Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1KPC

PKCI-1-APO+ZINC

Functional Information from GO Data
ChainGOidnamespacecontents
A0000118cellular_componenthistone deacetylase complex
A0000166molecular_functionnucleotide binding
A0003824molecular_functioncatalytic activity
A0005080molecular_functionprotein kinase C binding
A0005515molecular_functionprotein binding
A0005634cellular_componentnucleus
A0005654cellular_componentnucleoplasm
A0005737cellular_componentcytoplasm
A0005829cellular_componentcytosol
A0005856cellular_componentcytoskeleton
A0005886cellular_componentplasma membrane
A0006355biological_processregulation of DNA-templated transcription
A0006508biological_processproteolysis
A0006790biological_processsulfur compound metabolic process
A0006915biological_processapoptotic process
A0007165biological_processsignal transduction
A0008233molecular_functionpeptidase activity
A0008234molecular_functioncysteine-type peptidase activity
A0009154biological_processpurine ribonucleotide catabolic process
A0016787molecular_functionhydrolase activity
A0016926biological_processprotein desumoylation
A0016929molecular_functiondeSUMOylase activity
A0043530molecular_functionadenosine 5'-monophosphoramidase activity
A0047627molecular_functionadenylylsulfatase activity
A0050850biological_processpositive regulation of calcium-mediated signaling
A0070062cellular_componentextracellular exosome
A0072332biological_processintrinsic apoptotic signaling pathway by p53 class mediator
B0000118cellular_componenthistone deacetylase complex
B0000166molecular_functionnucleotide binding
B0003824molecular_functioncatalytic activity
B0005080molecular_functionprotein kinase C binding
B0005515molecular_functionprotein binding
B0005634cellular_componentnucleus
B0005654cellular_componentnucleoplasm
B0005737cellular_componentcytoplasm
B0005829cellular_componentcytosol
B0005856cellular_componentcytoskeleton
B0005886cellular_componentplasma membrane
B0006355biological_processregulation of DNA-templated transcription
B0006508biological_processproteolysis
B0006790biological_processsulfur compound metabolic process
B0006915biological_processapoptotic process
B0007165biological_processsignal transduction
B0008233molecular_functionpeptidase activity
B0008234molecular_functioncysteine-type peptidase activity
B0009154biological_processpurine ribonucleotide catabolic process
B0016787molecular_functionhydrolase activity
B0016926biological_processprotein desumoylation
B0016929molecular_functiondeSUMOylase activity
B0043530molecular_functionadenosine 5'-monophosphoramidase activity
B0047627molecular_functionadenylylsulfatase activity
B0050850biological_processpositive regulation of calcium-mediated signaling
B0070062cellular_componentextracellular exosome
B0072332biological_processintrinsic apoptotic signaling pathway by p53 class mediator
C0000118cellular_componenthistone deacetylase complex
C0000166molecular_functionnucleotide binding
C0003824molecular_functioncatalytic activity
C0005080molecular_functionprotein kinase C binding
C0005515molecular_functionprotein binding
C0005634cellular_componentnucleus
C0005654cellular_componentnucleoplasm
C0005737cellular_componentcytoplasm
C0005829cellular_componentcytosol
C0005856cellular_componentcytoskeleton
C0005886cellular_componentplasma membrane
C0006355biological_processregulation of DNA-templated transcription
C0006508biological_processproteolysis
C0006790biological_processsulfur compound metabolic process
C0006915biological_processapoptotic process
C0007165biological_processsignal transduction
C0008233molecular_functionpeptidase activity
C0008234molecular_functioncysteine-type peptidase activity
C0009154biological_processpurine ribonucleotide catabolic process
C0016787molecular_functionhydrolase activity
C0016926biological_processprotein desumoylation
C0016929molecular_functiondeSUMOylase activity
C0043530molecular_functionadenosine 5'-monophosphoramidase activity
C0047627molecular_functionadenylylsulfatase activity
C0050850biological_processpositive regulation of calcium-mediated signaling
C0070062cellular_componentextracellular exosome
C0072332biological_processintrinsic apoptotic signaling pathway by p53 class mediator
D0000118cellular_componenthistone deacetylase complex
D0000166molecular_functionnucleotide binding
D0003824molecular_functioncatalytic activity
D0005080molecular_functionprotein kinase C binding
D0005515molecular_functionprotein binding
D0005634cellular_componentnucleus
D0005654cellular_componentnucleoplasm
D0005737cellular_componentcytoplasm
D0005829cellular_componentcytosol
D0005856cellular_componentcytoskeleton
D0005886cellular_componentplasma membrane
D0006355biological_processregulation of DNA-templated transcription
D0006508biological_processproteolysis
D0006790biological_processsulfur compound metabolic process
D0006915biological_processapoptotic process
D0007165biological_processsignal transduction
D0008233molecular_functionpeptidase activity
D0008234molecular_functioncysteine-type peptidase activity
D0009154biological_processpurine ribonucleotide catabolic process
D0016787molecular_functionhydrolase activity
D0016926biological_processprotein desumoylation
D0016929molecular_functiondeSUMOylase activity
D0043530molecular_functionadenosine 5'-monophosphoramidase activity
D0047627molecular_functionadenylylsulfatase activity
D0050850biological_processpositive regulation of calcium-mediated signaling
D0070062cellular_componentextracellular exosome
D0072332biological_processintrinsic apoptotic signaling pathway by p53 class mediator
Functional Information from PDB Data
site_idZNA
Number of Residues3
DetailsTRIAD OF HISTIDINES POTENTIALLY INVOLVED IN ZINC COORDINATION.
ChainResidue
AHIS51
AHIS112
AHIS114

site_idZNB
Number of Residues3
DetailsTRIAD OF HISTIDINES POTENTIALLY INVOLVED IN ZINC COORDINATION.
ChainResidue
BHIS51
BHIS112
BHIS114

site_idZNC
Number of Residues3
DetailsTRIAD OF HISTIDINES POTENTIALLY INVOLVED IN ZINC COORDINATION.
ChainResidue
CHIS51
CHIS112
CHIS114

site_idZND
Number of Residues3
DetailsTRIAD OF HISTIDINES POTENTIALLY INVOLVED IN ZINC COORDINATION.
ChainResidue
DHIS51
DHIS112
DHIS114

Functional Information from PROSITE/UniProt
site_idPS00892
Number of Residues19
DetailsHIT_1 HIT domain signature. NegsdGgQsVyHVHLHVLG
ChainResidueDetails
AASN99-GLY117

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsACT_SITE: Tele-AMP-histidine intermediate => ECO:0000269|PubMed:9323207
ChainResidueDetails
ALEU113
BLEU113
CLEU113
DLEU113

site_idSWS_FT_FI2
Number of Residues16
DetailsBINDING: BINDING => ECO:0000269|PubMed:22869114, ECO:0007744|PDB:3TW2
ChainResidueDetails
AILE44
CGLU100
CGLN106
CLEU113
DILE44
DGLU100
DGLN106
DLEU113
AGLU100
AGLN106
ALEU113
BILE44
BGLU100
BGLN106
BLEU113
CILE44

site_idSWS_FT_FI3
Number of Residues4
DetailsMOD_RES: N-acetylalanine => ECO:0007744|PubMed:22814378
ChainResidueDetails
AASP3
BASP3
CASP3
DASP3

site_idSWS_FT_FI4
Number of Residues8
DetailsMOD_RES: N6-acetyllysine => ECO:0007744|PubMed:19608861
ChainResidueDetails
AILE22
AILE31
BILE22
BILE31
CILE22
CILE31
DILE22
DILE31

site_idSWS_FT_FI5
Number of Residues8
DetailsMOD_RES: Phosphoserine => ECO:0000250|UniProtKB:P70349
ChainResidueDetails
APRO46
ALEU73
BPRO46
BLEU73
CPRO46
CLEU73
DPRO46
DLEU73

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon