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1JCY

Aquifex aeolicus KDO8P synthase in complex with R5P, PEP and Cadmium

Functional Information from GO Data
ChainGOidnamespacecontents
A0005737cellular_componentcytoplasm
A0005829cellular_componentcytosol
A0008676molecular_function3-deoxy-8-phosphooctulonate synthase activity
A0009058biological_processbiosynthetic process
A0009103biological_processlipopolysaccharide biosynthetic process
A0016740molecular_functiontransferase activity
A0019294biological_processketo-3-deoxy-D-manno-octulosonic acid biosynthetic process
A0046364biological_processmonosaccharide biosynthetic process
B0005737cellular_componentcytoplasm
B0005829cellular_componentcytosol
B0008676molecular_function3-deoxy-8-phosphooctulonate synthase activity
B0009058biological_processbiosynthetic process
B0009103biological_processlipopolysaccharide biosynthetic process
B0016740molecular_functiontransferase activity
B0019294biological_processketo-3-deoxy-D-manno-octulosonic acid biosynthetic process
B0046364biological_processmonosaccharide biosynthetic process
Functional Information from PDB Data
site_idAC1
Number of Residues10
DetailsBINDING SITE FOR RESIDUE R5P A 1269
ChainResidue
AASN1048
BARG2106
AARG1049
ASER1050
AARG1154
AHIS1185
AGLN1188
ASER1197
APEP1268
AHOH3204

site_idAC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CD A 1270
ChainResidue
ACYS1011
AHIS1185
AGLU1222
AASP1233

site_idAC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CD B 2270
ChainResidue
BCYS2011
BLYS2046
BHIS2185
BGLU2222
BASP2233
BPEP2268

site_idAC4
Number of Residues4
DetailsBINDING SITE FOR RESIDUE PO4 B 2269
ChainResidue
AARG1106
BARG2049
BSER2050
BHOH3203

site_idAC5
Number of Residues14
DetailsBINDING SITE FOR RESIDUE PEP A 1268
ChainResidue
ALYS1041
ASER1043
ALYS1046
AASP1081
AGLN1099
APRO1101
AALA1102
ALYS1124
AARG1154
AHIS1185
APHE1220
AR5P1269
AHOH3017
AHOH3021

site_idAC6
Number of Residues14
DetailsBINDING SITE FOR RESIDUE PEP B 2268
ChainResidue
BLYS2041
BSER2043
BLYS2046
BGLN2099
BPRO2101
BALA2102
BLYS2124
BARG2154
BPHE2220
BCD2270
BHOH3031
BHOH3070
BHOH3090
BHOH3205

Catalytic Information from CSA
site_idCSA1
Number of Residues1
DetailsAnnotated By Reference To The Literature 1q3n
ChainResidueDetails
AHIS1185

site_idCSA2
Number of Residues1
DetailsAnnotated By Reference To The Literature 1q3n
ChainResidueDetails
BHIS2185

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PDB entries from 2024-07-17

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