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1I6M

1.7 HIGH RESOLUTION EXPERIMENTAL PHASES FOR TRYPTOPHANYL-TRNA SYNTHETASE COMPLEXED WITH TRYPTOPHANYL-5'AMP

Functional Information from GO Data
ChainGOidnamespacecontents
A0000166molecular_functionnucleotide binding
A0004812molecular_functionaminoacyl-tRNA ligase activity
A0004830molecular_functiontryptophan-tRNA ligase activity
A0005524molecular_functionATP binding
A0005737cellular_componentcytoplasm
A0005829cellular_componentcytosol
A0006412biological_processtranslation
A0006418biological_processtRNA aminoacylation for protein translation
A0006436biological_processtryptophanyl-tRNA aminoacylation
A0016874molecular_functionligase activity
Functional Information from PDB Data
site_idAC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 A 360
ChainResidue
AARG160
ALYS163
AHOH443
AHOH550
AHOH592

site_idAC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 A 361
ChainResidue
ATHR222
ATYR265
ALYS269
AHOH690

site_idAC3
Number of Residues2
DetailsBINDING SITE FOR RESIDUE SO4 A 362
ChainResidue
AARG316
AHOH673

site_idAC4
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 A 363
ChainResidue
AGLY264
ATYR265
AGLY266
AHOH529

site_idAC5
Number of Residues6
DetailsBINDING SITE FOR RESIDUE SO4 A 364
ChainResidue
AARG182
AMET184
ATHR190
ALYS232
AHOH498
AHOH518

site_idAC6
Number of Residues7
DetailsBINDING SITE FOR RESIDUE SO4 A 365
ChainResidue
ALYS178
AGLY180
AALA181
AARG182
ATYR230
AASN243
AHOH506

site_idAC7
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 A 366
ChainResidue
AARG60
ATYR287
AMET291
AHOH539

site_idAC8
Number of Residues5
DetailsBINDING SITE FOR RESIDUE NH4 A 400
ChainResidue
AGLN30
ATYR33
AGLN74
AGOL370
AHOH570

site_idAC9
Number of Residues31
DetailsBINDING SITE FOR RESIDUE TYM A 350
ChainResidue
APHE5
ASER6
AGLY7
AILE8
AGLN9
AGLY17
AASN18
AGLY21
AALA22
AVAL40
AHIS43
ATYR125
AMET129
AASP132
AILE133
AVAL141
AVAL143
AGLY144
AASP146
AGLN147
AGLY180
AALA181
AARG182
AILE183
ALYS192
AMET193
ALYS195
AHOH402
AHOH408
AHOH561
AHOH593

site_idBC1
Number of Residues10
DetailsBINDING SITE FOR RESIDUE GOL A 370
ChainResidue
AASN34
ACYS35
ATYR36
AGLN74
ATHR76
ALYS215
ALYS306
ANH4400
AHOH477
AHOH570

site_idBC2
Number of Residues8
DetailsBINDING SITE FOR RESIDUE GOL A 371
ChainResidue
AGLY12
AVAL13
AILE14
AARG60
ATHR205
ALEU207
AHOH706
AHOH714

site_idBC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE GOL A 372
ChainResidue
ALYS211
ALYS215
ALYS306
AARG309

site_idBC4
Number of Residues5
DetailsBINDING SITE FOR RESIDUE GOL A 373
ChainResidue
ALYS192
ASER194
ALYS195
ASER196
AHOH593

Functional Information from PROSITE/UniProt
site_idPS00178
Number of Residues10
DetailsAA_TRNA_LIGASE_I Aminoacyl-transfer RNA synthetases class-I signature. P..SGvITIGNY
ChainResidueDetails
APRO10-TYR19

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues6
DetailsBINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_00140, ECO:0000269|PubMed:26555258, ECO:0007744|PDB:5DK4
ChainResidueDetails
AGLN9
AGLY17
AASP132
AGLY144
AILE183
ALYS192

Catalytic Information from CSA
site_idCSA1
Number of Residues2
DetailsAnnotated By Reference To The Literature 1d2r
ChainResidueDetails
ALYS192
ALYS195

site_idMCSA1
Number of Residues3
DetailsM-CSA 481
ChainResidueDetails
ALYS111electrostatic stabiliser
ALYS192electrostatic stabiliser
ALYS195electrostatic stabiliser

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PDB entries from 2025-06-25

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