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1KG2

Crystal structure of the core fragment of MutY from E.coli at 1.2A resolution

Functional Information from GO Data
ChainGOidnamespacecontents
A0003677molecular_functionDNA binding
A0003824molecular_functioncatalytic activity
A0006281biological_processDNA repair
A0006284biological_processbase-excision repair
A0016798molecular_functionhydrolase activity, acting on glycosyl bonds
A0019104molecular_functionDNA N-glycosylase activity
A0051539molecular_function4 iron, 4 sulfur cluster binding
Functional Information from PDB Data
site_idAC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 A 301
ChainResidue
APRO69
ALEU70
AHOH538
AHOH716

site_idAC2
Number of Residues9
DetailsBINDING SITE FOR RESIDUE SO4 A 302
ChainResidue
AHOH592
AHOH740
AHOH774
AHOH813
AARG19
AGLN44
AVAL45
AALA189
AHOH564

site_idAC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE SF4 A 300
ChainResidue
ACYS148
ACYS192
ACYS199
ACYS202
AGLN205
ACYS208

site_idAC4
Number of Residues7
DetailsBINDING SITE FOR RESIDUE GOL A 310
ChainResidue
AGLN42
ATHR43
AARG58
AASP64
AGLY79
ALEU80
AHOH715

site_idAC5
Number of Residues5
DetailsBINDING SITE FOR RESIDUE GOL A 311
ChainResidue
APHE108
AARG119
AASN213
AHOH512
AHOH543

site_idAC6
Number of Residues10
DetailsBINDING SITE FOR RESIDUE GOL A 312
ChainResidue
ATHR29
APRO30
ATYR31
ATHR61
AVAL62
ALYS103
APHE104
AHOH521
AHOH670
AHOH699

Functional Information from PROSITE/UniProt
site_idPS00764
Number of Residues17
DetailsENDONUCLEASE_III_1 Endonuclease III iron-sulfur binding region signature. CtrsKPKCslCplqngC
ChainResidueDetails
ACYS192-CYS208

site_idPS01155
Number of Residues30
DetailsENDONUCLEASE_III_2 Endonuclease III family signature. GkFPetfeeVaa.LPGVGrstAgaiLslSLG
ChainResidueDetails
AGLY102-GLY131

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsACT_SITE: Proton donor/acceptor => ECO:0000250|UniProtKB:P83847
ChainResidueDetails
AGLU37

site_idSWS_FT_FI2
Number of Residues4
DetailsBINDING:
ChainResidueDetails
ACYS192
ACYS199
ACYS202
ACYS208

site_idSWS_FT_FI3
Number of Residues1
DetailsSITE: Transition state stabilizer => ECO:0000250|UniProtKB:P83847
ChainResidueDetails
AASP138

Catalytic Information from CSA
site_idCSA1
Number of Residues2
DetailsAnnotated By Reference To The Literature 2abk
ChainResidueDetails
AASP138
ASER120

site_idCSA2
Number of Residues2
DetailsAnnotated By Reference To The Literature 2abk
ChainResidueDetails
AASP138
AGLU37

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PDB entries from 2024-07-17

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