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1JKI

myo-Inositol-1-phosphate Synthase Complexed with an Inhibitor, 2-deoxy-glucitol-6-phosphate

Functional Information from GO Data
ChainGOidnamespacecontents
A0004512molecular_functioninositol-3-phosphate synthase activity
A0005737cellular_componentcytoplasm
A0006021biological_processinositol biosynthetic process
A0008654biological_processphospholipid biosynthetic process
A0016853molecular_functionisomerase activity
B0004512molecular_functioninositol-3-phosphate synthase activity
B0005737cellular_componentcytoplasm
B0006021biological_processinositol biosynthetic process
B0008654biological_processphospholipid biosynthetic process
B0016853molecular_functionisomerase activity
Functional Information from PDB Data
site_idAC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE NH4 A 670
ChainResidue
ALEU352
AASN354
AASP438
ADG6630
ANAI650

site_idAC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE NH4 B 680
ChainResidue
BNAI660
BLEU352
BASN354
BASP438
BDG6640

site_idAC3
Number of Residues13
DetailsBINDING SITE FOR RESIDUE DG6 A 630
ChainResidue
AASP320
ASER323
AGLN325
AASN350
AASP356
AGLY357
ALEU360
ALYS369
AILE402
ALYS412
ALYS489
ANAI650
ANH4670

site_idAC4
Number of Residues16
DetailsBINDING SITE FOR RESIDUE DG6 B 640
ChainResidue
BSER323
BGLN325
BTHR326
BLEU352
BASN354
BASP356
BGLY357
BLEU360
BLYS369
BILE402
BLYS412
BLYS489
BNAI660
BNH4680
BHOH986
BHOH995

site_idAC5
Number of Residues31
DetailsBINDING SITE FOR RESIDUE NAI A 650
ChainResidue
AGLY72
AGLY74
AGLY75
AASN76
AASN77
AASP148
AILE149
ASER184
AILE185
AARG198
ATHR244
AALA245
AASN246
ATHR247
AGLY295
ASER296
ALEU321
AASN355
AASP356
ALYS369
AASP410
AASP438
ASER439
AALA442
ADG6630
ANH4670
AHOH674
AHOH777
AHOH784
AHOH892
AHOH893

site_idAC6
Number of Residues28
DetailsBINDING SITE FOR RESIDUE NAI B 660
ChainResidue
BGLY72
BGLY75
BASN76
BASN77
BASP148
BILE149
BSER184
BILE185
BARG198
BTHR244
BALA245
BASN246
BTHR247
BGLY295
BSER296
BASN355
BASP356
BLYS369
BASP410
BASP438
BSER439
BDG6640
BNH4680
BHOH754
BHOH755
BHOH915
BHOH969
BHOH986

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsBINDING: BINDING => ECO:0000269|PubMed:11779862, ECO:0000269|PubMed:12836703, ECO:0007744|PDB:1JKF, ECO:0007744|PDB:1LA2
ChainResidueDetails
AGLN52
BGLN52

site_idSWS_FT_FI2
Number of Residues2
DetailsBINDING: BINDING => ECO:0000269|PubMed:11779862, ECO:0000269|PubMed:12832758, ECO:0000269|PubMed:12836703, ECO:0000269|PubMed:14684747, ECO:0007744|PDB:1JKF, ECO:0007744|PDB:1LA2, ECO:0007744|PDB:1P1H, ECO:0007744|PDB:1P1I, ECO:0007744|PDB:1P1J, ECO:0007744|PDB:1RM0
ChainResidueDetails
AASP53
BASP53

site_idSWS_FT_FI3
Number of Residues10
DetailsBINDING: BINDING => ECO:0000269|PubMed:11779862, ECO:0000269|PubMed:12832758, ECO:0000269|PubMed:12836703, ECO:0000269|PubMed:14684747, ECO:0007744|PDB:1JKF, ECO:0007744|PDB:1JKI, ECO:0007744|PDB:1LA2, ECO:0007744|PDB:1P1H, ECO:0007744|PDB:1P1I, ECO:0007744|PDB:1P1J, ECO:0007744|PDB:1P1K, ECO:0007744|PDB:1RM0
ChainResidueDetails
ATYR54
BARG225
AVAL55
AVAL126
AILE223
AARG225
BTYR54
BVAL55
BVAL126
BILE223

site_idSWS_FT_FI4
Number of Residues2
DetailsBINDING: BINDING => ECO:0000269|PubMed:11779862, ECO:0000269|PubMed:12832758, ECO:0000269|PubMed:14684747, ECO:0007744|PDB:1JKF, ECO:0007744|PDB:1JKI, ECO:0007744|PDB:1LA2, ECO:0007744|PDB:1P1H, ECO:0007744|PDB:1P1I, ECO:0007744|PDB:1P1J, ECO:0007744|PDB:1P1K, ECO:0007744|PDB:1RM0
ChainResidueDetails
AGLN162
BGLN162

site_idSWS_FT_FI5
Number of Residues4
DetailsBINDING: BINDING => ECO:0000269|PubMed:12832758, ECO:0000269|PubMed:12836703, ECO:0000269|PubMed:14684747, ECO:0007744|PDB:1JKI, ECO:0007744|PDB:1LA2, ECO:0007744|PDB:1P1H, ECO:0007744|PDB:1P1I, ECO:0007744|PDB:1P1J, ECO:0007744|PDB:1P1K, ECO:0007744|PDB:1RM0
ChainResidueDetails
AVAL163
AMET176
BVAL163
BMET176

site_idSWS_FT_FI6
Number of Residues8
DetailsBINDING: BINDING => ECO:0000269|PubMed:11779862, ECO:0007744|PDB:1JKF
ChainResidueDetails
ALYS173
AALA174
AASN299
ALEU387
BLYS173
BALA174
BASN299
BLEU387

site_idSWS_FT_FI7
Number of Residues2
DetailsBINDING: BINDING => ECO:0000269|PubMed:12836703, ECO:0007744|PDB:1LA2
ChainResidueDetails
AARG222
BARG222

site_idSWS_FT_FI8
Number of Residues2
DetailsBINDING: BINDING => ECO:0000269|PubMed:11779862, ECO:0000269|PubMed:12832758, ECO:0000269|PubMed:14684747, ECO:0007744|PDB:1JKF, ECO:0007744|PDB:1JKI, ECO:0007744|PDB:1P1H, ECO:0007744|PDB:1P1I, ECO:0007744|PDB:1P1K, ECO:0007744|PDB:1RM0
ChainResidueDetails
AARG224
BARG224

site_idSWS_FT_FI9
Number of Residues2
DetailsBINDING: BINDING => ECO:0000269|PubMed:11779862, ECO:0000269|PubMed:12832758, ECO:0007744|PDB:1JKI, ECO:0007744|PDB:1P1H
ChainResidueDetails
AGLU273
BGLU273

site_idSWS_FT_FI10
Number of Residues4
DetailsBINDING: BINDING => ECO:0000269|PubMed:11779862, ECO:0000269|PubMed:12832758, ECO:0000269|PubMed:12836703, ECO:0000269|PubMed:14684747, ECO:0007744|PDB:1JKI, ECO:0007744|PDB:1LA2, ECO:0007744|PDB:1P1H, ECO:0007744|PDB:1P1I, ECO:0007744|PDB:1P1J, ECO:0007744|PDB:1P1K, ECO:0007744|PDB:1RM0
ChainResidueDetails
AGLU274
AALA333
BGLU274
BALA333

site_idSWS_FT_FI11
Number of Residues2
DetailsBINDING: BINDING => ECO:0000269|PubMed:11779862, ECO:0000269|PubMed:12832758, ECO:0007744|PDB:1JKF, ECO:0007744|PDB:1P1H
ChainResidueDetails
AGLN298
BGLN298

site_idSWS_FT_FI12
Number of Residues2
DetailsBINDING: BINDING => ECO:0000269|PubMed:11779862, ECO:0000269|PubMed:12832758, ECO:0007744|PDB:1JKF, ECO:0007744|PDB:1P1J
ChainResidueDetails
APHE301
BPHE301

site_idSWS_FT_FI13
Number of Residues2
DetailsBINDING: BINDING => ECO:0000269|PubMed:12832758, ECO:0000269|PubMed:12836703, ECO:0007744|PDB:1LA2, ECO:0007744|PDB:1P1H
ChainResidueDetails
ALEU332
BLEU332

site_idSWS_FT_FI14
Number of Residues2
DetailsBINDING: BINDING => ECO:0000269|PubMed:11779862, ECO:0000269|PubMed:12832758, ECO:0000269|PubMed:12836703, ECO:0000269|PubMed:14684747, ECO:0007744|PDB:1JKI, ECO:0007744|PDB:1LA2, ECO:0007744|PDB:1P1H, ECO:0007744|PDB:1P1J, ECO:0007744|PDB:1P1K, ECO:0007744|PDB:1RM0
ChainResidueDetails
AGLN334
BGLN334

site_idSWS_FT_FI15
Number of Residues2
DetailsBINDING: BINDING => ECO:0000269|PubMed:12832758, ECO:0000269|PubMed:14684747, ECO:0007744|PDB:1P1H, ECO:0007744|PDB:1P1J, ECO:0007744|PDB:1P1K, ECO:0007744|PDB:1RM0
ChainResidueDetails
AALA347
BALA347

site_idSWS_FT_FI16
Number of Residues2
DetailsBINDING: BINDING => ECO:0000269|PubMed:11779862, ECO:0007744|PDB:1JKI
ChainResidueDetails
ATYR388
BTYR388

site_idSWS_FT_FI17
Number of Residues2
DetailsBINDING: BINDING => ECO:0000269|PubMed:12832758, ECO:0000269|PubMed:12836703, ECO:0000269|PubMed:14684747, ECO:0007744|PDB:1LA2, ECO:0007744|PDB:1P1H, ECO:0007744|PDB:1P1J, ECO:0007744|PDB:1P1K, ECO:0007744|PDB:1RM0
ChainResidueDetails
AASP416
BASP416

site_idSWS_FT_FI18
Number of Residues2
DetailsBINDING: BINDING => ECO:0000269|PubMed:11779862, ECO:0000269|PubMed:12832758, ECO:0007744|PDB:1JKI, ECO:0007744|PDB:1P1H, ECO:0007744|PDB:1P1K
ChainResidueDetails
AGLU417
BGLU417

site_idSWS_FT_FI19
Number of Residues2
DetailsMOD_RES: Phosphothreonine => ECO:0000269|PubMed:23902760
ChainResidueDetails
ALEU26
BLEU26

site_idSWS_FT_FI20
Number of Residues6
DetailsMOD_RES: Phosphoserine => ECO:0000269|PubMed:23902760
ChainResidueDetails
ATYR155
AGLN162
AGLU274
BTYR155
BGLN162
BGLU274

site_idSWS_FT_FI21
Number of Residues2
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:19779198
ChainResidueDetails
AILE346
BILE346

site_idSWS_FT_FI22
Number of Residues2
DetailsMOD_RES: Phosphoserine => ECO:0000305|PubMed:23902760
ChainResidueDetails
ALEU352
BLEU352

Catalytic Information from CSA
site_idMCSA1
Number of Residues4
DetailsM-CSA 331
ChainResidueDetails
AGLN298electrostatic stabiliser, hydrogen bond acceptor
AALA347activator, electrostatic stabiliser, hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor
AASP390activator, electrostatic stabiliser, hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor
AVAL467electrostatic stabiliser, hydrogen bond donor, proton acceptor, proton donor

site_idMCSA2
Number of Residues4
DetailsM-CSA 331
ChainResidueDetails
BGLN298electrostatic stabiliser, hydrogen bond acceptor
BALA347activator, electrostatic stabiliser, hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor
BASP390activator, electrostatic stabiliser, hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor
BVAL467electrostatic stabiliser, hydrogen bond donor, proton acceptor, proton donor

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PDB entries from 2024-07-10

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