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1H8E

(ADP.AlF4)2(ADP.SO4) bovine F1-ATPase (all three catalytic sites occupied)

Functional Information from GO Data
ChainGOidnamespacecontents
A0000166molecular_functionnucleotide binding
A0005515molecular_functionprotein binding
A0005524molecular_functionATP binding
A0005739cellular_componentmitochondrion
A0005743cellular_componentmitochondrial inner membrane
A0005886cellular_componentplasma membrane
A0006754biological_processATP biosynthetic process
A0006811biological_processmonoatomic ion transport
A0015986biological_processproton motive force-driven ATP synthesis
A0032559molecular_functionadenyl ribonucleotide binding
A0043531molecular_functionADP binding
A0045259cellular_componentproton-transporting ATP synthase complex
A0046034biological_processATP metabolic process
A0046872molecular_functionmetal ion binding
A0046933molecular_functionproton-transporting ATP synthase activity, rotational mechanism
A1902600biological_processproton transmembrane transport
B0000166molecular_functionnucleotide binding
B0005515molecular_functionprotein binding
B0005524molecular_functionATP binding
B0005739cellular_componentmitochondrion
B0005743cellular_componentmitochondrial inner membrane
B0005886cellular_componentplasma membrane
B0006754biological_processATP biosynthetic process
B0006811biological_processmonoatomic ion transport
B0015986biological_processproton motive force-driven ATP synthesis
B0032559molecular_functionadenyl ribonucleotide binding
B0043531molecular_functionADP binding
B0045259cellular_componentproton-transporting ATP synthase complex
B0046034biological_processATP metabolic process
B0046872molecular_functionmetal ion binding
B0046933molecular_functionproton-transporting ATP synthase activity, rotational mechanism
B1902600biological_processproton transmembrane transport
C0000166molecular_functionnucleotide binding
C0005515molecular_functionprotein binding
C0005524molecular_functionATP binding
C0005739cellular_componentmitochondrion
C0005743cellular_componentmitochondrial inner membrane
C0005886cellular_componentplasma membrane
C0006754biological_processATP biosynthetic process
C0006811biological_processmonoatomic ion transport
C0015986biological_processproton motive force-driven ATP synthesis
C0032559molecular_functionadenyl ribonucleotide binding
C0043531molecular_functionADP binding
C0045259cellular_componentproton-transporting ATP synthase complex
C0046034biological_processATP metabolic process
C0046872molecular_functionmetal ion binding
C0046933molecular_functionproton-transporting ATP synthase activity, rotational mechanism
C1902600biological_processproton transmembrane transport
D0000166molecular_functionnucleotide binding
D0005515molecular_functionprotein binding
D0005524molecular_functionATP binding
D0005737cellular_componentcytoplasm
D0005739cellular_componentmitochondrion
D0005743cellular_componentmitochondrial inner membrane
D0006754biological_processATP biosynthetic process
D0006811biological_processmonoatomic ion transport
D0015986biological_processproton motive force-driven ATP synthesis
D0016887molecular_functionATP hydrolysis activity
D0042776biological_processproton motive force-driven mitochondrial ATP synthesis
D0045259cellular_componentproton-transporting ATP synthase complex
D0046034biological_processATP metabolic process
D0046872molecular_functionmetal ion binding
D0046933molecular_functionproton-transporting ATP synthase activity, rotational mechanism
D1902600biological_processproton transmembrane transport
E0000166molecular_functionnucleotide binding
E0005515molecular_functionprotein binding
E0005524molecular_functionATP binding
E0005737cellular_componentcytoplasm
E0005739cellular_componentmitochondrion
E0005743cellular_componentmitochondrial inner membrane
E0006754biological_processATP biosynthetic process
E0006811biological_processmonoatomic ion transport
E0015986biological_processproton motive force-driven ATP synthesis
E0016887molecular_functionATP hydrolysis activity
E0042776biological_processproton motive force-driven mitochondrial ATP synthesis
E0045259cellular_componentproton-transporting ATP synthase complex
E0046034biological_processATP metabolic process
E0046872molecular_functionmetal ion binding
E0046933molecular_functionproton-transporting ATP synthase activity, rotational mechanism
E1902600biological_processproton transmembrane transport
F0000166molecular_functionnucleotide binding
F0005515molecular_functionprotein binding
F0005524molecular_functionATP binding
F0005737cellular_componentcytoplasm
F0005739cellular_componentmitochondrion
F0005743cellular_componentmitochondrial inner membrane
F0006754biological_processATP biosynthetic process
F0006811biological_processmonoatomic ion transport
F0015986biological_processproton motive force-driven ATP synthesis
F0016887molecular_functionATP hydrolysis activity
F0042776biological_processproton motive force-driven mitochondrial ATP synthesis
F0045259cellular_componentproton-transporting ATP synthase complex
F0046034biological_processATP metabolic process
F0046872molecular_functionmetal ion binding
F0046933molecular_functionproton-transporting ATP synthase activity, rotational mechanism
F1902600biological_processproton transmembrane transport
G0005515molecular_functionprotein binding
G0005739cellular_componentmitochondrion
G0005743cellular_componentmitochondrial inner membrane
G0006754biological_processATP biosynthetic process
G0006811biological_processmonoatomic ion transport
G0015986biological_processproton motive force-driven ATP synthesis
G0042776biological_processproton motive force-driven mitochondrial ATP synthesis
G0045259cellular_componentproton-transporting ATP synthase complex
G0046933molecular_functionproton-transporting ATP synthase activity, rotational mechanism
G1902600biological_processproton transmembrane transport
H0015986biological_processproton motive force-driven ATP synthesis
H0045259cellular_componentproton-transporting ATP synthase complex
H0046933molecular_functionproton-transporting ATP synthase activity, rotational mechanism
I0005739cellular_componentmitochondrion
I0005743cellular_componentmitochondrial inner membrane
I0006754biological_processATP biosynthetic process
I0006811biological_processmonoatomic ion transport
I0015986biological_processproton motive force-driven ATP synthesis
I0042776biological_processproton motive force-driven mitochondrial ATP synthesis
I0045259cellular_componentproton-transporting ATP synthase complex
I0046933molecular_functionproton-transporting ATP synthase activity, rotational mechanism
I1902600biological_processproton transmembrane transport
Functional Information from PDB Data
site_idAC1
Number of Residues16
DetailsBINDING SITE FOR RESIDUE ADP A 600
ChainResidue
AGLN172
AMG601
AHOH2302
AHOH2304
AHOH2305
AHOH2306
DTYR368
DHOH2248
ATHR173
AGLY174
ALYS175
ATHR176
ASER177
APHE357
AGLN430
AGLN432

site_idAC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG A 601
ChainResidue
ATHR176
AADP600
AHOH2102
AHOH2148
AHOH2304
AHOH2305

site_idAC3
Number of Residues9
DetailsBINDING SITE FOR RESIDUE GOL A 602
ChainResidue
ATYR244
ALEU245
ATYR248
AARG304
AHOH2026
AHOH2307
AHOH2308
AHOH2309
AHOH2310

site_idAC4
Number of Residues8
DetailsBINDING SITE FOR RESIDUE GOL B 602
ChainResidue
BVAL129
BGLY130
BTYR244
BTYR248
BARG304
BHOH2015
BHOH2177
BHOH2240

site_idAC5
Number of Residues17
DetailsBINDING SITE FOR RESIDUE ADP B 600
ChainResidue
BGLN172
BTHR173
BGLY174
BLYS175
BTHR176
BSER177
BPHE357
BGLN430
BGLN432
BMG601
BHOH2134
BHOH2234
BHOH2235
BHOH2236
BHOH2237
BHOH2238
BHOH2239

site_idAC6
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 601
ChainResidue
BTHR176
BADP600
BHOH2098
BHOH2134
BHOH2238
BHOH2239

site_idAC7
Number of Residues8
DetailsBINDING SITE FOR RESIDUE GOL B 602
ChainResidue
BVAL129
BGLY130
BTYR244
BTYR248
BARG304
BHOH2015
BHOH2177
BHOH2240

site_idAC8
Number of Residues7
DetailsBINDING SITE FOR RESIDUE GOL B 700
ChainResidue
BGLN349
BHOH2241
FALA158
FGLY159
FARG337
FGLU341
FHOH2123

site_idAC9
Number of Residues22
DetailsBINDING SITE FOR RESIDUE ADP C 600
ChainResidue
CGLN172
CTHR173
CGLY174
CLYS175
CTHR176
CSER177
CPHE357
CARG362
CGLN430
CGLN432
CMG601
CHOH2118
CHOH2121
CHOH2162
CHOH2312
CHOH2313
CHOH2314
CHOH2315
CHOH2316
CHOH2317
FHOH2234
FHOH2239

site_idBC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG C 601
ChainResidue
CTHR176
CADP600
CHOH2123
CHOH2162
CHOH2316
CHOH2317

site_idBC2
Number of Residues11
DetailsBINDING SITE FOR RESIDUE GOL C 602
ChainResidue
CMET62
CVAL129
CGLY130
CTYR244
CTYR248
CARG304
CHOH2318
CHOH2319
CHOH2320
CHOH2321
CHOH2322

site_idBC3
Number of Residues21
DetailsBINDING SITE FOR RESIDUE ADP D 600
ChainResidue
CSER372
CARG373
DGLY159
DVAL160
DGLY161
DLYS162
DTHR163
DVAL164
DTYR345
DPHE418
DALA421
DPHE424
DTHR425
DMG601
DALF620
DHOH2125
DHOH2155
DHOH2307
DHOH2308
DHOH2309
DHOH2310

site_idBC4
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG D 601
ChainResidue
DTHR163
DADP600
DALF620
DHOH2122
DHOH2125
DHOH2155

site_idBC5
Number of Residues14
DetailsBINDING SITE FOR RESIDUE ALF D 620
ChainResidue
CSER344
CARG373
DALA158
DGLY159
DLYS162
DGLU188
DARG189
DTYR311
DADP600
DMG601
DHOH2120
DHOH2121
DHOH2122
DHOH2155

site_idBC6
Number of Residues17
DetailsBINDING SITE FOR RESIDUE ADP E 600
ChainResidue
AARG373
AHOH2232
EGLY159
EVAL160
EGLY161
ELYS162
ETHR163
EVAL164
ETYR345
EALA421
EMG601
ESO4630
EHOH2174
EHOH2175
EHOH2177
EHOH2178
EHOH2180

site_idBC7
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG E 601
ChainResidue
ETHR163
EADP600
EHOH2085
EHOH2106
EHOH2177
EHOH2180

site_idBC8
Number of Residues12
DetailsBINDING SITE FOR RESIDUE SO4 E 630
ChainResidue
AARG373
EALA158
ELYS162
EARG189
EARG260
ETYR311
EADP600
EHOH2069
EHOH2108
EHOH2179
EHOH2180
EHOH2181

site_idBC9
Number of Residues20
DetailsBINDING SITE FOR RESIDUE ADP F 600
ChainResidue
BVAL371
BARG373
FGLY159
FVAL160
FGLY161
FLYS162
FTHR163
FVAL164
FTYR345
FPHE418
FALA421
FPHE424
FMG601
FALF620
FHOH2134
FHOH2256
FHOH2282
FHOH2283
FHOH2284
FHOH2285

site_idCC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG F 601
ChainResidue
FTHR163
FADP600
FALF620
FHOH2129
FHOH2134
FHOH2164

site_idCC2
Number of Residues15
DetailsBINDING SITE FOR RESIDUE ALF F 620
ChainResidue
BSER344
BARG373
FALA158
FGLY159
FLYS162
FGLU188
FARG189
FTYR311
FADP600
FMG601
FHOH2128
FHOH2129
FHOH2130
FHOH2134
FHOH2164

Functional Information from PROSITE/UniProt
site_idPS00152
Number of Residues10
DetailsATPASE_ALPHA_BETA ATP synthase alpha and beta subunits signature. PAINVGLSVS
ChainResidueDetails
APRO363-SER372
DPRO346-SER355

site_idPS00153
Number of Residues14
DetailsATPASE_GAMMA ATP synthase gamma subunit signature. ITkEliEiisGAaA
ChainResidueDetails
GILE258-ALA271

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues24
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"17895376","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"8065448","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"8790345","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"9687365","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1BMF","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1COW","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1E1Q","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1E1R","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1E79","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1EFR","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1H8H","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1NBM","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1OHH","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2CK3","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2JDI","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2JIZ","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2JJ1","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2JJ2","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2V7Q","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2WSS","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2XND","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4TSF","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4TT3","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4YXW","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4Z1M","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues3
DetailsSite: {"description":"Required for activity","evidences":[{"evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues8
DetailsModified residue: {"description":"Phosphoserine","evidences":[{"source":"UniProtKB","id":"P25705","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues3
DetailsModified residue: {"description":"Phosphoserine; alternate","evidences":[{"source":"UniProtKB","id":"P25705","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues3
DetailsModified residue: {"description":"Phosphoserine","evidences":[{"source":"UniProtKB","id":"Q03265","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI6
Number of Residues15
DetailsModified residue: {"description":"N6-acetyllysine","evidences":[{"source":"UniProtKB","id":"Q03265","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI7
Number of Residues3
DetailsModified residue: {"description":"Phosphothreonine","evidences":[{"source":"UniProtKB","id":"P15999","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI8
Number of Residues33
DetailsModified residue: {"description":"N6-succinyllysine; alternate","evidences":[{"source":"UniProtKB","id":"Q03265","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI9
Number of Residues3
DetailsModified residue: {"description":"Omega-N-methylarginine","evidences":[{"source":"UniProtKB","id":"Q03265","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI10
Number of Residues3
DetailsModified residue: {"description":"N6-acetyllysine","evidences":[{"source":"UniProtKB","id":"P25705","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI11
Number of Residues3
DetailsGlycosylation: {"description":"O-linked (GlcNAc) serine; alternate","evidences":[{"evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI12
Number of Residues15
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"17895376","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"9687365","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1NBM","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2V7Q","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI13
Number of Residues6
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"9687365","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1NBM","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI14
Number of Residues3
DetailsBinding site: {"evidences":[{"source":"PDB","id":"1E1R","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1H8E","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4ASU","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4TSF","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI15
Number of Residues14
DetailsModified residue: {"description":"N6-succinyllysine; alternate","evidences":[{"source":"UniProtKB","id":"P56480","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI16
Number of Residues6
DetailsModified residue: {"description":"N6-acetyllysine","evidences":[{"source":"UniProtKB","id":"P06576","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI17
Number of Residues3
DetailsModified residue: {"description":"Phosphothreonine","evidences":[{"source":"UniProtKB","id":"P56480","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI18
Number of Residues3
DetailsModified residue: {"description":"Phosphoserine","evidences":[{"source":"UniProtKB","id":"P06576","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI19
Number of Residues3
DetailsModified residue: {"description":"Phosphoserine","evidences":[{"source":"UniProtKB","id":"P10719","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI20
Number of Residues6
DetailsModified residue: {"description":"N6-acetyllysine","evidences":[{"source":"UniProtKB","id":"P56480","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI21
Number of Residues3
DetailsGlycosylation: {"description":"O-linked (GlcNAc) serine","evidences":[{"evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI22
Number of Residues1
DetailsModified residue: {"description":"N6-acetyllysine","evidences":[{"source":"UniProtKB","id":"Q91VR2","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI23
Number of Residues2
DetailsModified residue: {"description":"N6-succinyllysine","evidences":[{"source":"UniProtKB","id":"Q91VR2","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI24
Number of Residues2
DetailsModified residue: {"description":"N6-acetyllysine","evidences":[{"source":"UniProtKB","id":"P36542","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI25
Number of Residues2
DetailsModified residue: {"description":"N6-succinyllysine; alternate","evidences":[{"source":"UniProtKB","id":"Q91VR2","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI26
Number of Residues1
DetailsModified residue: {"description":"N6-succinyllysine; alternate","evidences":[{"source":"UniProtKB","id":"P56382","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI27
Number of Residues1
DetailsModified residue: {"description":"N6-acetyllysine","evidences":[{"source":"UniProtKB","id":"P56382","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

Catalytic Information from CSA
site_idCSA1
Number of Residues1
DetailsAnnotated By Reference To The Literature 1ohh
ChainResidueDetails
DARG356

site_idCSA2
Number of Residues1
DetailsAnnotated By Reference To The Literature 1ohh
ChainResidueDetails
EARG356

site_idCSA3
Number of Residues1
DetailsAnnotated By Reference To The Literature 1ohh
ChainResidueDetails
FARG356

site_idCSA4
Number of Residues4
DetailsAnnotated By Reference To The Literature 1ohh
ChainResidueDetails
AARG373
DARG189
DGLU188
DLYS162

site_idCSA5
Number of Residues4
DetailsAnnotated By Reference To The Literature 1ohh
ChainResidueDetails
BARG373
EARG189
EGLU188
ELYS162

site_idCSA6
Number of Residues4
DetailsAnnotated By Reference To The Literature 1ohh
ChainResidueDetails
FARG189
FGLU188
FLYS162
CARG373

site_idCSA7
Number of Residues3
DetailsAnnotated By Reference To The Literature 1ohh
ChainResidueDetails
ALYS175
ALYS209
AGLN208

site_idCSA8
Number of Residues3
DetailsAnnotated By Reference To The Literature 1ohh
ChainResidueDetails
BLYS175
BLYS209
BGLN208

site_idCSA9
Number of Residues3
DetailsAnnotated By Reference To The Literature 1ohh
ChainResidueDetails
CLYS175
CLYS209
CGLN208

site_idMCSA1
Number of Residues3
DetailsM-CSA 178
ChainResidueDetails
DLYS162electrostatic stabiliser
DGLU188electrostatic stabiliser
DARG189electrostatic stabiliser

site_idMCSA2
Number of Residues3
DetailsM-CSA 178
ChainResidueDetails
ELYS162electrostatic stabiliser
EGLU188electrostatic stabiliser
EARG189electrostatic stabiliser

site_idMCSA3
Number of Residues3
DetailsM-CSA 178
ChainResidueDetails
FLYS162electrostatic stabiliser
FGLU188electrostatic stabiliser
FARG189electrostatic stabiliser

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PDB entries from 2025-10-29

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