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1KDP

CYTIDINE MONOPHOSPHATE KINASE FROM E. COLI IN COMPLEX WITH 2'-DEOXY-CYTIDINE MONOPHOSPHATE

Functional Information from GO Data
ChainGOidnamespacecontents
A0004127molecular_function(d)CMP kinase activity
A0005524molecular_functionATP binding
A0005737cellular_componentcytoplasm
A0005829cellular_componentcytosol
A0006139biological_processnucleobase-containing compound metabolic process
A0006220biological_processpyrimidine nucleotide metabolic process
A0009058biological_processbiosynthetic process
A0010165biological_processresponse to X-ray
A0015949biological_processnucleobase-containing small molecule interconversion
A0016301molecular_functionkinase activity
A0016310biological_processphosphorylation
A0036430molecular_functionCMP kinase activity
A0036431molecular_functiondCMP kinase activity
A0044281biological_processsmall molecule metabolic process
A0046940biological_processnucleoside monophosphate phosphorylation
A0097216molecular_functionguanosine tetraphosphate binding
B0004127molecular_function(d)CMP kinase activity
B0005524molecular_functionATP binding
B0005737cellular_componentcytoplasm
B0005829cellular_componentcytosol
B0006139biological_processnucleobase-containing compound metabolic process
B0006220biological_processpyrimidine nucleotide metabolic process
B0009058biological_processbiosynthetic process
B0010165biological_processresponse to X-ray
B0015949biological_processnucleobase-containing small molecule interconversion
B0016301molecular_functionkinase activity
B0016310biological_processphosphorylation
B0036430molecular_functionCMP kinase activity
B0036431molecular_functiondCMP kinase activity
B0044281biological_processsmall molecule metabolic process
B0046940biological_processnucleoside monophosphate phosphorylation
B0097216molecular_functionguanosine tetraphosphate binding
Functional Information from PDB Data
site_idAC1
Number of Residues8
DetailsBINDING SITE FOR RESIDUE SO4 A 501
ChainResidue
AGLY15
AALA16
AGLY17
ALYS18
AGLY19
AHOH5424
AHOH5459
AHOH5584

site_idAC2
Number of Residues9
DetailsBINDING SITE FOR RESIDUE SO4 B 601
ChainResidue
BSER14
BGLY15
BALA16
BGLY17
BLYS18
BGLY19
BHOH6409
BHOH6442
BPRO13

site_idAC3
Number of Residues14
DetailsBINDING SITE FOR RESIDUE DCM A 5407
ChainResidue
ASER36
AGLY37
ATYR40
AARG41
AALA104
AARG110
AGLY130
AARG131
AASP132
AARG181
AASP185
AARG188
AHOH5411
AHOH5424

site_idAC4
Number of Residues12
DetailsBINDING SITE FOR RESIDUE DCM B 6407
ChainResidue
BSER14
BSER36
BGLY37
BTYR40
BARG41
BSER101
BALA104
BARG110
BARG131
BASP132
BHOH6409
BHOH6447

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsBINDING: BINDING => ECO:0000250
ChainResidueDetails
AGLY12
BGLY12

226707

PDB entries from 2024-10-30

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