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1JPV

Crystal Structure of 5'-deoxy-5'-methylthioadenosine phosphorylase complexed with SO4

Functional Information from GO Data
ChainGOidnamespacecontents
A0003824molecular_functioncatalytic activity
A0004731molecular_functionpurine-nucleoside phosphorylase activity
A0004850molecular_functionuridine phosphorylase activity
A0005829cellular_componentcytosol
A0006152biological_processpurine nucleoside catabolic process
A0006218biological_processuridine catabolic process
A0009116biological_processnucleoside metabolic process
A0009164biological_processnucleoside catabolic process
A0016740molecular_functiontransferase activity
A0016757molecular_functionglycosyltransferase activity
A0016763molecular_functionpentosyltransferase activity
A0017061molecular_functionS-methyl-5-thioadenosine phosphorylase activity
B0003824molecular_functioncatalytic activity
B0004731molecular_functionpurine-nucleoside phosphorylase activity
B0004850molecular_functionuridine phosphorylase activity
B0005829cellular_componentcytosol
B0006152biological_processpurine nucleoside catabolic process
B0006218biological_processuridine catabolic process
B0009116biological_processnucleoside metabolic process
B0009164biological_processnucleoside catabolic process
B0016740molecular_functiontransferase activity
B0016757molecular_functionglycosyltransferase activity
B0016763molecular_functionpentosyltransferase activity
B0017061molecular_functionS-methyl-5-thioadenosine phosphorylase activity
C0003824molecular_functioncatalytic activity
C0004731molecular_functionpurine-nucleoside phosphorylase activity
C0004850molecular_functionuridine phosphorylase activity
C0005829cellular_componentcytosol
C0006152biological_processpurine nucleoside catabolic process
C0006218biological_processuridine catabolic process
C0009116biological_processnucleoside metabolic process
C0009164biological_processnucleoside catabolic process
C0016740molecular_functiontransferase activity
C0016757molecular_functionglycosyltransferase activity
C0016763molecular_functionpentosyltransferase activity
C0017061molecular_functionS-methyl-5-thioadenosine phosphorylase activity
Functional Information from PDB Data
site_idAC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE SO4 A 1250
ChainResidue
AGLY21
AARG43
AARG86
AGLY88
ATHR89
AHOH535

site_idAC2
Number of Residues8
DetailsBINDING SITE FOR RESIDUE SO4 B 2250
ChainResidue
BGLY88
BTHR89
BHOH510
BHOH523
CARG43
BGLY21
BARG86
BTYR87

site_idAC3
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 C 3250
ChainResidue
BARG43
CGLY21
CARG86
CGLY88
CTHR89

Functional Information from PROSITE/UniProt
site_idPS01232
Number of Residues16
DetailsPNP_UDP_1 Purine and other phosphorylases family 1 signature. ThGIGgPSiAIvleEL
ChainResidueDetails
ATHR61-LEU76

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues3
DetailsBINDING: BINDING => ECO:0000269|PubMed:11489901
ChainResidueDetails
AHIS5
BHIS5
CHIS5

site_idSWS_FT_FI2
Number of Residues9
DetailsBINDING: in other chain => ECO:0000269|PubMed:11489901, ECO:0007744|PDB:1JDS, ECO:0007744|PDB:1JE0
ChainResidueDetails
AGLY21
AARG25
AARG86
BGLY21
BARG25
BARG86
CGLY21
CARG25
CARG86

site_idSWS_FT_FI3
Number of Residues3
DetailsBINDING: BINDING => ECO:0000269|PubMed:11489901, ECO:0007744|PDB:1JE0
ChainResidueDetails
AARG43
BARG43
CARG43

site_idSWS_FT_FI4
Number of Residues6
DetailsBINDING: in other chain => ECO:0000269|PubMed:11489901
ChainResidueDetails
AGLU163
ASER204
BGLU163
BSER204
CGLU163
CSER204

site_idSWS_FT_FI5
Number of Residues3
DetailsBINDING: in other chain => ECO:0000269|PubMed:11489901, ECO:0007744|PDB:1JDT, ECO:0007744|PDB:1JE1
ChainResidueDetails
AGLU180
BGLU180
CGLU180

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PDB entries from 2024-04-24

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