1KTG
Crystal Structure of a C. elegans Ap4A Hydrolase Binary Complex
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0004081 | molecular_function | bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity |
A | 0005524 | molecular_function | ATP binding |
A | 0005575 | cellular_component | cellular_component |
A | 0006167 | biological_process | AMP biosynthetic process |
A | 0006172 | biological_process | ADP biosynthetic process |
A | 0006754 | biological_process | ATP biosynthetic process |
A | 0006915 | biological_process | apoptotic process |
A | 0008796 | molecular_function | bis(5'-nucleosyl)-tetraphosphatase activity |
A | 0015967 | biological_process | diadenosine tetraphosphate catabolic process |
A | 0016787 | molecular_function | hydrolase activity |
A | 0019693 | biological_process | ribose phosphate metabolic process |
A | 0043135 | molecular_function | 5-phosphoribosyl 1-pyrophosphate pyrophosphatase activity |
B | 0004081 | molecular_function | bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity |
B | 0005524 | molecular_function | ATP binding |
B | 0005575 | cellular_component | cellular_component |
B | 0006167 | biological_process | AMP biosynthetic process |
B | 0006172 | biological_process | ADP biosynthetic process |
B | 0006754 | biological_process | ATP biosynthetic process |
B | 0006915 | biological_process | apoptotic process |
B | 0008796 | molecular_function | bis(5'-nucleosyl)-tetraphosphatase activity |
B | 0015967 | biological_process | diadenosine tetraphosphate catabolic process |
B | 0016787 | molecular_function | hydrolase activity |
B | 0019693 | biological_process | ribose phosphate metabolic process |
B | 0043135 | molecular_function | 5-phosphoribosyl 1-pyrophosphate pyrophosphatase activity |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 18 |
Details | BINDING SITE FOR RESIDUE PO4 A 402 |
Chain | Residue |
A | LYS36 |
A | MG505 |
A | OH506 |
A | HOH715 |
A | HOH722 |
A | HOH732 |
A | HOH749 |
A | HOH756 |
A | HOH769 |
A | HOH827 |
A | GLY37 |
A | HIS38 |
A | GLU52 |
A | GLU56 |
A | GLU103 |
A | MG502 |
A | MG503 |
A | MG504 |
site_id | AC2 |
Number of Residues | 18 |
Details | BINDING SITE FOR RESIDUE PO4 B 401 |
Chain | Residue |
B | LYS36 |
B | GLY37 |
B | HIS38 |
B | GLU52 |
B | GLU56 |
B | GLU103 |
B | MG601 |
B | MG602 |
B | MG603 |
B | MG604 |
B | OH605 |
B | HOH615 |
B | HOH631 |
B | HOH635 |
B | HOH654 |
B | HOH669 |
B | HOH672 |
B | HOH703 |
site_id | AC3 |
Number of Residues | 10 |
Details | BINDING SITE FOR RESIDUE OH A 506 |
Chain | Residue |
A | GLU52 |
A | GLU103 |
A | PO4402 |
A | MG503 |
A | MG504 |
A | MG505 |
A | HOH708 |
A | HOH742 |
A | HOH752 |
A | HOH756 |
site_id | AC4 |
Number of Residues | 10 |
Details | BINDING SITE FOR RESIDUE OH B 605 |
Chain | Residue |
B | GLU52 |
B | GLU103 |
B | PO4401 |
B | MG601 |
B | MG603 |
B | MG604 |
B | HOH611 |
B | HOH633 |
B | HOH650 |
B | HOH654 |
site_id | AC5 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE MG A 501 |
Chain | Residue |
A | GLU19 |
A | GLU111 |
A | HOH729 |
A | HOH737 |
B | HOH616 |
B | HOH638 |
B | HOH644 |
site_id | AC6 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE MG A 502 |
Chain | Residue |
A | LYS36 |
A | GLU56 |
A | PO4402 |
A | MG505 |
A | HOH722 |
A | HOH732 |
A | HOH734 |
site_id | AC7 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE MG A 503 |
Chain | Residue |
A | GLU52 |
A | PO4402 |
A | MG504 |
A | MG505 |
A | OH506 |
A | HOH715 |
A | HOH752 |
A | HOH756 |
site_id | AC8 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE MG A 504 |
Chain | Residue |
A | GLU103 |
A | PO4402 |
A | MG503 |
A | MG505 |
A | OH506 |
A | HOH742 |
A | HOH749 |
A | HOH756 |
site_id | AC9 |
Number of Residues | 9 |
Details | BINDING SITE FOR RESIDUE MG A 505 |
Chain | Residue |
A | GLU52 |
A | GLU56 |
A | GLU103 |
A | PO4402 |
A | MG502 |
A | MG503 |
A | MG504 |
A | OH506 |
A | HOH708 |
site_id | BC1 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE MG B 601 |
Chain | Residue |
B | OH605 |
B | HOH611 |
B | HOH654 |
B | HOH672 |
B | GLU103 |
B | PO4401 |
B | MG603 |
B | MG604 |
site_id | BC2 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE MG B 602 |
Chain | Residue |
B | LYS36 |
B | GLU56 |
B | PO4401 |
B | MG603 |
B | HOH607 |
B | HOH615 |
B | HOH669 |
site_id | BC3 |
Number of Residues | 9 |
Details | BINDING SITE FOR RESIDUE MG B 603 |
Chain | Residue |
B | GLU52 |
B | GLU56 |
B | GLU103 |
B | PO4401 |
B | MG601 |
B | MG602 |
B | MG604 |
B | OH605 |
B | HOH650 |
site_id | BC4 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE MG B 604 |
Chain | Residue |
B | GLU52 |
B | PO4401 |
B | MG601 |
B | MG603 |
B | OH605 |
B | HOH633 |
B | HOH635 |
B | HOH654 |
site_id | BC5 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE AMP A 701 |
Chain | Residue |
A | PRO29 |
A | HIS31 |
A | LYS36 |
A | TYR76 |
A | LYS83 |
A | TYR121 |
A | HOH782 |
A | HOH843 |
Functional Information from PROSITE/UniProt
site_id | PS00893 |
Number of Residues | 22 |
Details | NUDIX_BOX Nudix box signature. GhvdpgEdewqAAiRETkEEaN |
Chain | Residue | Details |
A | GLY37-ASN58 |