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1JSZ

Crystal Structure Analysis of N7,9-dimethylguanine-VP39 complex

Functional Information from GO Data
ChainGOidnamespacecontents
A0003723molecular_functionRNA binding
A0003746molecular_functiontranslation elongation factor activity
A0004483molecular_functionmRNA (nucleoside-2'-O-)-methyltransferase activity
A0006370biological_process7-methylguanosine mRNA capping
A0008168molecular_functionmethyltransferase activity
A0031440biological_processregulation of mRNA 3'-end processing
A0032259biological_processmethylation
A0044423cellular_componentvirion component
Functional Information from PDB Data
site_idAC1
Number of Residues18
DetailsBINDING SITE FOR RESIDUE SAH A 400
ChainResidue
AGLN39
AHIS74
AASP95
AARG97
APHE115
AVAL116
AASP138
AVAL139
AARG140
ALEU159
ALEU42
ATYR66
AILE67
AGLY68
ASER69
AALA70
APRO71
AGLY72

site_idAC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE NDM A 600
ChainResidue
ATYR22
APHE180
AASP182
ATYR204
AGLU233
AHOH626

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsACT_SITE: For methyltransferase activity => ECO:0000305|PubMed:15134442
ChainResidueDetails
ALYS175

site_idSWS_FT_FI2
Number of Residues5
DetailsBINDING:
ChainResidueDetails
ATYR22
AARG177
AASP182
ASER205
AGLU233

site_idSWS_FT_FI3
Number of Residues8
DetailsBINDING: BINDING => ECO:0000255|PROSITE-ProRule:PRU00944, ECO:0000269|PubMed:8612277
ChainResidueDetails
AGLN39
ATYR66
AGLY68
AGLY72
AASP95
AARG97
AVAL116
AASP138

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PDB entries from 2024-11-06

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