1IR2
Crystal Structure of Activated Ribulose-1,5-bisphosphate Carboxylase/oxygenase (Rubisco) from Green alga, Chlamydomonas reinhardtii Complexed with 2-Carboxyarabinitol-1,5-bisphosphate (2-CABP)
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0000287 | molecular_function | magnesium ion binding |
A | 0004497 | molecular_function | monooxygenase activity |
A | 0009507 | cellular_component | chloroplast |
A | 0009536 | cellular_component | plastid |
A | 0009853 | biological_process | photorespiration |
A | 0015977 | biological_process | carbon fixation |
A | 0015979 | biological_process | photosynthesis |
A | 0016491 | molecular_function | oxidoreductase activity |
A | 0016829 | molecular_function | lyase activity |
A | 0016984 | molecular_function | ribulose-bisphosphate carboxylase activity |
A | 0019253 | biological_process | reductive pentose-phosphate cycle |
A | 0046872 | molecular_function | metal ion binding |
B | 0000287 | molecular_function | magnesium ion binding |
B | 0004497 | molecular_function | monooxygenase activity |
B | 0009507 | cellular_component | chloroplast |
B | 0009536 | cellular_component | plastid |
B | 0009853 | biological_process | photorespiration |
B | 0015977 | biological_process | carbon fixation |
B | 0015979 | biological_process | photosynthesis |
B | 0016491 | molecular_function | oxidoreductase activity |
B | 0016829 | molecular_function | lyase activity |
B | 0016984 | molecular_function | ribulose-bisphosphate carboxylase activity |
B | 0019253 | biological_process | reductive pentose-phosphate cycle |
B | 0046872 | molecular_function | metal ion binding |
C | 0000287 | molecular_function | magnesium ion binding |
C | 0004497 | molecular_function | monooxygenase activity |
C | 0009507 | cellular_component | chloroplast |
C | 0009536 | cellular_component | plastid |
C | 0009853 | biological_process | photorespiration |
C | 0015977 | biological_process | carbon fixation |
C | 0015979 | biological_process | photosynthesis |
C | 0016491 | molecular_function | oxidoreductase activity |
C | 0016829 | molecular_function | lyase activity |
C | 0016984 | molecular_function | ribulose-bisphosphate carboxylase activity |
C | 0019253 | biological_process | reductive pentose-phosphate cycle |
C | 0046872 | molecular_function | metal ion binding |
D | 0000287 | molecular_function | magnesium ion binding |
D | 0004497 | molecular_function | monooxygenase activity |
D | 0009507 | cellular_component | chloroplast |
D | 0009536 | cellular_component | plastid |
D | 0009853 | biological_process | photorespiration |
D | 0015977 | biological_process | carbon fixation |
D | 0015979 | biological_process | photosynthesis |
D | 0016491 | molecular_function | oxidoreductase activity |
D | 0016829 | molecular_function | lyase activity |
D | 0016984 | molecular_function | ribulose-bisphosphate carboxylase activity |
D | 0019253 | biological_process | reductive pentose-phosphate cycle |
D | 0046872 | molecular_function | metal ion binding |
E | 0000287 | molecular_function | magnesium ion binding |
E | 0004497 | molecular_function | monooxygenase activity |
E | 0009507 | cellular_component | chloroplast |
E | 0009536 | cellular_component | plastid |
E | 0009853 | biological_process | photorespiration |
E | 0015977 | biological_process | carbon fixation |
E | 0015979 | biological_process | photosynthesis |
E | 0016491 | molecular_function | oxidoreductase activity |
E | 0016829 | molecular_function | lyase activity |
E | 0016984 | molecular_function | ribulose-bisphosphate carboxylase activity |
E | 0019253 | biological_process | reductive pentose-phosphate cycle |
E | 0046872 | molecular_function | metal ion binding |
F | 0000287 | molecular_function | magnesium ion binding |
F | 0004497 | molecular_function | monooxygenase activity |
F | 0009507 | cellular_component | chloroplast |
F | 0009536 | cellular_component | plastid |
F | 0009853 | biological_process | photorespiration |
F | 0015977 | biological_process | carbon fixation |
F | 0015979 | biological_process | photosynthesis |
F | 0016491 | molecular_function | oxidoreductase activity |
F | 0016829 | molecular_function | lyase activity |
F | 0016984 | molecular_function | ribulose-bisphosphate carboxylase activity |
F | 0019253 | biological_process | reductive pentose-phosphate cycle |
F | 0046872 | molecular_function | metal ion binding |
G | 0000287 | molecular_function | magnesium ion binding |
G | 0004497 | molecular_function | monooxygenase activity |
G | 0009507 | cellular_component | chloroplast |
G | 0009536 | cellular_component | plastid |
G | 0009853 | biological_process | photorespiration |
G | 0015977 | biological_process | carbon fixation |
G | 0015979 | biological_process | photosynthesis |
G | 0016491 | molecular_function | oxidoreductase activity |
G | 0016829 | molecular_function | lyase activity |
G | 0016984 | molecular_function | ribulose-bisphosphate carboxylase activity |
G | 0019253 | biological_process | reductive pentose-phosphate cycle |
G | 0046872 | molecular_function | metal ion binding |
H | 0000287 | molecular_function | magnesium ion binding |
H | 0004497 | molecular_function | monooxygenase activity |
H | 0009507 | cellular_component | chloroplast |
H | 0009536 | cellular_component | plastid |
H | 0009853 | biological_process | photorespiration |
H | 0015977 | biological_process | carbon fixation |
H | 0015979 | biological_process | photosynthesis |
H | 0016491 | molecular_function | oxidoreductase activity |
H | 0016829 | molecular_function | lyase activity |
H | 0016984 | molecular_function | ribulose-bisphosphate carboxylase activity |
H | 0019253 | biological_process | reductive pentose-phosphate cycle |
H | 0046872 | molecular_function | metal ion binding |
S | 0000287 | molecular_function | magnesium ion binding |
S | 0004497 | molecular_function | monooxygenase activity |
S | 0009507 | cellular_component | chloroplast |
S | 0009536 | cellular_component | plastid |
S | 0009853 | biological_process | photorespiration |
S | 0015977 | biological_process | carbon fixation |
S | 0015979 | biological_process | photosynthesis |
S | 0016491 | molecular_function | oxidoreductase activity |
S | 0016829 | molecular_function | lyase activity |
S | 0016984 | molecular_function | ribulose-bisphosphate carboxylase activity |
S | 0019253 | biological_process | reductive pentose-phosphate cycle |
S | 0046872 | molecular_function | metal ion binding |
T | 0000287 | molecular_function | magnesium ion binding |
T | 0004497 | molecular_function | monooxygenase activity |
T | 0009507 | cellular_component | chloroplast |
T | 0009536 | cellular_component | plastid |
T | 0009853 | biological_process | photorespiration |
T | 0015977 | biological_process | carbon fixation |
T | 0015979 | biological_process | photosynthesis |
T | 0016491 | molecular_function | oxidoreductase activity |
T | 0016829 | molecular_function | lyase activity |
T | 0016984 | molecular_function | ribulose-bisphosphate carboxylase activity |
T | 0019253 | biological_process | reductive pentose-phosphate cycle |
T | 0046872 | molecular_function | metal ion binding |
U | 0000287 | molecular_function | magnesium ion binding |
U | 0004497 | molecular_function | monooxygenase activity |
U | 0009507 | cellular_component | chloroplast |
U | 0009536 | cellular_component | plastid |
U | 0009853 | biological_process | photorespiration |
U | 0015977 | biological_process | carbon fixation |
U | 0015979 | biological_process | photosynthesis |
U | 0016491 | molecular_function | oxidoreductase activity |
U | 0016829 | molecular_function | lyase activity |
U | 0016984 | molecular_function | ribulose-bisphosphate carboxylase activity |
U | 0019253 | biological_process | reductive pentose-phosphate cycle |
U | 0046872 | molecular_function | metal ion binding |
V | 0000287 | molecular_function | magnesium ion binding |
V | 0004497 | molecular_function | monooxygenase activity |
V | 0009507 | cellular_component | chloroplast |
V | 0009536 | cellular_component | plastid |
V | 0009853 | biological_process | photorespiration |
V | 0015977 | biological_process | carbon fixation |
V | 0015979 | biological_process | photosynthesis |
V | 0016491 | molecular_function | oxidoreductase activity |
V | 0016829 | molecular_function | lyase activity |
V | 0016984 | molecular_function | ribulose-bisphosphate carboxylase activity |
V | 0019253 | biological_process | reductive pentose-phosphate cycle |
V | 0046872 | molecular_function | metal ion binding |
W | 0000287 | molecular_function | magnesium ion binding |
W | 0004497 | molecular_function | monooxygenase activity |
W | 0009507 | cellular_component | chloroplast |
W | 0009536 | cellular_component | plastid |
W | 0009853 | biological_process | photorespiration |
W | 0015977 | biological_process | carbon fixation |
W | 0015979 | biological_process | photosynthesis |
W | 0016491 | molecular_function | oxidoreductase activity |
W | 0016829 | molecular_function | lyase activity |
W | 0016984 | molecular_function | ribulose-bisphosphate carboxylase activity |
W | 0019253 | biological_process | reductive pentose-phosphate cycle |
W | 0046872 | molecular_function | metal ion binding |
X | 0000287 | molecular_function | magnesium ion binding |
X | 0004497 | molecular_function | monooxygenase activity |
X | 0009507 | cellular_component | chloroplast |
X | 0009536 | cellular_component | plastid |
X | 0009853 | biological_process | photorespiration |
X | 0015977 | biological_process | carbon fixation |
X | 0015979 | biological_process | photosynthesis |
X | 0016491 | molecular_function | oxidoreductase activity |
X | 0016829 | molecular_function | lyase activity |
X | 0016984 | molecular_function | ribulose-bisphosphate carboxylase activity |
X | 0019253 | biological_process | reductive pentose-phosphate cycle |
X | 0046872 | molecular_function | metal ion binding |
Y | 0000287 | molecular_function | magnesium ion binding |
Y | 0004497 | molecular_function | monooxygenase activity |
Y | 0009507 | cellular_component | chloroplast |
Y | 0009536 | cellular_component | plastid |
Y | 0009853 | biological_process | photorespiration |
Y | 0015977 | biological_process | carbon fixation |
Y | 0015979 | biological_process | photosynthesis |
Y | 0016491 | molecular_function | oxidoreductase activity |
Y | 0016829 | molecular_function | lyase activity |
Y | 0016984 | molecular_function | ribulose-bisphosphate carboxylase activity |
Y | 0019253 | biological_process | reductive pentose-phosphate cycle |
Y | 0046872 | molecular_function | metal ion binding |
Z | 0000287 | molecular_function | magnesium ion binding |
Z | 0004497 | molecular_function | monooxygenase activity |
Z | 0009507 | cellular_component | chloroplast |
Z | 0009536 | cellular_component | plastid |
Z | 0009853 | biological_process | photorespiration |
Z | 0015977 | biological_process | carbon fixation |
Z | 0015979 | biological_process | photosynthesis |
Z | 0016491 | molecular_function | oxidoreductase activity |
Z | 0016829 | molecular_function | lyase activity |
Z | 0016984 | molecular_function | ribulose-bisphosphate carboxylase activity |
Z | 0019253 | biological_process | reductive pentose-phosphate cycle |
Z | 0046872 | molecular_function | metal ion binding |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE MG A 476 |
Chain | Residue |
A | KCX201 |
A | ASP203 |
A | GLU204 |
A | CAP501 |
site_id | AC2 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE MG B 476 |
Chain | Residue |
B | LYS177 |
B | KCX201 |
B | ASP203 |
B | GLU204 |
B | CAP501 |
site_id | AC3 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE MG C 476 |
Chain | Residue |
C | LYS177 |
C | KCX201 |
C | ASP203 |
C | GLU204 |
C | CAP501 |
site_id | AC4 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE MG D 476 |
Chain | Residue |
D | KCX201 |
D | ASP203 |
D | GLU204 |
D | CAP501 |
site_id | AC5 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE MG E 476 |
Chain | Residue |
E | KCX201 |
E | ASP203 |
E | GLU204 |
E | CAP501 |
site_id | AC6 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE MG F 476 |
Chain | Residue |
F | LYS177 |
F | KCX201 |
F | ASP203 |
F | GLU204 |
F | CAP501 |
site_id | AC7 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE MG G 476 |
Chain | Residue |
G | LYS177 |
G | KCX201 |
G | ASP203 |
G | GLU204 |
G | CAP501 |
site_id | AC8 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE MG H 476 |
Chain | Residue |
H | KCX201 |
H | ASP203 |
H | GLU204 |
H | CAP501 |
site_id | AC9 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE MG S 476 |
Chain | Residue |
S | KCX201 |
S | ASP203 |
S | GLU204 |
S | CAP501 |
site_id | BC1 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE MG T 476 |
Chain | Residue |
T | KCX201 |
T | ASP203 |
T | GLU204 |
T | CAP501 |
site_id | BC2 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE MG U 476 |
Chain | Residue |
U | LYS177 |
U | KCX201 |
U | ASP203 |
U | GLU204 |
U | CAP501 |
site_id | BC3 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE MG V 476 |
Chain | Residue |
V | KCX201 |
V | ASP203 |
V | GLU204 |
V | CAP501 |
site_id | BC4 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE MG W 476 |
Chain | Residue |
W | LYS177 |
W | KCX201 |
W | ASP203 |
W | GLU204 |
W | CAP501 |
site_id | BC5 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE MG X 476 |
Chain | Residue |
X | LYS177 |
X | KCX201 |
X | ASP203 |
X | GLU204 |
X | CAP501 |
site_id | BC6 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE MG Y 476 |
Chain | Residue |
Y | LYS177 |
Y | KCX201 |
Y | ASP203 |
Y | GLU204 |
Y | CAP501 |
site_id | BC7 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE MG Z 476 |
Chain | Residue |
Z | LYS177 |
Z | KCX201 |
Z | ASP203 |
Z | GLU204 |
Z | CAP501 |
site_id | BC8 |
Number of Residues | 29 |
Details | BINDING SITE FOR RESIDUE CAP A 501 |
Chain | Residue |
E | ASN123 |
E | HOH678 |
E | HOH731 |
A | THR173 |
A | LYS175 |
A | LYS177 |
A | KCX201 |
A | ASP203 |
A | GLU204 |
A | HIS294 |
A | ARG295 |
A | HIS327 |
A | LYS334 |
A | LEU335 |
A | SER379 |
A | GLY380 |
A | GLY381 |
A | GLY403 |
A | GLY404 |
A | MG476 |
A | HOH616 |
A | HOH617 |
A | HOH621 |
A | HOH630 |
A | HOH660 |
A | HOH679 |
E | GLU60 |
E | THR65 |
E | TRP66 |
site_id | BC9 |
Number of Residues | 29 |
Details | BINDING SITE FOR RESIDUE CAP B 501 |
Chain | Residue |
B | THR173 |
B | LYS175 |
B | LYS177 |
B | KCX201 |
B | ASP203 |
B | GLU204 |
B | HIS294 |
B | ARG295 |
B | HIS327 |
B | LYS334 |
B | LEU335 |
B | SER379 |
B | GLY380 |
B | GLY381 |
B | GLY403 |
B | GLY404 |
B | MG476 |
B | HOH615 |
B | HOH622 |
B | HOH653 |
B | HOH657 |
B | HOH678 |
B | HOH700 |
F | GLU60 |
F | THR65 |
F | TRP66 |
F | ASN123 |
F | HOH646 |
F | HOH648 |
site_id | CC1 |
Number of Residues | 29 |
Details | BINDING SITE FOR RESIDUE CAP C 501 |
Chain | Residue |
C | THR173 |
C | LYS175 |
C | LYS177 |
C | KCX201 |
C | ASP203 |
C | GLU204 |
C | HIS294 |
C | ARG295 |
C | HIS327 |
C | LYS334 |
C | LEU335 |
C | SER379 |
C | GLY380 |
C | GLY381 |
C | GLY403 |
C | GLY404 |
C | MG476 |
C | HOH618 |
C | HOH625 |
C | HOH637 |
C | HOH646 |
C | HOH657 |
C | HOH909 |
G | GLU60 |
G | THR65 |
G | TRP66 |
G | ASN123 |
G | HOH639 |
G | HOH675 |
site_id | CC2 |
Number of Residues | 29 |
Details | BINDING SITE FOR RESIDUE CAP D 501 |
Chain | Residue |
D | THR173 |
D | LYS175 |
D | LYS177 |
D | KCX201 |
D | ASP203 |
D | GLU204 |
D | HIS294 |
D | ARG295 |
D | HIS327 |
D | LYS334 |
D | LEU335 |
D | SER379 |
D | GLY380 |
D | GLY381 |
D | GLY403 |
D | GLY404 |
D | MG476 |
D | HOH617 |
D | HOH618 |
D | HOH621 |
D | HOH658 |
D | HOH661 |
D | HOH805 |
H | GLU60 |
H | THR65 |
H | TRP66 |
H | ASN123 |
H | HOH621 |
H | HOH644 |
site_id | CC3 |
Number of Residues | 30 |
Details | BINDING SITE FOR RESIDUE CAP E 501 |
Chain | Residue |
A | GLU60 |
A | THR65 |
A | TRP66 |
A | ASN123 |
A | HOH657 |
A | HOH779 |
E | THR173 |
E | LYS175 |
E | LYS177 |
E | KCX201 |
E | ASP203 |
E | GLU204 |
E | HIS294 |
E | ARG295 |
E | HIS327 |
E | LYS334 |
E | LEU335 |
E | SER379 |
E | GLY380 |
E | GLY381 |
E | GLY403 |
E | GLY404 |
E | MG476 |
E | HOH623 |
E | HOH630 |
E | HOH632 |
E | HOH635 |
E | HOH659 |
E | HOH698 |
E | HOH778 |
site_id | CC4 |
Number of Residues | 29 |
Details | BINDING SITE FOR RESIDUE CAP F 501 |
Chain | Residue |
B | GLU60 |
B | THR65 |
B | TRP66 |
B | ASN123 |
B | HOH620 |
B | HOH666 |
F | THR173 |
F | LYS175 |
F | LYS177 |
F | KCX201 |
F | ASP203 |
F | GLU204 |
F | HIS294 |
F | ARG295 |
F | HIS327 |
F | LYS334 |
F | LEU335 |
F | SER379 |
F | GLY380 |
F | GLY381 |
F | GLY403 |
F | GLY404 |
F | MG476 |
F | HOH619 |
F | HOH625 |
F | HOH641 |
F | HOH652 |
F | HOH704 |
F | HOH786 |
site_id | CC5 |
Number of Residues | 29 |
Details | BINDING SITE FOR RESIDUE CAP G 501 |
Chain | Residue |
C | GLU60 |
C | THR65 |
C | TRP66 |
C | ASN123 |
C | HOH621 |
C | HOH645 |
G | THR173 |
G | LYS175 |
G | LYS177 |
G | KCX201 |
G | ASP203 |
G | GLU204 |
G | HIS294 |
G | ARG295 |
G | HIS327 |
G | LYS334 |
G | LEU335 |
G | SER379 |
G | GLY380 |
G | GLY381 |
G | GLY403 |
G | GLY404 |
G | MG476 |
G | HOH620 |
G | HOH631 |
G | HOH642 |
G | HOH648 |
G | HOH656 |
G | HOH721 |
site_id | CC6 |
Number of Residues | 29 |
Details | BINDING SITE FOR RESIDUE CAP H 501 |
Chain | Residue |
D | GLU60 |
D | THR65 |
D | TRP66 |
D | ASN123 |
D | HOH652 |
D | HOH659 |
H | THR173 |
H | LYS175 |
H | LYS177 |
H | KCX201 |
H | ASP203 |
H | GLU204 |
H | HIS294 |
H | ARG295 |
H | HIS327 |
H | LYS334 |
H | LEU335 |
H | SER379 |
H | GLY380 |
H | GLY381 |
H | GLY403 |
H | GLY404 |
H | MG476 |
H | HOH624 |
H | HOH628 |
H | HOH630 |
H | HOH637 |
H | HOH682 |
H | HOH726 |
site_id | CC7 |
Number of Residues | 29 |
Details | BINDING SITE FOR RESIDUE CAP S 501 |
Chain | Residue |
S | THR173 |
S | LYS175 |
S | LYS177 |
S | KCX201 |
S | ASP203 |
S | GLU204 |
S | HIS294 |
S | ARG295 |
S | HIS327 |
S | LYS334 |
S | LEU335 |
S | SER379 |
S | GLY380 |
S | GLY381 |
S | GLY403 |
S | GLY404 |
S | MG476 |
S | HOH614 |
S | HOH615 |
S | HOH623 |
S | HOH653 |
S | HOH676 |
S | HOH694 |
S | HOH758 |
W | GLU60 |
W | THR65 |
W | TRP66 |
W | ASN123 |
W | HOH629 |
site_id | CC8 |
Number of Residues | 28 |
Details | BINDING SITE FOR RESIDUE CAP T 501 |
Chain | Residue |
T | THR173 |
T | LYS175 |
T | LYS177 |
T | KCX201 |
T | ASP203 |
T | GLU204 |
T | HIS294 |
T | ARG295 |
T | HIS327 |
T | LYS334 |
T | LEU335 |
T | SER379 |
T | GLY380 |
T | GLY381 |
T | GLY403 |
T | GLY404 |
T | MG476 |
T | HOH615 |
T | HOH662 |
T | HOH717 |
T | HOH721 |
T | HOH802 |
T | HOH886 |
X | GLU60 |
X | THR65 |
X | TRP66 |
X | ASN123 |
X | HOH633 |
site_id | CC9 |
Number of Residues | 29 |
Details | BINDING SITE FOR RESIDUE CAP U 501 |
Chain | Residue |
U | THR173 |
U | LYS175 |
U | LYS177 |
U | KCX201 |
U | ASP203 |
U | GLU204 |
U | HIS294 |
U | ARG295 |
U | HIS327 |
U | LYS334 |
U | LEU335 |
U | SER379 |
U | GLY380 |
U | GLY381 |
U | GLY403 |
U | GLY404 |
U | MG476 |
U | HOH620 |
U | HOH625 |
U | HOH667 |
U | HOH705 |
U | HOH706 |
U | HOH779 |
Y | GLU60 |
Y | THR65 |
Y | TRP66 |
Y | ASN123 |
Y | HOH619 |
Y | HOH715 |
site_id | DC1 |
Number of Residues | 28 |
Details | BINDING SITE FOR RESIDUE CAP V 501 |
Chain | Residue |
V | THR173 |
V | LYS175 |
V | LYS177 |
V | KCX201 |
V | ASP203 |
V | GLU204 |
V | HIS294 |
V | ARG295 |
V | HIS327 |
V | LYS334 |
V | LEU335 |
V | SER379 |
V | GLY380 |
V | GLY381 |
V | GLY403 |
V | GLY404 |
V | MG476 |
V | HOH617 |
V | HOH620 |
V | HOH623 |
V | HOH673 |
V | HOH701 |
V | HOH703 |
Z | GLU60 |
Z | THR65 |
Z | TRP66 |
Z | ASN123 |
Z | HOH657 |
site_id | DC2 |
Number of Residues | 30 |
Details | BINDING SITE FOR RESIDUE CAP W 501 |
Chain | Residue |
S | GLU60 |
S | THR65 |
S | TRP66 |
S | ASN123 |
S | HOH624 |
W | THR173 |
W | LYS175 |
W | LYS177 |
W | KCX201 |
W | ASP203 |
W | GLU204 |
W | HIS294 |
W | ARG295 |
W | HIS327 |
W | LYS334 |
W | LEU335 |
W | SER379 |
W | GLY380 |
W | GLY381 |
W | GLY403 |
W | GLY404 |
W | MG476 |
W | HOH626 |
W | HOH632 |
W | HOH655 |
W | HOH661 |
W | HOH662 |
W | HOH665 |
W | HOH704 |
W | HOH874 |
site_id | DC3 |
Number of Residues | 29 |
Details | BINDING SITE FOR RESIDUE CAP X 501 |
Chain | Residue |
T | GLU60 |
T | THR65 |
T | TRP66 |
T | ASN123 |
T | HOH664 |
T | HOH680 |
X | THR173 |
X | LYS175 |
X | LYS177 |
X | KCX201 |
X | ASP203 |
X | GLU204 |
X | HIS294 |
X | ARG295 |
X | HIS327 |
X | LYS334 |
X | LEU335 |
X | SER379 |
X | GLY380 |
X | GLY381 |
X | GLY403 |
X | GLY404 |
X | MG476 |
X | HOH618 |
X | HOH635 |
X | HOH637 |
X | HOH650 |
X | HOH652 |
X | HOH764 |
site_id | DC4 |
Number of Residues | 30 |
Details | BINDING SITE FOR RESIDUE CAP Y 501 |
Chain | Residue |
U | GLU60 |
U | THR65 |
U | TRP66 |
U | ASN123 |
U | HOH622 |
U | HOH629 |
Y | THR173 |
Y | LYS175 |
Y | LYS177 |
Y | KCX201 |
Y | ASP203 |
Y | GLU204 |
Y | HIS294 |
Y | ARG295 |
Y | HIS327 |
Y | LYS334 |
Y | LEU335 |
Y | SER379 |
Y | GLY380 |
Y | GLY381 |
Y | GLY403 |
Y | GLY404 |
Y | MG476 |
Y | HOH620 |
Y | HOH627 |
Y | HOH629 |
Y | HOH645 |
Y | HOH659 |
Y | HOH749 |
Y | HOH750 |
site_id | DC5 |
Number of Residues | 28 |
Details | BINDING SITE FOR RESIDUE CAP Z 501 |
Chain | Residue |
V | GLU60 |
V | THR65 |
V | TRP66 |
V | ASN123 |
V | HOH671 |
Z | THR173 |
Z | LYS175 |
Z | LYS177 |
Z | KCX201 |
Z | ASP203 |
Z | GLU204 |
Z | HIS294 |
Z | ARG295 |
Z | HIS327 |
Z | LYS334 |
Z | LEU335 |
Z | SER379 |
Z | GLY380 |
Z | GLY381 |
Z | GLY403 |
Z | GLY404 |
Z | MG476 |
Z | HOH624 |
Z | HOH625 |
Z | HOH627 |
Z | HOH628 |
Z | HOH629 |
Z | HOH787 |
site_id | DC6 |
Number of Residues | 9 |
Details | BINDING SITE FOR RESIDUE GOL E 601 |
Chain | Residue |
E | VAL17 |
E | LYS18 |
E | THR65 |
E | TRP66 |
E | THR67 |
E | THR68 |
E | HOH656 |
E | HOH670 |
E | HOH792 |
site_id | DC7 |
Number of Residues | 9 |
Details | BINDING SITE FOR RESIDUE GOL F 602 |
Chain | Residue |
F | VAL17 |
F | LYS18 |
F | THR65 |
F | TRP66 |
F | THR67 |
F | THR68 |
F | HOH659 |
F | HOH701 |
F | HOH795 |
site_id | DC8 |
Number of Residues | 9 |
Details | BINDING SITE FOR RESIDUE GOL G 603 |
Chain | Residue |
G | VAL17 |
G | LYS18 |
G | THR65 |
G | TRP66 |
G | THR67 |
G | THR68 |
G | HOH676 |
G | HOH776 |
G | HOH780 |
site_id | DC9 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE GOL H 604 |
Chain | Residue |
H | LYS18 |
H | TYR24 |
H | THR65 |
H | TRP66 |
H | THR67 |
H | THR68 |
H | HOH732 |
H | HOH784 |
site_id | EC1 |
Number of Residues | 9 |
Details | BINDING SITE FOR RESIDUE GOL A 605 |
Chain | Residue |
A | LYS18 |
A | THR65 |
A | TRP66 |
A | THR67 |
A | THR68 |
A | HOH688 |
A | HOH751 |
A | HOH795 |
A | HOH821 |
site_id | EC2 |
Number of Residues | 10 |
Details | BINDING SITE FOR RESIDUE GOL B 606 |
Chain | Residue |
B | VAL17 |
B | LYS18 |
B | THR65 |
B | TRP66 |
B | THR67 |
B | THR68 |
B | HOH638 |
B | HOH652 |
B | HOH726 |
B | HOH728 |
site_id | EC3 |
Number of Residues | 10 |
Details | BINDING SITE FOR RESIDUE GOL C 607 |
Chain | Residue |
C | VAL17 |
C | LYS18 |
C | THR65 |
C | TRP66 |
C | THR67 |
C | THR68 |
C | HOH627 |
C | HOH761 |
C | HOH763 |
C | HOH954 |
site_id | EC4 |
Number of Residues | 9 |
Details | BINDING SITE FOR RESIDUE GOL D 608 |
Chain | Residue |
D | VAL17 |
D | LYS18 |
D | THR65 |
D | TRP66 |
D | THR67 |
D | THR68 |
D | HOH665 |
D | HOH741 |
D | HOH815 |
site_id | EC5 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE GOL E 609 |
Chain | Residue |
A | LEU270 |
E | LEU270 |
E | MET297 |
E | HOH717 |
E | HOH729 |
E | HOH813 |
site_id | EC6 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE GOL B 610 |
Chain | Residue |
B | LEU270 |
B | HOH769 |
B | HOH789 |
F | LEU270 |
F | MET297 |
F | HOH663 |
site_id | EC7 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE GOL G 611 |
Chain | Residue |
C | LEU270 |
C | HOH648 |
G | LEU270 |
G | MET297 |
G | HOH636 |
G | HOH816 |
site_id | EC8 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE GOL H 612 |
Chain | Residue |
D | LEU270 |
H | LEU270 |
H | MET297 |
H | HOH675 |
H | HOH742 |
H | HOH922 |
site_id | EC9 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE GOL A 613 |
Chain | Residue |
A | VAL149 |
A | ARG285 |
A | ASP286 |
A | HOH710 |
A | HOH769 |
A | HOH974 |
B | LYS252 |
B | HOH634 |
site_id | FC1 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE GOL B 614 |
Chain | Residue |
B | ILE282 |
B | ARG285 |
B | ASP286 |
B | HOH661 |
B | HOH747 |
C | LYS252 |
site_id | FC2 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE GOL C 615 |
Chain | Residue |
C | ILE282 |
C | ARG285 |
C | ASP286 |
C | HOH719 |
C | HOH1060 |
D | LYS252 |
D | HOH642 |
site_id | FC3 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE GOL D 616 |
Chain | Residue |
A | LYS252 |
A | HOH642 |
D | ILE282 |
D | ARG285 |
D | ASP286 |
D | HOH720 |
D | HOH875 |
D | HOH1059 |
site_id | FC4 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE GOL F 617 |
Chain | Residue |
E | LYS252 |
E | HOH683 |
F | ILE282 |
F | ARG285 |
F | ASP286 |
F | HOH757 |
site_id | FC5 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE GOL G 618 |
Chain | Residue |
F | LYS252 |
F | HOH722 |
G | ARG285 |
G | ASP286 |
G | HOH732 |
G | HOH1026 |
site_id | FC6 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE GOL H 619 |
Chain | Residue |
G | LYS252 |
G | HOH740 |
H | ILE282 |
H | ASP286 |
H | HOH739 |
H | HOH906 |
H | HOH1023 |
site_id | FC7 |
Number of Residues | 9 |
Details | BINDING SITE FOR RESIDUE GOL E 620 |
Chain | Residue |
E | VAL149 |
E | ILE282 |
E | ARG285 |
E | ASP286 |
E | HOH701 |
E | HOH1004 |
E | HOH1057 |
H | LYS252 |
H | HOH671 |
site_id | FC8 |
Number of Residues | 9 |
Details | BINDING SITE FOR RESIDUE GOL W 601 |
Chain | Residue |
W | VAL17 |
W | LYS18 |
W | THR65 |
W | TRP66 |
W | THR67 |
W | THR68 |
W | HOH731 |
W | HOH794 |
W | HOH910 |
site_id | FC9 |
Number of Residues | 10 |
Details | BINDING SITE FOR RESIDUE GOL X 602 |
Chain | Residue |
X | VAL17 |
X | LYS18 |
X | THR65 |
X | TRP66 |
X | THR67 |
X | THR68 |
X | HOH636 |
X | HOH648 |
X | HOH738 |
X | HOH869 |
site_id | GC1 |
Number of Residues | 9 |
Details | BINDING SITE FOR RESIDUE GOL Y 603 |
Chain | Residue |
Y | VAL17 |
Y | LYS18 |
Y | THR65 |
Y | TRP66 |
Y | THR67 |
Y | THR68 |
Y | HOH634 |
Y | HOH842 |
Y | HOH957 |
site_id | GC2 |
Number of Residues | 10 |
Details | BINDING SITE FOR RESIDUE GOL Z 604 |
Chain | Residue |
Z | VAL17 |
Z | LYS18 |
Z | THR65 |
Z | TRP66 |
Z | THR67 |
Z | THR68 |
Z | HOH769 |
Z | HOH772 |
Z | HOH800 |
Z | HOH867 |
site_id | GC3 |
Number of Residues | 9 |
Details | BINDING SITE FOR RESIDUE GOL S 605 |
Chain | Residue |
S | VAL17 |
S | LYS18 |
S | THR65 |
S | TRP66 |
S | THR67 |
S | THR68 |
S | HOH773 |
S | HOH888 |
S | HOH901 |
site_id | GC4 |
Number of Residues | 9 |
Details | BINDING SITE FOR RESIDUE GOL T 606 |
Chain | Residue |
T | VAL17 |
T | LYS18 |
T | THR65 |
T | TRP66 |
T | THR67 |
T | THR68 |
T | HOH655 |
T | HOH770 |
T | HOH894 |
site_id | GC5 |
Number of Residues | 10 |
Details | BINDING SITE FOR RESIDUE GOL U 607 |
Chain | Residue |
U | VAL17 |
U | LYS18 |
U | THR65 |
U | TRP66 |
U | THR67 |
U | THR68 |
U | HOH659 |
U | HOH717 |
U | HOH888 |
U | HOH945 |
site_id | GC6 |
Number of Residues | 9 |
Details | BINDING SITE FOR RESIDUE GOL V 608 |
Chain | Residue |
V | VAL17 |
V | LYS18 |
V | THR65 |
V | TRP66 |
V | THR67 |
V | THR68 |
V | HOH624 |
V | HOH751 |
V | HOH806 |
site_id | GC7 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE GOL S 609 |
Chain | Residue |
S | LEU270 |
S | MET297 |
S | HOH638 |
S | HOH677 |
S | HOH992 |
S | HOH1002 |
W | LEU270 |
W | ILE301 |
site_id | GC8 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE GOL X 610 |
Chain | Residue |
T | LEU270 |
T | HOH749 |
X | LEU270 |
X | MET297 |
X | HOH726 |
X | HOH812 |
site_id | GC9 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE GOL Y 611 |
Chain | Residue |
U | LEU270 |
Y | LEU270 |
Y | MET297 |
Y | HOH670 |
Y | HOH724 |
Y | HOH869 |
site_id | HC1 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE GOL Z 612 |
Chain | Residue |
V | LEU270 |
V | MET297 |
Z | LEU270 |
Z | HOH673 |
Z | HOH728 |
Z | HOH959 |
site_id | HC2 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE GOL S 613 |
Chain | Residue |
S | ILE282 |
S | ARG285 |
S | ASP286 |
S | HOH680 |
S | HOH892 |
S | HOH1034 |
T | LYS252 |
T | HOH631 |
site_id | HC3 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE GOL T 614 |
Chain | Residue |
T | ARG285 |
T | ASP286 |
T | HOH726 |
T | HOH981 |
U | GLU249 |
U | LYS252 |
U | HOH639 |
site_id | HC4 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE GOL U 615 |
Chain | Residue |
U | VAL149 |
U | ILE282 |
U | ARG285 |
U | ASP286 |
U | HOH686 |
U | HOH985 |
V | LYS252 |
V | HOH714 |
site_id | HC5 |
Number of Residues | 9 |
Details | BINDING SITE FOR RESIDUE GOL V 616 |
Chain | Residue |
S | LYS252 |
S | HOH656 |
V | VAL149 |
V | ILE282 |
V | ARG285 |
V | ASP286 |
V | HOH719 |
V | HOH808 |
V | HOH1019 |
site_id | HC6 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE GOL X 617 |
Chain | Residue |
W | LYS252 |
X | ARG285 |
X | ASP286 |
X | HOH673 |
X | HOH753 |
X | HOH921 |
site_id | HC7 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE GOL Y 618 |
Chain | Residue |
X | LYS252 |
X | HOH710 |
Y | VAL149 |
Y | ILE282 |
Y | ASP286 |
Y | HOH887 |
Y | HOH923 |
Y | HOH951 |
site_id | HC8 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE GOL Z 619 |
Chain | Residue |
Y | LYS252 |
Y | HOH692 |
Z | ARG285 |
Z | ASP286 |
Z | HOH726 |
Z | HOH752 |
Z | HOH921 |
site_id | HC9 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE GOL W 620 |
Chain | Residue |
W | VAL149 |
W | ILE282 |
W | ARG285 |
W | ASP286 |
W | HOH675 |
W | HOH841 |
Z | LYS252 |
Z | HOH623 |
Functional Information from PROSITE/UniProt
site_id | PS00157 |
Number of Residues | 9 |
Details | RUBISCO_LARGE Ribulose bisphosphate carboxylase large chain active site. GlDFtKdDE |
Chain | Residue | Details |
A | GLY196-GLU204 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 32 |
Details | Active site: {"description":"Proton acceptor"} |
Chain | Residue | Details |
site_id | SWS_FT_FI2 |
Number of Residues | 16 |
Details | Binding site: {"description":"in homodimeric partner"} |
Chain | Residue | Details |
site_id | SWS_FT_FI3 |
Number of Residues | 80 |
Details | Binding site: {} |
Chain | Residue | Details |
site_id | SWS_FT_FI4 |
Number of Residues | 16 |
Details | Binding site: {"description":"via carbamate group","evidences":[{"source":"PubMed","id":"11641402","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"11866526","evidenceCode":"ECO:0000269"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI5 |
Number of Residues | 32 |
Details | Binding site: {"evidences":[{"source":"PubMed","id":"11641402","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"11866526","evidenceCode":"ECO:0000269"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI6 |
Number of Residues | 16 |
Details | Site: {"description":"Transition state stabilizer"} |
Chain | Residue | Details |
site_id | SWS_FT_FI7 |
Number of Residues | 32 |
Details | Modified residue: {"description":"4-hydroxyproline","evidences":[{"source":"PubMed","id":"11641402","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"11866526","evidenceCode":"ECO:0000269"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI8 |
Number of Residues | 16 |
Details | Modified residue: {"description":"N6-carboxylysine","evidences":[{"source":"PubMed","id":"11641402","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"11866526","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"6302265","evidenceCode":"ECO:0000269"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI9 |
Number of Residues | 32 |
Details | Modified residue: {"description":"S-methylcysteine","evidences":[{"source":"PubMed","id":"11641402","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"11866526","evidenceCode":"ECO:0000269"}]} |
Chain | Residue | Details |
Catalytic Information from CSA
site_id | CSA1 |
Number of Residues | 5 |
Details | Annotated By Reference To The Literature 1rbl |
Chain | Residue | Details |
A | LYS175 | |
A | HIS294 | |
A | LYS177 | |
A | ASP203 | |
A | HIS327 |
site_id | CSA10 |
Number of Residues | 5 |
Details | Annotated By Reference To The Literature 1rbl |
Chain | Residue | Details |
T | LYS175 | |
T | HIS294 | |
T | LYS177 | |
T | ASP203 | |
T | HIS327 |
site_id | CSA11 |
Number of Residues | 5 |
Details | Annotated By Reference To The Literature 1rbl |
Chain | Residue | Details |
U | LYS175 | |
U | HIS294 | |
U | LYS177 | |
U | ASP203 | |
U | HIS327 |
site_id | CSA12 |
Number of Residues | 5 |
Details | Annotated By Reference To The Literature 1rbl |
Chain | Residue | Details |
V | LYS175 | |
V | HIS294 | |
V | LYS177 | |
V | ASP203 | |
V | HIS327 |
site_id | CSA13 |
Number of Residues | 5 |
Details | Annotated By Reference To The Literature 1rbl |
Chain | Residue | Details |
W | LYS175 | |
W | HIS294 | |
W | LYS177 | |
W | ASP203 | |
W | HIS327 |
site_id | CSA14 |
Number of Residues | 5 |
Details | Annotated By Reference To The Literature 1rbl |
Chain | Residue | Details |
X | LYS175 | |
X | HIS294 | |
X | LYS177 | |
X | ASP203 | |
X | HIS327 |
site_id | CSA15 |
Number of Residues | 5 |
Details | Annotated By Reference To The Literature 1rbl |
Chain | Residue | Details |
Y | LYS175 | |
Y | HIS294 | |
Y | LYS177 | |
Y | ASP203 | |
Y | HIS327 |
site_id | CSA16 |
Number of Residues | 5 |
Details | Annotated By Reference To The Literature 1rbl |
Chain | Residue | Details |
Z | LYS175 | |
Z | HIS294 | |
Z | LYS177 | |
Z | ASP203 | |
Z | HIS327 |
site_id | CSA2 |
Number of Residues | 5 |
Details | Annotated By Reference To The Literature 1rbl |
Chain | Residue | Details |
B | LYS175 | |
B | HIS294 | |
B | LYS177 | |
B | ASP203 | |
B | HIS327 |
site_id | CSA3 |
Number of Residues | 5 |
Details | Annotated By Reference To The Literature 1rbl |
Chain | Residue | Details |
C | LYS175 | |
C | HIS294 | |
C | LYS177 | |
C | ASP203 | |
C | HIS327 |
site_id | CSA4 |
Number of Residues | 5 |
Details | Annotated By Reference To The Literature 1rbl |
Chain | Residue | Details |
D | LYS175 | |
D | HIS294 | |
D | LYS177 | |
D | ASP203 | |
D | HIS327 |
site_id | CSA5 |
Number of Residues | 5 |
Details | Annotated By Reference To The Literature 1rbl |
Chain | Residue | Details |
E | LYS175 | |
E | HIS294 | |
E | LYS177 | |
E | ASP203 | |
E | HIS327 |
site_id | CSA6 |
Number of Residues | 5 |
Details | Annotated By Reference To The Literature 1rbl |
Chain | Residue | Details |
F | LYS175 | |
F | HIS294 | |
F | LYS177 | |
F | ASP203 | |
F | HIS327 |
site_id | CSA7 |
Number of Residues | 5 |
Details | Annotated By Reference To The Literature 1rbl |
Chain | Residue | Details |
G | LYS175 | |
G | HIS294 | |
G | LYS177 | |
G | ASP203 | |
G | HIS327 |
site_id | CSA8 |
Number of Residues | 5 |
Details | Annotated By Reference To The Literature 1rbl |
Chain | Residue | Details |
H | LYS175 | |
H | HIS294 | |
H | LYS177 | |
H | ASP203 | |
H | HIS327 |
site_id | CSA9 |
Number of Residues | 5 |
Details | Annotated By Reference To The Literature 1rbl |
Chain | Residue | Details |
S | LYS175 | |
S | HIS294 | |
S | LYS177 | |
S | ASP203 | |
S | HIS327 |