1IKI
COMPLEX OF STREPTOMYCES R61 DD-PEPTIDASE WITH THE PRODUCTS OF A SPECIFIC PEPTIDOGLYCAN SUBSTRATE FRAGMENT
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0004180 | molecular_function | carboxypeptidase activity |
| A | 0005576 | cellular_component | extracellular region |
| A | 0006508 | biological_process | proteolysis |
| A | 0008233 | molecular_function | peptidase activity |
| A | 0008360 | biological_process | regulation of cell shape |
| A | 0009002 | molecular_function | serine-type D-Ala-D-Ala carboxypeptidase activity |
| A | 0009252 | biological_process | peptidoglycan biosynthetic process |
| A | 0016787 | molecular_function | hydrolase activity |
| A | 0071555 | biological_process | cell wall organization |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 23 |
| Details | BINDING SITE FOR RESIDUE REY A 400 |
| Chain | Residue |
| A | GLY61 |
| A | TRP233 |
| A | ALA234 |
| A | ALA237 |
| A | GLY238 |
| A | THR301 |
| A | GLN303 |
| A | SER326 |
| A | ASN327 |
| A | HOH1023 |
| A | HOH1057 |
| A | SER62 |
| A | HOH1135 |
| A | HOH1481 |
| A | HOH1590 |
| A | HOH1591 |
| A | LYS65 |
| A | ARG99 |
| A | PHE120 |
| A | THR123 |
| A | TYR159 |
| A | ASN161 |
| A | LEU214 |
| site_id | AC2 |
| Number of Residues | 10 |
| Details | BINDING SITE FOR RESIDUE DAL A 500 |
| Chain | Residue |
| A | SER62 |
| A | TYR159 |
| A | ARG285 |
| A | HIS298 |
| A | THR299 |
| A | GLY300 |
| A | THR301 |
| A | HOH1214 |
| A | HOH1343 |
| A | HOH1590 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 1 |
| Details | Active site: {"description":"Acyl-ester intermediate","evidences":[{"source":"PubMed","id":"12215418","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"12564922","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"15581896","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 9 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"12215418","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"12564922","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"15581896","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
Catalytic Information from CSA
| site_id | CSA1 |
| Number of Residues | 5 |
| Details | Annotated By Reference To The Literature 1ei5 |
| Chain | Residue | Details |
| A | HIS298 | |
| A | SER62 | |
| A | ASN161 | |
| A | LYS65 | |
| A | TYR159 |
