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1J9T

Crystal structure of nitrite soaked reduced H255N AFNIR

Functional Information from GO Data
ChainGOidnamespacecontents
A0005507molecular_functioncopper ion binding
A0016491molecular_functionoxidoreductase activity
A0019333biological_processdenitrification pathway
A0042128biological_processnitrate assimilation
A0042597cellular_componentperiplasmic space
A0046872molecular_functionmetal ion binding
A0050421molecular_functionnitrite reductase (NO-forming) activity
B0005507molecular_functioncopper ion binding
B0016491molecular_functionoxidoreductase activity
B0019333biological_processdenitrification pathway
B0042128biological_processnitrate assimilation
B0042597cellular_componentperiplasmic space
B0046872molecular_functionmetal ion binding
B0050421molecular_functionnitrite reductase (NO-forming) activity
C0005507molecular_functioncopper ion binding
C0016491molecular_functionoxidoreductase activity
C0019333biological_processdenitrification pathway
C0042128biological_processnitrate assimilation
C0042597cellular_componentperiplasmic space
C0046872molecular_functionmetal ion binding
C0050421molecular_functionnitrite reductase (NO-forming) activity
Functional Information from PDB Data
site_idAC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CU A 600
ChainResidue
AMET94
AHIS95
ACYS136
APRO138
AHIS145
ACU601

site_idAC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE CU A 601
ChainResidue
ACU600
AHOH5482
AHIS95
ACYS136
AMET150

site_idAC3
Number of Residues7
DetailsBINDING SITE FOR RESIDUE CU A 602
ChainResidue
AASP98
AHIS100
AHIS135
BILE257
BHIS306
BNO2604
BHOH6000

site_idAC4
Number of Residues10
DetailsBINDING SITE FOR RESIDUE NO2 B 604
ChainResidue
AASP98
AHIS135
AALA137
ACU602
BILE257
BHIS306
BLEU308
BHOH5324
BHOH6000
BHOH6003

site_idAC5
Number of Residues5
DetailsBINDING SITE FOR RESIDUE CU B 700
ChainResidue
BCYS136
BPRO138
BHIS145
BCU701
BHOH5483

site_idAC6
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CU B 701
ChainResidue
BHIS95
BCYS136
BMET150
BCU700

site_idAC7
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CU B 702
ChainResidue
BHIS100
BHIS135
BNO2704
BHOH7000
CILE257
CHIS306

site_idAC8
Number of Residues9
DetailsBINDING SITE FOR RESIDUE NO2 B 704
ChainResidue
BASP98
BHIS135
BALA137
BCU702
BHOH5394
BHOH7000
BHOH7003
CILE257
CHIS306

site_idAC9
Number of Residues5
DetailsBINDING SITE FOR RESIDUE CU C 800
ChainResidue
CCYS136
CPRO138
CHIS145
CCU801
CHOH5481

site_idBC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CU C 801
ChainResidue
CHIS95
CCYS136
CHIS145
CMET150
CCU800
CHOH5481

site_idBC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CU C 802
ChainResidue
AILE257
AHIS306
CHIS100
CHIS135
CHOH803
CNO2804

site_idBC3
Number of Residues8
DetailsBINDING SITE FOR RESIDUE NO2 C 804
ChainResidue
AILE257
AHIS306
CASP98
CHIS135
CALA137
CCU802
CHOH803
CHOH8002

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues3
DetailsBinding site: {"description":"type 1 copper site","evidences":[{"source":"PubMed","id":"8172899","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues6
DetailsBinding site: {"description":"type 2 copper site"}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues9
DetailsBinding site: {"description":"type 1 copper site"}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues3
DetailsBinding site: {"description":"type 2 copper site","evidences":[{"source":"PubMed","id":"8172899","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

Catalytic Information from CSA
site_idCSA1
Number of Residues2
DetailsAnnotated By Reference To The Literature 1nid
ChainResidueDetails
APHE64
AGLY66

site_idCSA2
Number of Residues2
DetailsAnnotated By Reference To The Literature 1nid
ChainResidueDetails
BPHE64
BGLY66

site_idCSA3
Number of Residues2
DetailsAnnotated By Reference To The Literature 1nid
ChainResidueDetails
CPHE64
CGLY66

site_idCSA4
Number of Residues2
DetailsAnnotated By Reference To The Literature 1nid
ChainResidueDetails
AASP98
AASN255

site_idCSA5
Number of Residues2
DetailsAnnotated By Reference To The Literature 1nid
ChainResidueDetails
BASP98
BASN255

site_idCSA6
Number of Residues2
DetailsAnnotated By Reference To The Literature 1nid
ChainResidueDetails
CASP98
CASN255

245663

PDB entries from 2025-12-03

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