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1K6S

STRUCTURE OF THE CLASS D BETA-LACTAMASE OXA-10 IN COMPLEX WITH A PHENYLBORONIC ACID

Functional Information from GO Data
ChainGOidnamespacecontents
A0005886cellular_componentplasma membrane
A0008658molecular_functionpenicillin binding
A0008800molecular_functionbeta-lactamase activity
A0016787molecular_functionhydrolase activity
A0017001biological_processantibiotic catabolic process
A0042597cellular_componentperiplasmic space
A0046677biological_processresponse to antibiotic
A0071555biological_processcell wall organization
B0005886cellular_componentplasma membrane
B0008658molecular_functionpenicillin binding
B0008800molecular_functionbeta-lactamase activity
B0016787molecular_functionhydrolase activity
B0017001biological_processantibiotic catabolic process
B0042597cellular_componentperiplasmic space
B0046677biological_processresponse to antibiotic
B0071555biological_processcell wall organization
Functional Information from PDB Data
site_idAC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CA B 301
ChainResidue
AGLU190
BHIS203
BGLU227
BHOH355

site_idAC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CA A 302
ChainResidue
AHIS203
AGLU227
BGLU190
BHOH357

site_idAC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CA A 303
ChainResidue
AARG250
AIAP300
AHOH488
APHE208

site_idAC4
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 A 304
ChainResidue
AASP93
AARG97
APRO118
AHOH334
AHOH343

site_idAC5
Number of Residues13
DetailsBINDING SITE FOR RESIDUE IAP A 300
ChainResidue
AALA66
ASER67
AKCX70
AMET99
ATRP102
ASER115
AVAL117
AGLU129
AVAL130
AGLY207
APHE208
ACA303
AHOH358

site_idAC6
Number of Residues10
DetailsBINDING SITE FOR RESIDUE IAP B 300
ChainResidue
BALA66
BSER67
BKCX70
BMET99
BTRP102
BSER115
BVAL117
BGLY207
BPHE208
BHOH344

Functional Information from PROSITE/UniProt
site_idPS00337
Number of Residues11
DetailsBETA_LACTAMASE_D Beta-lactamase class-D active site. PaSTFKIPnAI
ChainResidueDetails
APRO65-ILE75

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsACT_SITE: Acyl-ester intermediate => ECO:0000269|PubMed:11724923, ECO:0000269|PubMed:19860471, ECO:0007744|PDB:1K54, ECO:0007744|PDB:2WGI
ChainResidueDetails
ASER67
BSER67

site_idSWS_FT_FI2
Number of Residues8
DetailsBINDING: BINDING => ECO:0000269|PubMed:19860471, ECO:0007744|PDB:2WGI
ChainResidueDetails
ASER115
ATHR206
APHE208
AARG250
BSER115
BTHR206
BPHE208
BARG250

site_idSWS_FT_FI3
Number of Residues2
DetailsMOD_RES: N6-carboxylysine => ECO:0000269|PubMed:11188693, ECO:0000269|PubMed:11724923, ECO:0000269|PubMed:19860471, ECO:0007744|PDB:1E4D, ECO:0007744|PDB:1K4E, ECO:0007744|PDB:1K4F, ECO:0007744|PDB:1K54, ECO:0007744|PDB:1K55, ECO:0007744|PDB:1K56, ECO:0007744|PDB:1K57, ECO:0007744|PDB:1K6S, ECO:0007744|PDB:2RL3
ChainResidueDetails
AKCX70
BKCX70

Catalytic Information from CSA
site_idCSA1
Number of Residues1
DetailsAnnotated By Reference To The Literature 1m6k
ChainResidueDetails
ASER67

site_idCSA2
Number of Residues1
DetailsAnnotated By Reference To The Literature 1m6k
ChainResidueDetails
BSER67

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PDB entries from 2025-02-05

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