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1JQV

The K213E mutant of Lactococcus lactis Dihydroorotate dehydrogenase A

Functional Information from GO Data
ChainGOidnamespacecontents
A0004152molecular_functiondihydroorotate dehydrogenase activity
A0005737cellular_componentcytoplasm
A0006207biological_process'de novo' pyrimidine nucleobase biosynthetic process
A0006221biological_processpyrimidine nucleotide biosynthetic process
A0006222biological_processUMP biosynthetic process
A0016491molecular_functionoxidoreductase activity
A0016627molecular_functionoxidoreductase activity, acting on the CH-CH group of donors
A0044205biological_process'de novo' UMP biosynthetic process
A1990663molecular_functiondihydroorotate dehydrogenase (fumarate) activity
B0004152molecular_functiondihydroorotate dehydrogenase activity
B0005737cellular_componentcytoplasm
B0006207biological_process'de novo' pyrimidine nucleobase biosynthetic process
B0006221biological_processpyrimidine nucleotide biosynthetic process
B0006222biological_processUMP biosynthetic process
B0016491molecular_functionoxidoreductase activity
B0016627molecular_functionoxidoreductase activity, acting on the CH-CH group of donors
B0044205biological_process'de novo' UMP biosynthetic process
B1990663molecular_functiondihydroorotate dehydrogenase (fumarate) activity
Functional Information from PDB Data
site_idAC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG A 314
ChainResidue
ALYS33
ASER35
AHOH1328
AHOH1398
AHOH1416
AHOH1448

site_idAC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MG B 314
ChainResidue
BHOH2405
BHOH2418
BLYS33
BSER35
BHOH2353

site_idAC3
Number of Residues23
DetailsBINDING SITE FOR RESIDUE FMN A 1312
ChainResidue
AALA18
ASER19
AGLY20
ALYS43
ASER44
ATYR58
AASN67
AMET69
AASN127
ALYS164
AVAL192
AASN193
AGLY221
ATHR248
AGLY249
AGLY250
AGLY271
ATHR272
AORO1313
AHOH1314
AHOH1317
AHOH1318
AHOH1562

site_idAC4
Number of Residues12
DetailsBINDING SITE FOR RESIDUE ORO A 1313
ChainResidue
ALYS43
AASN67
AMET69
AGLY70
ALEU71
AASN127
AASN193
ASER194
AACY1004
AFMN1312
AHOH1473
AHOH1534

site_idAC5
Number of Residues22
DetailsBINDING SITE FOR RESIDUE FMN B 2312
ChainResidue
BALA18
BSER19
BGLY20
BLYS43
BSER44
BTYR58
BASN67
BMET69
BASN127
BLYS164
BVAL192
BASN193
BGLY221
BTHR248
BGLY249
BGLY250
BGLY271
BTHR272
BORO2313
BHOH2316
BHOH2320
BHOH2325

site_idAC6
Number of Residues10
DetailsBINDING SITE FOR RESIDUE ORO B 2313
ChainResidue
BLYS43
BASN67
BMET69
BGLY70
BLEU71
BASN127
BASN193
BSER194
BACY1002
BFMN2312

site_idAC7
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ACY A 1001
ChainResidue
AGLU213
APHE216
AHOH1410
BARG238

site_idAC8
Number of Residues7
DetailsBINDING SITE FOR RESIDUE ACY B 1002
ChainResidue
BSER129
BASN193
BSER194
BGLY218
BORO2313
BHOH2380
BHOH2396

site_idAC9
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ACY B 1003
ChainResidue
AARG238
BGLU213
BPHE216
BHOH2402

site_idBC1
Number of Residues7
DetailsBINDING SITE FOR RESIDUE ACY A 1004
ChainResidue
AHOH1389
ASER129
AASN193
ASER194
AGLY196
AGLY218
AORO1313

Functional Information from PROSITE/UniProt
site_idPS00911
Number of Residues20
DetailsDHODEHASE_1 Dihydroorotate dehydrogenase signature 1. GayitKSSTlekReGNplPR
ChainResidueDetails
AGLY38-ARG57

site_idPS00912
Number of Residues21
DetailsDHODEHASE_2 Dihydroorotate dehydrogenase signature 2. IIGtGGIeTgqdAfeHLlCGA
ChainResidueDetails
AILE245-ALA265

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsACT_SITE: Nucleophile
ChainResidueDetails
ACYS130
BCYS130

site_idSWS_FT_FI2
Number of Residues12
DetailsBINDING: BINDING => ECO:0000269|PubMed:9032071, ECO:0000269|PubMed:9655329
ChainResidueDetails
ASER19
BGLY221
BGLY249
BGLY271
ALYS164
AVAL192
AGLY221
AGLY249
AGLY271
BSER19
BLYS164
BVAL192

site_idSWS_FT_FI3
Number of Residues8
DetailsBINDING:
ChainResidueDetails
ALYS43
AASN67
AASN127
AASN193
BLYS43
BASN67
BASN127
BASN193

Catalytic Information from CSA
site_idMCSA1
Number of Residues2
DetailsM-CSA 892
ChainResidueDetails
ALYS43electrostatic stabiliser
ACYS130proton shuttle (general acid/base)

site_idMCSA2
Number of Residues2
DetailsM-CSA 892
ChainResidueDetails
BLYS43electrostatic stabiliser
BCYS130proton shuttle (general acid/base)

218853

PDB entries from 2024-04-24

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