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1IXP

Enzyme-phosphate Complex of Pyridoxine 5'-Phosphate synthase

Functional Information from GO Data
ChainGOidnamespacecontents
A0005737cellular_componentcytoplasm
A0005829cellular_componentcytosol
A0008615biological_processpyridoxine biosynthetic process
A0016740molecular_functiontransferase activity
A0016769molecular_functiontransferase activity, transferring nitrogenous groups
A0033856molecular_functionpyridoxine 5'-phosphate synthase activity
A0042802molecular_functionidentical protein binding
B0005737cellular_componentcytoplasm
B0005829cellular_componentcytosol
B0008615biological_processpyridoxine biosynthetic process
B0016740molecular_functiontransferase activity
B0016769molecular_functiontransferase activity, transferring nitrogenous groups
B0033856molecular_functionpyridoxine 5'-phosphate synthase activity
B0042802molecular_functionidentical protein binding
C0005737cellular_componentcytoplasm
C0005829cellular_componentcytosol
C0008615biological_processpyridoxine biosynthetic process
C0016740molecular_functiontransferase activity
C0016769molecular_functiontransferase activity, transferring nitrogenous groups
C0033856molecular_functionpyridoxine 5'-phosphate synthase activity
C0042802molecular_functionidentical protein binding
D0005737cellular_componentcytoplasm
D0005829cellular_componentcytosol
D0008615biological_processpyridoxine biosynthetic process
D0016740molecular_functiontransferase activity
D0016769molecular_functiontransferase activity, transferring nitrogenous groups
D0033856molecular_functionpyridoxine 5'-phosphate synthase activity
D0042802molecular_functionidentical protein binding
Functional Information from PDB Data
site_idAC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE PO4 A 1001
ChainResidue
AASP11
AHIS12
AARG20
AHIS52
AHOH1087
AHOH1089

site_idAC2
Number of Residues9
DetailsBINDING SITE FOR RESIDUE PO4 A 1002
ChainResidue
AGLY194
AILE214
AGLY215
AHIS216
AHOH1034
AHOH1087
AARG20
AGLY192
AHIS193

site_idAC3
Number of Residues10
DetailsBINDING SITE FOR RESIDUE PO4 C 1003
ChainResidue
BARG20
CGLY192
CHIS193
CGLY194
CASN213
CILE214
CGLY215
CHIS216
CALA217
CHOH1100

site_idAC4
Number of Residues6
DetailsBINDING SITE FOR RESIDUE PO4 C 1004
ChainResidue
BARG20
CASP11
CHIS12
CHIS45
CHIS52
CHOH1100

site_idAC5
Number of Residues8
DetailsBINDING SITE FOR RESIDUE PO4 B 1005
ChainResidue
BGLY192
BHIS193
BGLY194
BILE214
BGLY215
BHIS216
BHOH1091
CARG20

site_idAC6
Number of Residues6
DetailsBINDING SITE FOR RESIDUE PO4 B 1006
ChainResidue
BASP11
BHIS12
BHIS45
BHIS52
CARG20
CHOH1065

site_idAC7
Number of Residues7
DetailsBINDING SITE FOR RESIDUE PO4 D 1007
ChainResidue
DASP11
DHIS12
DARG20
DHIS45
DHIS52
DHOH1012
DHOH1123

site_idAC8
Number of Residues11
DetailsBINDING SITE FOR RESIDUE PO4 D 1008
ChainResidue
DARG20
DGLY192
DHIS193
DGLY194
DASN213
DILE214
DGLY215
DHIS216
DALA217
DHOH1012
DHOH1114

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues8
DetailsActive site: {"description":"Proton acceptor"}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues4
DetailsActive site: {"description":"Proton donor"}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues32
DetailsBinding site: {}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues4
DetailsSite: {"description":"Transition state stabilizer"}
ChainResidueDetails

Catalytic Information from CSA
site_idMCSA1
Number of Residues9
DetailsM-CSA 243
ChainResidueDetails
AASN9electrostatic stabiliser, hydrogen bond donor
AHIS12attractive charge-charge interaction, hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor
AHIS45attractive charge-charge interaction, electrostatic stabiliser, hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor
AARG47attractive charge-charge interaction, electrostatic stabiliser, increase acidity, increase basicity
AARG51attractive charge-charge interaction, electrostatic stabiliser, hydrogen bond donor, increase acidity, increase basicity
AGLU72electrostatic stabiliser, hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor, proton relay
ATHR103electrostatic stabiliser, hydrogen bond acceptor
AGLU153electrostatic stabiliser, hydrogen bond acceptor
AHIS193electrostatic stabiliser, hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor

site_idMCSA2
Number of Residues9
DetailsM-CSA 243
ChainResidueDetails
BASN9electrostatic stabiliser, hydrogen bond donor
BHIS12attractive charge-charge interaction, hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor
BHIS45attractive charge-charge interaction, electrostatic stabiliser, hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor
BARG47attractive charge-charge interaction, electrostatic stabiliser, increase acidity, increase basicity
BARG51attractive charge-charge interaction, electrostatic stabiliser, hydrogen bond donor, increase acidity, increase basicity
BGLU72electrostatic stabiliser, hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor, proton relay
BTHR103electrostatic stabiliser, hydrogen bond acceptor
BGLU153electrostatic stabiliser, hydrogen bond acceptor
BHIS193electrostatic stabiliser, hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor

site_idMCSA3
Number of Residues9
DetailsM-CSA 243
ChainResidueDetails
CASN9electrostatic stabiliser, hydrogen bond donor
CHIS12attractive charge-charge interaction, hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor
CHIS45attractive charge-charge interaction, electrostatic stabiliser, hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor
CARG47attractive charge-charge interaction, electrostatic stabiliser, increase acidity, increase basicity
CARG51attractive charge-charge interaction, electrostatic stabiliser, hydrogen bond donor, increase acidity, increase basicity
CGLU72electrostatic stabiliser, hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor, proton relay
CTHR103electrostatic stabiliser, hydrogen bond acceptor
CGLU153electrostatic stabiliser, hydrogen bond acceptor
CHIS193electrostatic stabiliser, hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor

site_idMCSA4
Number of Residues9
DetailsM-CSA 243
ChainResidueDetails
DASN9electrostatic stabiliser, hydrogen bond donor
DHIS12attractive charge-charge interaction, hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor
DHIS45attractive charge-charge interaction, electrostatic stabiliser, hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor
DARG47attractive charge-charge interaction, electrostatic stabiliser, increase acidity, increase basicity
DARG51attractive charge-charge interaction, electrostatic stabiliser, hydrogen bond donor, increase acidity, increase basicity
DGLU72electrostatic stabiliser, hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor, proton relay
DTHR103electrostatic stabiliser, hydrogen bond acceptor
DGLU153electrostatic stabiliser, hydrogen bond acceptor
DHIS193electrostatic stabiliser, hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor

238895

PDB entries from 2025-07-16

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