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1JL2

Crystal structure of TCEO RNase H-a chimera combining the folding core from T. thermophilus RNase H and the remaining region of E. coli RNase H

Functional Information from GO Data
ChainGOidnamespacecontents
A0003676molecular_functionnucleic acid binding
A0004523molecular_functionRNA-DNA hybrid ribonuclease activity
B0003676molecular_functionnucleic acid binding
B0004523molecular_functionRNA-DNA hybrid ribonuclease activity
C0003676molecular_functionnucleic acid binding
C0004523molecular_functionRNA-DNA hybrid ribonuclease activity
D0003676molecular_functionnucleic acid binding
D0004523molecular_functionRNA-DNA hybrid ribonuclease activity
Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues8
DetailsBINDING: BINDING => ECO:0000269|PubMed:1311386
ChainResidueDetails
AASP10
AASP135
BASP10
BASP135
CASP10
CASP135
DASP10
DASP135

site_idSWS_FT_FI2
Number of Residues8
DetailsBINDING: BINDING => ECO:0000250
ChainResidueDetails
AGLU48
BGLU48
CGLU48
DGLU48
AASP70
BASP70
CASP70
DASP70

Catalytic Information from CSA
site_idMCSA1
Number of Residues5
DetailsM-CSA 163
ChainResidueDetails
AASP10metal ligand
AGLY11metal ligand
AGLU48increase acidity, increase basicity, unknown
AHIS125hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor, unknown
AASP135increase acidity, metal ligand, proton acceptor, proton donor

site_idMCSA2
Number of Residues5
DetailsM-CSA 163
ChainResidueDetails
BASP10metal ligand
BGLY11metal ligand
BGLU48increase acidity, increase basicity, unknown
BHIS125hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor, unknown
BASP135increase acidity, metal ligand, proton acceptor, proton donor

site_idMCSA3
Number of Residues5
DetailsM-CSA 163
ChainResidueDetails
CASP10metal ligand
CGLY11metal ligand
CGLU48increase acidity, increase basicity, unknown
CHIS125hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor, unknown
CASP135increase acidity, metal ligand, proton acceptor, proton donor

site_idMCSA4
Number of Residues5
DetailsM-CSA 163
ChainResidueDetails
DASP10metal ligand
DGLY11metal ligand
DGLU48increase acidity, increase basicity, unknown
DHIS125hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor, unknown
DASP135increase acidity, metal ligand, proton acceptor, proton donor

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PDB entries from 2024-11-06

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