Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1J1U

Crystal structure of archaeal tyrosyl-tRNA synthetase complexed with tRNA(Tyr) and L-tyrosine

Functional Information from GO Data
ChainGOidnamespacecontents
A0000166molecular_functionnucleotide binding
A0004812molecular_functionaminoacyl-tRNA ligase activity
A0004831molecular_functiontyrosine-tRNA ligase activity
A0005524molecular_functionATP binding
A0005737cellular_componentcytoplasm
A0006412biological_processtranslation
A0006418biological_processtRNA aminoacylation for protein translation
A0006437biological_processtyrosyl-tRNA aminoacylation
Functional Information from PDB Data
site_idAC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MG B 1501
ChainResidue
BHOH60
BHOH350
BA509
BG510
BU548

site_idAC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 1502
ChainResidue
BHOH291
BHOH292
BHOH61
BHOH288
BHOH289
BHOH290

site_idAC3
Number of Residues3
DetailsBINDING SITE FOR RESIDUE MG A 503
ChainResidue
AHIS160
AHOH722
AHOH723

site_idAC4
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 1503
ChainResidue
BHOH18
BHOH77
BHOH278
BHOH359
BHOH360
BHOH361

site_idAC5
Number of Residues12
DetailsBINDING SITE FOR RESIDUE TYR A 401
ChainResidue
ATYR32
AGLY34
AGLU36
ALEU65
AALA67
AHIS70
ATYR151
AGLN155
AASP158
AGLN173
AHOH599
AHOH705

Functional Information from PROSITE/UniProt
site_idPS00178
Number of Residues10
DetailsAA_TRNA_LIGASE_I Aminoacyl-transfer RNA synthetases class-I signature. P..SGkIHLGHY
ChainResidueDetails
APRO37-TYR46

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues3
DetailsBINDING: BINDING => ECO:0000269|PubMed:12754495
ChainResidueDetails
ATYR32
AGLU36
AGLN173

site_idSWS_FT_FI2
Number of Residues1
DetailsBINDING: BINDING => ECO:0000255
ChainResidueDetails
ASER207

site_idSWS_FT_FI3
Number of Residues1
DetailsSITE: Interaction with t-RNA
ChainResidueDetails
AASN143

219140

PDB entries from 2024-05-01

PDB statisticsPDBj update infoContact PDBjnumon