1JDT
CRYSTAL STRUCTURE OF 5'-DEOXY-5'-METHYLTHIOADENOSINE PHOSPHORYLASE COMPLEXED WITH MTA AND SULFATE ION
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0003824 | molecular_function | catalytic activity |
A | 0005829 | cellular_component | cytosol |
A | 0009116 | biological_process | nucleoside metabolic process |
A | 0009164 | biological_process | nucleoside catabolic process |
A | 0016757 | molecular_function | glycosyltransferase activity |
A | 0016763 | molecular_function | pentosyltransferase activity |
A | 0017061 | molecular_function | S-methyl-5-thioadenosine phosphorylase activity |
B | 0003824 | molecular_function | catalytic activity |
B | 0005829 | cellular_component | cytosol |
B | 0009116 | biological_process | nucleoside metabolic process |
B | 0009164 | biological_process | nucleoside catabolic process |
B | 0016757 | molecular_function | glycosyltransferase activity |
B | 0016763 | molecular_function | pentosyltransferase activity |
B | 0017061 | molecular_function | S-methyl-5-thioadenosine phosphorylase activity |
C | 0003824 | molecular_function | catalytic activity |
C | 0005829 | cellular_component | cytosol |
C | 0009116 | biological_process | nucleoside metabolic process |
C | 0009164 | biological_process | nucleoside catabolic process |
C | 0016757 | molecular_function | glycosyltransferase activity |
C | 0016763 | molecular_function | pentosyltransferase activity |
C | 0017061 | molecular_function | S-methyl-5-thioadenosine phosphorylase activity |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE SO4 A 1250 |
Chain | Residue |
A | GLY21 |
A | ARG25 |
A | ARG43 |
A | ARG86 |
A | GLY88 |
A | THR89 |
A | GLU182 |
A | MTA1260 |
site_id | AC2 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE SO4 B 2250 |
Chain | Residue |
B | ARG25 |
B | ARG86 |
B | GLY88 |
B | THR89 |
B | MTA2260 |
C | ARG43 |
B | GLY21 |
site_id | AC3 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE SO4 C 3250 |
Chain | Residue |
B | ARG43 |
C | GLY21 |
C | ARG25 |
C | ARG86 |
C | GLY88 |
C | THR89 |
C | MTA3260 |
site_id | AC4 |
Number of Residues | 13 |
Details | BINDING SITE FOR RESIDUE MTA A 1260 |
Chain | Residue |
A | HIS5 |
A | ARG43 |
A | THR89 |
A | THR90 |
A | GLY91 |
A | PHE160 |
A | GLU163 |
A | VAL179 |
A | GLU180 |
A | MET181 |
A | GLU182 |
A | ASP205 |
A | SO41250 |
site_id | AC5 |
Number of Residues | 15 |
Details | BINDING SITE FOR RESIDUE MTA B 2260 |
Chain | Residue |
B | ARG86 |
B | THR89 |
B | THR90 |
B | GLY91 |
B | PHE160 |
B | GLU163 |
B | VAL179 |
B | GLU180 |
B | MET181 |
B | GLU182 |
B | SER204 |
B | ASP205 |
B | SO42250 |
C | HIS5 |
C | ARG43 |
site_id | AC6 |
Number of Residues | 17 |
Details | BINDING SITE FOR RESIDUE MTA C 3260 |
Chain | Residue |
B | HIS5 |
B | ARG43 |
C | ILE64 |
C | ARG86 |
C | THR89 |
C | THR90 |
C | GLY91 |
C | PHE160 |
C | GLU163 |
C | VAL179 |
C | GLU180 |
C | MET181 |
C | GLU182 |
C | SER204 |
C | ASP205 |
C | LEU207 |
C | SO43250 |
Functional Information from PROSITE/UniProt
site_id | PS01232 |
Number of Residues | 16 |
Details | PNP_UDP_1 Purine and other phosphorylases family 1 signature. ThGIGgPSiAIvleEL |
Chain | Residue | Details |
A | THR61-LEU76 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 3 |
Details | BINDING: BINDING => ECO:0000269|PubMed:11489901 |
Chain | Residue | Details |
A | HIS5 | |
B | HIS5 | |
C | HIS5 |
site_id | SWS_FT_FI2 |
Number of Residues | 9 |
Details | BINDING: in other chain => ECO:0000269|PubMed:11489901, ECO:0007744|PDB:1JDS, ECO:0007744|PDB:1JE0 |
Chain | Residue | Details |
A | GLY21 | |
A | ARG25 | |
A | ARG86 | |
B | GLY21 | |
B | ARG25 | |
B | ARG86 | |
C | GLY21 | |
C | ARG25 | |
C | ARG86 |
site_id | SWS_FT_FI3 |
Number of Residues | 3 |
Details | BINDING: BINDING => ECO:0000269|PubMed:11489901, ECO:0007744|PDB:1JE0 |
Chain | Residue | Details |
A | ARG43 | |
B | ARG43 | |
C | ARG43 |
site_id | SWS_FT_FI4 |
Number of Residues | 6 |
Details | BINDING: in other chain => ECO:0000269|PubMed:11489901 |
Chain | Residue | Details |
A | GLU163 | |
A | SER204 | |
B | GLU163 | |
B | SER204 | |
C | GLU163 | |
C | SER204 |
site_id | SWS_FT_FI5 |
Number of Residues | 3 |
Details | BINDING: in other chain => ECO:0000269|PubMed:11489901, ECO:0007744|PDB:1JDT, ECO:0007744|PDB:1JE1 |
Chain | Residue | Details |
A | GLU180 | |
B | GLU180 | |
C | GLU180 |
Catalytic Information from CSA
site_id | CSA1 |
Number of Residues | 2 |
Details | Annotated By Reference To The Literature 1cg6 |
Chain | Residue | Details |
A | LEU207 | |
A | ASP205 |
site_id | CSA2 |
Number of Residues | 2 |
Details | Annotated By Reference To The Literature 1cg6 |
Chain | Residue | Details |
B | LEU207 | |
B | ASP205 |
site_id | CSA3 |
Number of Residues | 2 |
Details | Annotated By Reference To The Literature 1cg6 |
Chain | Residue | Details |
C | LEU207 | |
C | ASP205 |