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1K6X

Crystal structure of Nmra, a negative transcriptional regulator in complex with NAD at 1.5 A resolution (Trigonal form)

Functional Information from GO Data
ChainGOidnamespacecontents
A0001081biological_processnitrogen catabolite repression of transcription from RNA polymerase II promoter
A0005515molecular_functionprotein binding
A0005634cellular_componentnucleus
A0005737cellular_componentcytoplasm
A0006808biological_processregulation of nitrogen utilization
A0016491molecular_functionoxidoreductase activity
A0045892biological_processnegative regulation of DNA-templated transcription
A0051287molecular_functionNAD binding
A0070401molecular_functionNADP+ binding
A0070402molecular_functionNADPH binding
A0070403molecular_functionNAD+ binding
A0070404molecular_functionNADH binding
A0070405molecular_functionammonium ion binding
A0070406molecular_functionglutamine binding
A0090295biological_processnitrogen catabolite repression of transcription
Functional Information from PDB Data
site_idAC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CL A 360
ChainResidue
ALYS6
AHIS30
AASN253
AHOH690

site_idAC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CL A 361
ChainResidue
AHOH1095
AGLN48
AILE50
AVAL53
AHOH521
AHOH731

site_idAC3
Number of Residues7
DetailsBINDING SITE FOR RESIDUE CL A 362
ChainResidue
AARG139
ALEU141
ALEU143
AASN346
AHOH953
AHOH959
AHOH1044

site_idAC4
Number of Residues5
DetailsBINDING SITE FOR RESIDUE CL A 363
ChainResidue
AGLN106
APRO208
AVAL252
AASN253
AHOH410

site_idAC5
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CL A 401
ChainResidue
AASN12
ATHR14
AVAL36
AHIS37

site_idAC6
Number of Residues5
DetailsBINDING SITE FOR RESIDUE CL A 402
ChainResidue
ASER38
ALYS40
AHOH511
AHOH563
AHOH778

site_idAC7
Number of Residues30
DetailsBINDING SITE FOR RESIDUE NAD A 400
ChainResidue
AASN12
ATHR14
AGLY15
AARG16
AGLN17
AHIS37
AASN80
ATHR81
ATHR82
AGLN84
AALA85
AMET113
ALYS131
AALA150
AGLY151
AILE152
ATYR153
AASN156
ATYR276
AHOH422
AHOH520
AHOH537
AHOH584
AHOH591
AHOH603
AHOH699
AHOH702
AHOH750
AHOH777
AHOH802

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues5
DetailsBINDING: BINDING => ECO:0000269|PubMed:12764138, ECO:0007744|PDB:1TI7
ChainResidueDetails
AASN12
AHIS37
AASN80
ALYS131
ATYR153

site_idSWS_FT_FI2
Number of Residues1
DetailsBINDING: BINDING => ECO:0000269|PubMed:11726498, ECO:0007744|PDB:1K6X
ChainResidueDetails
AARG16

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PDB entries from 2024-07-10

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