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1JN9

Structure of Putative Asparaginase Encoded by Escherichia coli ybiK Gene

Functional Information from GO Data
ChainGOidnamespacecontents
A0016787molecular_functionhydrolase activity
B0016787molecular_functionhydrolase activity
C0016787molecular_functionhydrolase activity
D0016787molecular_functionhydrolase activity
Functional Information from PDB Data
site_idAC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE NA A 401
ChainResidue
ALEU60
AGLU61
ACME63
APHE66
AALA68
AILE70

site_idAC2
Number of Residues3
DetailsBINDING SITE FOR RESIDUE CL A 403
ChainResidue
AGLN23
DILE310
DTYR311

site_idAC3
Number of Residues7
DetailsBINDING SITE FOR RESIDUE CA A 407
ChainResidue
AMET114
ASER117
AHOH413
AHOH414
AHOH415
AHOH416
AHOH487

site_idAC4
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CA A 408
ChainResidue
AASP51
AHOH467
AHOH468
AHOH469
AHOH470
CGLU125

site_idAC5
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CA B 409
ChainResidue
BASP304
BHOH453
BHOH454
DASP188

site_idAC6
Number of Residues6
DetailsBINDING SITE FOR RESIDUE NA C 402
ChainResidue
CLEU60
CGLU61
CCME63
CPHE66
CALA68
CILE70

site_idAC7
Number of Residues3
DetailsBINDING SITE FOR RESIDUE CL C 405
ChainResidue
BILE310
BTYR311
CLEU22

site_idAC8
Number of Residues3
DetailsBINDING SITE FOR RESIDUE CL D 404
ChainResidue
CALA14
DTHR292
DGLU293

site_idAC9
Number of Residues2
DetailsBINDING SITE FOR RESIDUE CL D 406
ChainResidue
DARG262
DLYS267

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsACT_SITE: Nucleophile => ECO:0000305|PubMed:18323626
ChainResidueDetails
BTHR179
DTHR179

site_idSWS_FT_FI2
Number of Residues4
DetailsBINDING: BINDING => ECO:0000269|PubMed:15946951, ECO:0007744|PDB:2ZAL
ChainResidueDetails
BARG207
BTHR230
DARG207
DTHR230

Catalytic Information from CSA
site_idCSA1
Number of Residues5
DetailsAnnotated By Reference To The Literature 1apy
ChainResidueDetails
AASN67
BTHR179
BGLY231
BTHR197
BTHR230

site_idCSA2
Number of Residues5
DetailsAnnotated By Reference To The Literature 1apy
ChainResidueDetails
CASN67
DTHR179
DGLY231
DTHR197
DTHR230

site_idCSA3
Number of Residues1
DetailsAnnotated By Reference To The Literature 1apy
ChainResidueDetails
AGLY69

site_idCSA4
Number of Residues1
DetailsAnnotated By Reference To The Literature 1apy
ChainResidueDetails
CGLY69

229380

PDB entries from 2024-12-25

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