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1K6E

COMPLEX OF HYDROLYTIC HALOALKANE DEHALOGENASE LINB FROM SPHINGOMONAS PAUCIMOBILIS UT26 WITH 1,2-PROPANEDIOL (PRODUCT OF DEHALOGENATION OF 1,2-DIBROMOPROPANE) AT 1.85A

Functional Information from GO Data
ChainGOidnamespacecontents
A0003824molecular_functioncatalytic activity
A0009636biological_processresponse to toxic substance
A0016787molecular_functionhydrolase activity
A0018786molecular_functionhaloalkane dehalogenase activity
A0042597cellular_componentperiplasmic space
Functional Information from PDB Data
site_idAC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE BR A 1001
ChainResidue
AASN38
ATRP109
APHE169
APRO208
APGO2001

site_idAC2
Number of Residues3
DetailsBINDING SITE FOR RESIDUE BR A 1002
ChainResidue
ATHR216
APRO217
AALA218

site_idAC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CL A 1003
ChainResidue
ATRP109
APHE169
APRO208
AASN38

site_idAC4
Number of Residues3
DetailsBINDING SITE FOR RESIDUE CL A 1004
ChainResidue
ATHR216
APRO217
AALA218

site_idAC5
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG A 1005
ChainResidue
AHOH2158
AHOH2164
AHOH2208
AHOH2293
AHOH2294
AHOH2310

site_idAC6
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG A 1006
ChainResidue
AHOH2016
AHOH2145
AHOH2146
AHOH2162
AHOH2235
AHOH2236

site_idAC7
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG A 1007
ChainResidue
AHOH2060
AHOH2066
AHOH2078
AHOH2238
AHOH2298
AHOH2301

site_idAC8
Number of Residues5
DetailsBINDING SITE FOR RESIDUE PGO A 2001
ChainResidue
AASP108
APHE143
ALEU248
ABR1001
AHOH2004

site_idAC9
Number of Residues4
DetailsBINDING SITE FOR RESIDUE 1BP A 2002
ChainResidue
AASP108
APHE151
AHIS272
AHOH2004

site_idBC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE 1BP A 2003
ChainResidue
AASP108
APHE143
APHE151
ALEU177
AHIS272

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues124
DetailsDomain: {"description":"AB hydrolase-1","evidences":[{"evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues1
DetailsActive site: {"description":"Nucleophile","evidences":[{"source":"PubMed","id":"10100638","evidenceCode":"ECO:0000305"},{"source":"PubMed","id":"12939138","evidenceCode":"ECO:0000305"},{"source":"PubMed","id":"14744129","evidenceCode":"ECO:0000305"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues1
DetailsActive site: {"description":"Proton donor","evidences":[{"source":"PubMed","id":"10100638","evidenceCode":"ECO:0000305"},{"source":"PubMed","id":"12939138","evidenceCode":"ECO:0000305"},{"source":"PubMed","id":"14744129","evidenceCode":"ECO:0000305"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues1
DetailsActive site: {"description":"Proton acceptor","evidences":[{"source":"PubMed","id":"10100638","evidenceCode":"ECO:0000305"},{"source":"PubMed","id":"12939138","evidenceCode":"ECO:0000305"},{"source":"PubMed","id":"14744129","evidenceCode":"ECO:0000305"}]}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues1
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"14744129","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI6
Number of Residues1
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"14744129","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"17259360","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1MJ5","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2BFN","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

Catalytic Information from CSA
site_idCSA1
Number of Residues4
DetailsAnnotated By Reference To The Literature 1cv2
ChainResidueDetails
AHIS272
ATRP109
AGLU132
AASP108

site_idMCSA1
Number of Residues5
DetailsM-CSA 467
ChainResidueDetails
AASN38electrostatic stabiliser
AASP108covalent catalysis
ATRP109electrostatic stabiliser
AGLU132activator, electrostatic stabiliser
AHIS272activator, electrostatic stabiliser, proton shuttle (general acid/base)

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PDB entries from 2025-11-19

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