Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1JGJ

CRYSTAL STRUCTURE OF SENSORY RHODOPSIN II AT 2.4 ANGSTROMS: INSIGHTS INTO COLOR TUNING AND TRANSDUCER INTERACTION

Functional Information from GO Data
ChainGOidnamespacecontents
A0005216molecular_functionmonoatomic ion channel activity
A0005515molecular_functionprotein binding
A0005886cellular_componentplasma membrane
A0006811biological_processmonoatomic ion transport
A0007602biological_processphototransduction
A0009881molecular_functionphotoreceptor activity
A0016020cellular_componentmembrane
A0034220biological_processmonoatomic ion transmembrane transport
A0050896biological_processresponse to stimulus
Functional Information from PROSITE/UniProt
site_idPS00327
Number of Residues12
DetailsBACTERIAL_OPSIN_RET Bacterial rhodopsins retinal binding site. IVYLDLvTKvGF
ChainResidueDetails
AILE197-PHE208

site_idPS00950
Number of Residues13
DetailsBACTERIAL_OPSIN_1 Bacterial rhodopsins signature 1. RYiDWiLTTPLIV
ChainResidueDetails
AARG72-VAL84

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues25
DetailsTOPO_DOM: Extracellular
ChainResidueDetails
AMET1-GLY3
ALEU56-PHE69
AVAL118-ILE121
APRO182-THR189

site_idSWS_FT_FI2
Number of Residues21
DetailsTRANSMEM: Helical; Name=Helix A
ChainResidueDetails
ALEU4-ALA25

site_idSWS_FT_FI3
Number of Residues12
DetailsTOPO_DOM: Cytoplasmic
ChainResidueDetails
AGLY26-GLU33
AGLY92-ASP94
ASER150-SER153

site_idSWS_FT_FI4
Number of Residues21
DetailsTRANSMEM: Helical; Name=Helix B
ChainResidueDetails
AARG34-ALA55

site_idSWS_FT_FI5
Number of Residues21
DetailsTRANSMEM: Helical; Name=Helix C
ChainResidueDetails
AVAL70-ALA91

site_idSWS_FT_FI6
Number of Residues22
DetailsTRANSMEM: Helical; Name=Helix D
ChainResidueDetails
ASER95-MET117

site_idSWS_FT_FI7
Number of Residues27
DetailsTRANSMEM: Helical; Name=Helix E
ChainResidueDetails
AGLU122-ALA149

site_idSWS_FT_FI8
Number of Residues27
DetailsTRANSMEM: Helical; Name=Helix F
ChainResidueDetails
ASER154-GLY181

site_idSWS_FT_FI9
Number of Residues1
DetailsMOD_RES: N6-(retinylidene)lysine
ChainResidueDetails
ALYS205

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon