role
CGLU329electrostatic stabiliser, hydrogen bond donor, steric role

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PDB entries from 2026-02-25

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