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1HJ5

Cytochrome cd1 Nitrite Reductase, reoxidised enzyme

Functional Information from GO Data
ChainGOidnamespacecontents
A0009055molecular_functionelectron transfer activity
A0016491molecular_functionoxidoreductase activity
A0020037molecular_functionheme binding
A0042597cellular_componentperiplasmic space
A0046872molecular_functionmetal ion binding
A0050418molecular_functionhydroxylamine reductase activity
A0050421molecular_functionnitrite reductase (NO-forming) activity
B0009055molecular_functionelectron transfer activity
B0016491molecular_functionoxidoreductase activity
B0020037molecular_functionheme binding
B0042597cellular_componentperiplasmic space
B0046872molecular_functionmetal ion binding
B0050418molecular_functionhydroxylamine reductase activity
B0050421molecular_functionnitrite reductase (NO-forming) activity
Functional Information from PDB Data
site_idAC1
Number of Residues3
DetailsBINDING SITE FOR RESIDUE SO4 A 621
ChainResidue
AASP290
AGLN292
BMET139

site_idAC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE SO4 A 622
ChainResidue
AASN31
AGLN35
ALYS237
ASER240
AHOH2439
AHOH2440

site_idAC3
Number of Residues7
DetailsBINDING SITE FOR RESIDUE SO4 B 622
ChainResidue
BASN31
BGLN35
BLYS237
BSER240
BHOH2446
BHOH2447
BHOH2448

site_idAC4
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 B 623
ChainResidue
BTYR308
BARG354
BLYS372
BHOH2449
BHOH2450

site_idAC5
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 B 624
ChainResidue
BGLY439
BGLY440
BASN461
BHOH2363
BHOH2451

site_idAC6
Number of Residues16
DetailsBINDING SITE FOR RESIDUE HEC A 601
ChainResidue
AHIS17
AASN23
AARG64
ACYS65
ACYS68
AHIS69
AGLY78
ALYS79
ALEU81
ALEU89
ATYR93
ALEU94
APHE97
ASER102
APRO103
AGOL611

site_idAC7
Number of Residues32
DetailsBINDING SITE FOR RESIDUE DHE A 602
ChainResidue
ATYR25
APRO27
ASER28
AMET106
ATRP109
AARG174
AHIS200
AILE201
AARG203
AARG216
AARG243
ASER244
AILE245
ATYR263
AALA302
AILE303
AHIS345
AARG391
APHE444
AGLN507
ATRP522
ATHR554
AGLY555
APHE557
AHOH2009
AHOH2163
AHOH2164
AHOH2167
AHOH2176
AHOH2235
AHOH2434
AHOH2435

site_idAC8
Number of Residues16
DetailsBINDING SITE FOR RESIDUE HEC B 601
ChainResidue
BHIS17
BASN23
BARG64
BCYS65
BCYS68
BHIS69
BGLY78
BLYS79
BLEU81
BLEU89
BTYR93
BPHE97
BSER102
BPRO103
BGOL611
BHOH2054

site_idAC9
Number of Residues31
DetailsBINDING SITE FOR RESIDUE DHE B 602
ChainResidue
BARG216
BARG243
BSER244
BTYR263
BALA302
BILE303
BHIS345
BARG391
BPHE444
BGLN507
BTRP522
BTHR554
BGLY555
BPHE557
BHOH2008
BHOH2009
BHOH2172
BHOH2441
BHOH2442
BHOH2443
BHOH2444
BHOH2445
BTYR25
BPRO27
BSER28
BMET106
BTRP109
BARG174
BHIS200
BILE201
BARG203

site_idBC1
Number of Residues11
DetailsBINDING SITE FOR RESIDUE GOL A 611
ChainResidue
AASN23
AARG24
AGLU26
APRO27
AGLU63
AARG64
AALA104
AGLY105
AHEC601
AHOH2043
AHOH2436

site_idBC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE GOL A 612
ChainResidue
AVAL396
AHIS397
APRO398
AGLY401
AHIS424

site_idBC3
Number of Residues7
DetailsBINDING SITE FOR RESIDUE GOL A 613
ChainResidue
APHE395
AVAL396
APRO449
ASER451
AILE475
AHOH2337
AHOH2437

site_idBC4
Number of Residues12
DetailsBINDING SITE FOR RESIDUE GOL B 611
ChainResidue
BASN23
BARG24
BGLU26
BPRO27
BGLU63
BARG64
BALA104
BGLY105
BTHR111
BHEC601
BHOH2047
BHOH2076

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues8
DetailsBINDING: axial binding residue => ECO:0000269|PubMed:7736589, ECO:0007744|PDB:1QKS
ChainResidueDetails
AHIS17
ATYR25
AHIS69
AHIS200
BHIS17
BTYR25
BHIS69
BHIS200

site_idSWS_FT_FI2
Number of Residues24
DetailsBINDING: BINDING => ECO:0000269|PubMed:7736589, ECO:0007744|PDB:1QKS
ChainResidueDetails
ASER28
AARG391
AGLN507
ATHR554
BSER28
BLYS79
BTYR93
BTRP109
BARG174
BARG203
BARG216
ALYS79
BARG243
BTYR263
BARG391
BGLN507
BTHR554
ATYR93
ATRP109
AARG174
AARG203
AARG216
AARG243
ATYR263

site_idSWS_FT_FI3
Number of Residues4
DetailsBINDING: covalent => ECO:0000269|PubMed:7736589, ECO:0007744|PDB:1QKS
ChainResidueDetails
ACYS65
ACYS68
BCYS65
BCYS68

Catalytic Information from CSA
site_idCSA1
Number of Residues2
DetailsAnnotated By Reference To The Literature 1nir
ChainResidueDetails
AHIS388
AHIS345

site_idCSA2
Number of Residues2
DetailsAnnotated By Reference To The Literature 1nir
ChainResidueDetails
BHIS388
BHIS345

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PDB entries from 2024-06-26

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