Summary Structural details Experimental details Functional details Sequence Neighbor History Downloads

1JTS

DNA PROTECTION AND BINDING BY E. COLI DPS PROTEIN

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0003677	molecular_function	DNA binding
A	0005515	molecular_function	protein binding
A	0005737	cellular_component	cytoplasm
A	0006879	biological_process	intracellular iron ion homeostasis
A	0006950	biological_process	response to stress
A	0008199	molecular_function	ferric iron binding
A	0009295	cellular_component	nucleoid
A	0016020	cellular_component	membrane
A	0016491	molecular_function	oxidoreductase activity
A	0016722	molecular_function	oxidoreductase activity, acting on metal ions
A	0030261	biological_process	chromosome condensation
A	0032297	biological_process	negative regulation of DNA-templated DNA replication initiation
A	0042594	biological_process	response to starvation
A	0042802	molecular_function	identical protein binding
A	0046872	molecular_function	metal ion binding
A	1990084	cellular_component	DnaA-Dps complex
B	0003677	molecular_function	DNA binding
B	0005515	molecular_function	protein binding
B	0005737	cellular_component	cytoplasm
B	0006879	biological_process	intracellular iron ion homeostasis
B	0006950	biological_process	response to stress
B	0008199	molecular_function	ferric iron binding
B	0009295	cellular_component	nucleoid
B	0016020	cellular_component	membrane
B	0016491	molecular_function	oxidoreductase activity
B	0016722	molecular_function	oxidoreductase activity, acting on metal ions
B	0030261	biological_process	chromosome condensation
B	0032297	biological_process	negative regulation of DNA-templated DNA replication initiation
B	0042594	biological_process	response to starvation
B	0042802	molecular_function	identical protein binding
B	0046872	molecular_function	metal ion binding
B	1990084	cellular_component	DnaA-Dps complex
C	0003677	molecular_function	DNA binding
C	0005515	molecular_function	protein binding
C	0005737	cellular_component	cytoplasm
C	0006879	biological_process	intracellular iron ion homeostasis
C	0006950	biological_process	response to stress
C	0008199	molecular_function	ferric iron binding
C	0009295	cellular_component	nucleoid
C	0016020	cellular_component	membrane
C	0016491	molecular_function	oxidoreductase activity
C	0016722	molecular_function	oxidoreductase activity, acting on metal ions
C	0030261	biological_process	chromosome condensation
C	0032297	biological_process	negative regulation of DNA-templated DNA replication initiation
C	0042594	biological_process	response to starvation
C	0042802	molecular_function	identical protein binding
C	0046872	molecular_function	metal ion binding
C	1990084	cellular_component	DnaA-Dps complex
D	0003677	molecular_function	DNA binding
D	0005515	molecular_function	protein binding
D	0005737	cellular_component	cytoplasm
D	0006879	biological_process	intracellular iron ion homeostasis
D	0006950	biological_process	response to stress
D	0008199	molecular_function	ferric iron binding
D	0009295	cellular_component	nucleoid
D	0016020	cellular_component	membrane
D	0016491	molecular_function	oxidoreductase activity
D	0016722	molecular_function	oxidoreductase activity, acting on metal ions
D	0030261	biological_process	chromosome condensation
D	0032297	biological_process	negative regulation of DNA-templated DNA replication initiation
D	0042594	biological_process	response to starvation
D	0042802	molecular_function	identical protein binding
D	0046872	molecular_function	metal ion binding
D	1990084	cellular_component	DnaA-Dps complex
E	0003677	molecular_function	DNA binding
E	0005515	molecular_function	protein binding
E	0005737	cellular_component	cytoplasm
E	0006879	biological_process	intracellular iron ion homeostasis
E	0006950	biological_process	response to stress
E	0008199	molecular_function	ferric iron binding
E	0009295	cellular_component	nucleoid
E	0016020	cellular_component	membrane
E	0016491	molecular_function	oxidoreductase activity
E	0016722	molecular_function	oxidoreductase activity, acting on metal ions
E	0030261	biological_process	chromosome condensation
E	0032297	biological_process	negative regulation of DNA-templated DNA replication initiation
E	0042594	biological_process	response to starvation
E	0042802	molecular_function	identical protein binding
E	0046872	molecular_function	metal ion binding
E	1990084	cellular_component	DnaA-Dps complex
F	0003677	molecular_function	DNA binding
F	0005515	molecular_function	protein binding
F	0005737	cellular_component	cytoplasm
F	0006879	biological_process	intracellular iron ion homeostasis
F	0006950	biological_process	response to stress
F	0008199	molecular_function	ferric iron binding
F	0009295	cellular_component	nucleoid
F	0016020	cellular_component	membrane
F	0016491	molecular_function	oxidoreductase activity
F	0016722	molecular_function	oxidoreductase activity, acting on metal ions
F	0030261	biological_process	chromosome condensation
F	0032297	biological_process	negative regulation of DNA-templated DNA replication initiation
F	0042594	biological_process	response to starvation
F	0042802	molecular_function	identical protein binding
F	0046872	molecular_function	metal ion binding
F	1990084	cellular_component	DnaA-Dps complex
G	0003677	molecular_function	DNA binding
G	0005515	molecular_function	protein binding
G	0005737	cellular_component	cytoplasm
G	0006879	biological_process	intracellular iron ion homeostasis
G	0006950	biological_process	response to stress
G	0008199	molecular_function	ferric iron binding
G	0009295	cellular_component	nucleoid
G	0016020	cellular_component	membrane
G	0016491	molecular_function	oxidoreductase activity
G	0016722	molecular_function	oxidoreductase activity, acting on metal ions
G	0030261	biological_process	chromosome condensation
G	0032297	biological_process	negative regulation of DNA-templated DNA replication initiation
G	0042594	biological_process	response to starvation
G	0042802	molecular_function	identical protein binding
G	0046872	molecular_function	metal ion binding
G	1990084	cellular_component	DnaA-Dps complex
H	0003677	molecular_function	DNA binding
H	0005515	molecular_function	protein binding
H	0005737	cellular_component	cytoplasm
H	0006879	biological_process	intracellular iron ion homeostasis
H	0006950	biological_process	response to stress
H	0008199	molecular_function	ferric iron binding
H	0009295	cellular_component	nucleoid
H	0016020	cellular_component	membrane
H	0016491	molecular_function	oxidoreductase activity
H	0016722	molecular_function	oxidoreductase activity, acting on metal ions
H	0030261	biological_process	chromosome condensation
H	0032297	biological_process	negative regulation of DNA-templated DNA replication initiation
H	0042594	biological_process	response to starvation
H	0042802	molecular_function	identical protein binding
H	0046872	molecular_function	metal ion binding
H	1990084	cellular_component	DnaA-Dps complex
I	0003677	molecular_function	DNA binding
I	0005515	molecular_function	protein binding
I	0005737	cellular_component	cytoplasm
I	0006879	biological_process	intracellular iron ion homeostasis
I	0006950	biological_process	response to stress
I	0008199	molecular_function	ferric iron binding
I	0009295	cellular_component	nucleoid
I	0016020	cellular_component	membrane
I	0016491	molecular_function	oxidoreductase activity
I	0016722	molecular_function	oxidoreductase activity, acting on metal ions
I	0030261	biological_process	chromosome condensation
I	0032297	biological_process	negative regulation of DNA-templated DNA replication initiation
I	0042594	biological_process	response to starvation
I	0042802	molecular_function	identical protein binding
I	0046872	molecular_function	metal ion binding
I	1990084	cellular_component	DnaA-Dps complex
J	0003677	molecular_function	DNA binding
J	0005515	molecular_function	protein binding
J	0005737	cellular_component	cytoplasm
J	0006879	biological_process	intracellular iron ion homeostasis
J	0006950	biological_process	response to stress
J	0008199	molecular_function	ferric iron binding
J	0009295	cellular_component	nucleoid
J	0016020	cellular_component	membrane
J	0016491	molecular_function	oxidoreductase activity
J	0016722	molecular_function	oxidoreductase activity, acting on metal ions
J	0030261	biological_process	chromosome condensation
J	0032297	biological_process	negative regulation of DNA-templated DNA replication initiation
J	0042594	biological_process	response to starvation
J	0042802	molecular_function	identical protein binding
J	0046872	molecular_function	metal ion binding
J	1990084	cellular_component	DnaA-Dps complex
K	0003677	molecular_function	DNA binding
K	0005515	molecular_function	protein binding
K	0005737	cellular_component	cytoplasm
K	0006879	biological_process	intracellular iron ion homeostasis
K	0006950	biological_process	response to stress
K	0008199	molecular_function	ferric iron binding
K	0009295	cellular_component	nucleoid
K	0016020	cellular_component	membrane
K	0016491	molecular_function	oxidoreductase activity
K	0016722	molecular_function	oxidoreductase activity, acting on metal ions
K	0030261	biological_process	chromosome condensation
K	0032297	biological_process	negative regulation of DNA-templated DNA replication initiation
K	0042594	biological_process	response to starvation
K	0042802	molecular_function	identical protein binding
K	0046872	molecular_function	metal ion binding
K	1990084	cellular_component	DnaA-Dps complex
L	0003677	molecular_function	DNA binding
L	0005515	molecular_function	protein binding
L	0005737	cellular_component	cytoplasm
L	0006879	biological_process	intracellular iron ion homeostasis
L	0006950	biological_process	response to stress
L	0008199	molecular_function	ferric iron binding
L	0009295	cellular_component	nucleoid
L	0016020	cellular_component	membrane
L	0016491	molecular_function	oxidoreductase activity
L	0016722	molecular_function	oxidoreductase activity, acting on metal ions
L	0030261	biological_process	chromosome condensation
L	0032297	biological_process	negative regulation of DNA-templated DNA replication initiation
L	0042594	biological_process	response to starvation
L	0042802	molecular_function	identical protein binding
L	0046872	molecular_function	metal ion binding
L	1990084	cellular_component	DnaA-Dps complex
M	0003677	molecular_function	DNA binding
M	0005515	molecular_function	protein binding
M	0005737	cellular_component	cytoplasm
M	0006879	biological_process	intracellular iron ion homeostasis
M	0006950	biological_process	response to stress
M	0008199	molecular_function	ferric iron binding
M	0009295	cellular_component	nucleoid
M	0016020	cellular_component	membrane
M	0016491	molecular_function	oxidoreductase activity
M	0016722	molecular_function	oxidoreductase activity, acting on metal ions
M	0030261	biological_process	chromosome condensation
M	0032297	biological_process	negative regulation of DNA-templated DNA replication initiation
M	0042594	biological_process	response to starvation
M	0042802	molecular_function	identical protein binding
M	0046872	molecular_function	metal ion binding
M	1990084	cellular_component	DnaA-Dps complex
N	0003677	molecular_function	DNA binding
N	0005515	molecular_function	protein binding
N	0005737	cellular_component	cytoplasm
N	0006879	biological_process	intracellular iron ion homeostasis
N	0006950	biological_process	response to stress
N	0008199	molecular_function	ferric iron binding
N	0009295	cellular_component	nucleoid
N	0016020	cellular_component	membrane
N	0016491	molecular_function	oxidoreductase activity
N	0016722	molecular_function	oxidoreductase activity, acting on metal ions
N	0030261	biological_process	chromosome condensation
N	0032297	biological_process	negative regulation of DNA-templated DNA replication initiation
N	0042594	biological_process	response to starvation
N	0042802	molecular_function	identical protein binding
N	0046872	molecular_function	metal ion binding
N	1990084	cellular_component	DnaA-Dps complex
O	0003677	molecular_function	DNA binding
O	0005515	molecular_function	protein binding
O	0005737	cellular_component	cytoplasm
O	0006879	biological_process	intracellular iron ion homeostasis
O	0006950	biological_process	response to stress
O	0008199	molecular_function	ferric iron binding
O	0009295	cellular_component	nucleoid
O	0016020	cellular_component	membrane
O	0016491	molecular_function	oxidoreductase activity
O	0016722	molecular_function	oxidoreductase activity, acting on metal ions
O	0030261	biological_process	chromosome condensation
O	0032297	biological_process	negative regulation of DNA-templated DNA replication initiation
O	0042594	biological_process	response to starvation
O	0042802	molecular_function	identical protein binding
O	0046872	molecular_function	metal ion binding
O	1990084	cellular_component	DnaA-Dps complex
P	0003677	molecular_function	DNA binding
P	0005515	molecular_function	protein binding
P	0005737	cellular_component	cytoplasm
P	0006879	biological_process	intracellular iron ion homeostasis
P	0006950	biological_process	response to stress
P	0008199	molecular_function	ferric iron binding
P	0009295	cellular_component	nucleoid
P	0016020	cellular_component	membrane
P	0016491	molecular_function	oxidoreductase activity
P	0016722	molecular_function	oxidoreductase activity, acting on metal ions
P	0030261	biological_process	chromosome condensation
P	0032297	biological_process	negative regulation of DNA-templated DNA replication initiation
P	0042594	biological_process	response to starvation
P	0042802	molecular_function	identical protein binding
P	0046872	molecular_function	metal ion binding
P	1990084	cellular_component	DnaA-Dps complex
Q	0003677	molecular_function	DNA binding
Q	0005515	molecular_function	protein binding
Q	0005737	cellular_component	cytoplasm
Q	0006879	biological_process	intracellular iron ion homeostasis
Q	0006950	biological_process	response to stress
Q	0008199	molecular_function	ferric iron binding
Q	0009295	cellular_component	nucleoid
Q	0016020	cellular_component	membrane
Q	0016491	molecular_function	oxidoreductase activity
Q	0016722	molecular_function	oxidoreductase activity, acting on metal ions
Q	0030261	biological_process	chromosome condensation
Q	0032297	biological_process	negative regulation of DNA-templated DNA replication initiation
Q	0042594	biological_process	response to starvation
Q	0042802	molecular_function	identical protein binding
Q	0046872	molecular_function	metal ion binding
Q	1990084	cellular_component	DnaA-Dps complex
R	0003677	molecular_function	DNA binding
R	0005515	molecular_function	protein binding
R	0005737	cellular_component	cytoplasm
R	0006879	biological_process	intracellular iron ion homeostasis
R	0006950	biological_process	response to stress
R	0008199	molecular_function	ferric iron binding
R	0009295	cellular_component	nucleoid
R	0016020	cellular_component	membrane
R	0016491	molecular_function	oxidoreductase activity
R	0016722	molecular_function	oxidoreductase activity, acting on metal ions
R	0030261	biological_process	chromosome condensation
R	0032297	biological_process	negative regulation of DNA-templated DNA replication initiation
R	0042594	biological_process	response to starvation
R	0042802	molecular_function	identical protein binding
R	0046872	molecular_function	metal ion binding
R	1990084	cellular_component	DnaA-Dps complex
S	0003677	molecular_function	DNA binding
S	0005515	molecular_function	protein binding
S	0005737	cellular_component	cytoplasm
S	0006879	biological_process	intracellular iron ion homeostasis
S	0006950	biological_process	response to stress
S	0008199	molecular_function	ferric iron binding
S	0009295	cellular_component	nucleoid
S	0016020	cellular_component	membrane
S	0016491	molecular_function	oxidoreductase activity
S	0016722	molecular_function	oxidoreductase activity, acting on metal ions
S	0030261	biological_process	chromosome condensation
S	0032297	biological_process	negative regulation of DNA-templated DNA replication initiation
S	0042594	biological_process	response to starvation
S	0042802	molecular_function	identical protein binding
S	0046872	molecular_function	metal ion binding
S	1990084	cellular_component	DnaA-Dps complex
T	0003677	molecular_function	DNA binding
T	0005515	molecular_function	protein binding
T	0005737	cellular_component	cytoplasm
T	0006879	biological_process	intracellular iron ion homeostasis
T	0006950	biological_process	response to stress
T	0008199	molecular_function	ferric iron binding
T	0009295	cellular_component	nucleoid
T	0016020	cellular_component	membrane
T	0016491	molecular_function	oxidoreductase activity
T	0016722	molecular_function	oxidoreductase activity, acting on metal ions
T	0030261	biological_process	chromosome condensation
T	0032297	biological_process	negative regulation of DNA-templated DNA replication initiation
T	0042594	biological_process	response to starvation
T	0042802	molecular_function	identical protein binding
T	0046872	molecular_function	metal ion binding
T	1990084	cellular_component	DnaA-Dps complex
U	0003677	molecular_function	DNA binding
U	0005515	molecular_function	protein binding
U	0005737	cellular_component	cytoplasm
U	0006879	biological_process	intracellular iron ion homeostasis
U	0006950	biological_process	response to stress
U	0008199	molecular_function	ferric iron binding
U	0009295	cellular_component	nucleoid
U	0016020	cellular_component	membrane
U	0016491	molecular_function	oxidoreductase activity
U	0016722	molecular_function	oxidoreductase activity, acting on metal ions
U	0030261	biological_process	chromosome condensation
U	0032297	biological_process	negative regulation of DNA-templated DNA replication initiation
U	0042594	biological_process	response to starvation
U	0042802	molecular_function	identical protein binding
U	0046872	molecular_function	metal ion binding
U	1990084	cellular_component	DnaA-Dps complex
V	0003677	molecular_function	DNA binding
V	0005515	molecular_function	protein binding
V	0005737	cellular_component	cytoplasm
V	0006879	biological_process	intracellular iron ion homeostasis
V	0006950	biological_process	response to stress
V	0008199	molecular_function	ferric iron binding
V	0009295	cellular_component	nucleoid
V	0016020	cellular_component	membrane
V	0016491	molecular_function	oxidoreductase activity
V	0016722	molecular_function	oxidoreductase activity, acting on metal ions
V	0030261	biological_process	chromosome condensation
V	0032297	biological_process	negative regulation of DNA-templated DNA replication initiation
V	0042594	biological_process	response to starvation
V	0042802	molecular_function	identical protein binding
V	0046872	molecular_function	metal ion binding
V	1990084	cellular_component	DnaA-Dps complex
W	0003677	molecular_function	DNA binding
W	0005515	molecular_function	protein binding
W	0005737	cellular_component	cytoplasm
W	0006879	biological_process	intracellular iron ion homeostasis
W	0006950	biological_process	response to stress
W	0008199	molecular_function	ferric iron binding
W	0009295	cellular_component	nucleoid
W	0016020	cellular_component	membrane
W	0016491	molecular_function	oxidoreductase activity
W	0016722	molecular_function	oxidoreductase activity, acting on metal ions
W	0030261	biological_process	chromosome condensation
W	0032297	biological_process	negative regulation of DNA-templated DNA replication initiation
W	0042594	biological_process	response to starvation
W	0042802	molecular_function	identical protein binding
W	0046872	molecular_function	metal ion binding
W	1990084	cellular_component	DnaA-Dps complex
X	0003677	molecular_function	DNA binding
X	0005515	molecular_function	protein binding
X	0005737	cellular_component	cytoplasm
X	0006879	biological_process	intracellular iron ion homeostasis
X	0006950	biological_process	response to stress
X	0008199	molecular_function	ferric iron binding
X	0009295	cellular_component	nucleoid
X	0016020	cellular_component	membrane
X	0016491	molecular_function	oxidoreductase activity
X	0016722	molecular_function	oxidoreductase activity, acting on metal ions
X	0030261	biological_process	chromosome condensation
X	0032297	biological_process	negative regulation of DNA-templated DNA replication initiation
X	0042594	biological_process	response to starvation
X	0042802	molecular_function	identical protein binding
X	0046872	molecular_function	metal ion binding
X	1990084	cellular_component	DnaA-Dps complex

Functional Information from PDB Data

site_id	AC1
Number of Residues	3
Details	BINDING SITE FOR RESIDUE TRS A 301

Chain	Residue
A	ASP146
E	ASP146
I	ASP146

site_id	AC2
Number of Residues	2
Details	BINDING SITE FOR RESIDUE TRS G 302

Chain	Residue
G	GLU64
K	GLU64

site_id	AC3
Number of Residues	3
Details	BINDING SITE FOR RESIDUE TRS G 303

Chain	Residue
C	GLU167
G	GLU167
K	GLU167

site_id	AC4
Number of Residues	3
Details	BINDING SITE FOR RESIDUE TRS H 304

Chain	Residue
H	ASP146
K	ASP146
B	ASP146

site_id	AC5
Number of Residues	3
Details	BINDING SITE FOR RESIDUE TRS D 305

Chain	Residue
D	GLU64
D	HOH718
I	GLU64

site_id	AC6
Number of Residues	3
Details	BINDING SITE FOR RESIDUE TRS D 306

Chain	Residue
D	GLU167
F	GLU167
I	GLU167

site_id	AC7
Number of Residues	3
Details	BINDING SITE FOR RESIDUE TRS C 307

Chain	Residue
C	ASP146
F	ASP146
L	ASP146

site_id	AC8
Number of Residues	3
Details	BINDING SITE FOR RESIDUE TRS H 308

Chain	Residue
A	GLU64
H	GLU64
H	HOH561

site_id	AC9
Number of Residues	3
Details	BINDING SITE FOR RESIDUE TRS A 309

Chain	Residue
A	GLU167
H	GLU167
J	GLU167

site_id	BC1
Number of Residues	3
Details	BINDING SITE FOR RESIDUE TRS D 310

Chain	Residue
D	ASP146
G	ASP146
J	ASP146

site_id	BC2
Number of Residues	2
Details	BINDING SITE FOR RESIDUE TRS L 311

Chain	Residue
E	GLU64
L	GLU64

site_id	BC3
Number of Residues	3
Details	BINDING SITE FOR RESIDUE TRS E 312

Chain	Residue
B	GLU167
E	GLU167
L	GLU167

site_id	BC4
Number of Residues	3
Details	BINDING SITE FOR RESIDUE TRS M 313

Chain	Residue
M	ASP146
Q	ASP146
U	ASP146

site_id	BC5
Number of Residues	2
Details	BINDING SITE FOR RESIDUE TRS W 314

Chain	Residue
S	GLU64
W	GLU64

site_id	BC6
Number of Residues	3
Details	BINDING SITE FOR RESIDUE TRS W 315

Chain	Residue
O	GLU167
S	GLU167
W	GLU167

site_id	BC7
Number of Residues	3
Details	BINDING SITE FOR RESIDUE TRS T 316

Chain	Residue
N	ASP146
T	ASP146
W	ASP146

site_id	BC8
Number of Residues	2
Details	BINDING SITE FOR RESIDUE TRS P 317

Chain	Residue
P	GLU64
U	GLU64

site_id	BC9
Number of Residues	3
Details	BINDING SITE FOR RESIDUE TRS P 318

Chain	Residue
P	GLU167
R	GLU167
U	GLU167

site_id	CC1
Number of Residues	3
Details	BINDING SITE FOR RESIDUE TRS R 319

Chain	Residue
O	ASP146
R	ASP146
X	ASP146

site_id	CC2
Number of Residues	3
Details	BINDING SITE FOR RESIDUE TRS T 320

Chain	Residue
M	GLU64
T	GLU64
T	HOH715

site_id	CC3
Number of Residues	3
Details	BINDING SITE FOR RESIDUE TRS M 321

Chain	Residue
M	GLU167
T	GLU167
V	GLU167

site_id	CC4
Number of Residues	3
Details	BINDING SITE FOR RESIDUE TRS P 322

Chain	Residue
P	ASP146
S	ASP146
V	ASP146

site_id	CC5
Number of Residues	3
Details	BINDING SITE FOR RESIDUE TRS X 323

Chain	Residue
N	HOH559
Q	GLU64
X	GLU64

site_id	CC6
Number of Residues	3
Details	BINDING SITE FOR RESIDUE TRS Q 324

Chain	Residue
N	GLU167
Q	GLU167
X	GLU167

Functional Information from PROSITE/UniProt

site_id	PS00818
Number of Residues	17
Details	DPS_1 Dps protein family signature 1. HWnMrGanfiaVHemlD

Chain	Residue	Details
A	HIS51-ASP67

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	24
Details	Binding site: {}

Chain

Residue

Details

site_id	SWS_FT_FI2
Number of Residues	24
Details	Binding site: {"description":"in other chain"}

Chain

Residue

Details

site_id	SWS_FT_FI3
Number of Residues	24
Details	Binding site: {"evidences":[{"evidenceCode":"ECO:0000305"}]}

Chain

Residue

Details

		Sequence (fasta)
		PDBx/mmCIF
		PDBML format (no-atom)
		PDB format (full)
		Validation report (PDF)
		EDMap 2fo-fc (MTZ)