Summary Structural details Experimental details Functional details Sequence Neighbor History Downloads

1H8E

(ADP.AlF4)2(ADP.SO4) bovine F1-ATPase (all three catalytic sites occupied)

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0005515	molecular_function	protein binding
A	0005524	molecular_function	ATP binding
A	0005737	cellular_component	cytoplasm
A	0005739	cellular_component	mitochondrion
A	0005743	cellular_component	mitochondrial inner membrane
A	0005886	cellular_component	plasma membrane
A	0006754	biological_process	ATP biosynthetic process
A	0015986	biological_process	proton motive force-driven ATP synthesis
A	0032559	molecular_function	adenyl ribonucleotide binding
A	0043531	molecular_function	ADP binding
A	0045259	cellular_component	proton-transporting ATP synthase complex
A	0045261	cellular_component	proton-transporting ATP synthase complex, catalytic core F(1)
A	0045267	cellular_component	proton-transporting ATP synthase, catalytic core
A	0046034	biological_process	ATP metabolic process
A	0046933	molecular_function	proton-transporting ATP synthase activity, rotational mechanism
A	1902600	biological_process	proton transmembrane transport
B	0005515	molecular_function	protein binding
B	0005524	molecular_function	ATP binding
B	0005737	cellular_component	cytoplasm
B	0005739	cellular_component	mitochondrion
B	0005743	cellular_component	mitochondrial inner membrane
B	0005886	cellular_component	plasma membrane
B	0006754	biological_process	ATP biosynthetic process
B	0015986	biological_process	proton motive force-driven ATP synthesis
B	0032559	molecular_function	adenyl ribonucleotide binding
B	0043531	molecular_function	ADP binding
B	0045259	cellular_component	proton-transporting ATP synthase complex
B	0045261	cellular_component	proton-transporting ATP synthase complex, catalytic core F(1)
B	0045267	cellular_component	proton-transporting ATP synthase, catalytic core
B	0046034	biological_process	ATP metabolic process
B	0046933	molecular_function	proton-transporting ATP synthase activity, rotational mechanism
B	1902600	biological_process	proton transmembrane transport
C	0005515	molecular_function	protein binding
C	0005524	molecular_function	ATP binding
C	0005737	cellular_component	cytoplasm
C	0005739	cellular_component	mitochondrion
C	0005743	cellular_component	mitochondrial inner membrane
C	0005886	cellular_component	plasma membrane
C	0006754	biological_process	ATP biosynthetic process
C	0015986	biological_process	proton motive force-driven ATP synthesis
C	0032559	molecular_function	adenyl ribonucleotide binding
C	0043531	molecular_function	ADP binding
C	0045259	cellular_component	proton-transporting ATP synthase complex
C	0045261	cellular_component	proton-transporting ATP synthase complex, catalytic core F(1)
C	0045267	cellular_component	proton-transporting ATP synthase, catalytic core
C	0046034	biological_process	ATP metabolic process
C	0046933	molecular_function	proton-transporting ATP synthase activity, rotational mechanism
C	1902600	biological_process	proton transmembrane transport
D	0005515	molecular_function	protein binding
D	0005524	molecular_function	ATP binding
D	0005737	cellular_component	cytoplasm
D	0005739	cellular_component	mitochondrion
D	0005743	cellular_component	mitochondrial inner membrane
D	0006754	biological_process	ATP biosynthetic process
D	0015986	biological_process	proton motive force-driven ATP synthesis
D	0016887	molecular_function	ATP hydrolysis activity
D	0042776	biological_process	proton motive force-driven mitochondrial ATP synthesis
D	0045259	cellular_component	proton-transporting ATP synthase complex
D	0045261	cellular_component	proton-transporting ATP synthase complex, catalytic core F(1)
D	0046034	biological_process	ATP metabolic process
D	0046933	molecular_function	proton-transporting ATP synthase activity, rotational mechanism
D	0046961	molecular_function	proton-transporting ATPase activity, rotational mechanism
D	1902600	biological_process	proton transmembrane transport
E	0005515	molecular_function	protein binding
E	0005524	molecular_function	ATP binding
E	0005737	cellular_component	cytoplasm
E	0005739	cellular_component	mitochondrion
E	0005743	cellular_component	mitochondrial inner membrane
E	0006754	biological_process	ATP biosynthetic process
E	0015986	biological_process	proton motive force-driven ATP synthesis
E	0016887	molecular_function	ATP hydrolysis activity
E	0042776	biological_process	proton motive force-driven mitochondrial ATP synthesis
E	0045259	cellular_component	proton-transporting ATP synthase complex
E	0045261	cellular_component	proton-transporting ATP synthase complex, catalytic core F(1)
E	0046034	biological_process	ATP metabolic process
E	0046933	molecular_function	proton-transporting ATP synthase activity, rotational mechanism
E	0046961	molecular_function	proton-transporting ATPase activity, rotational mechanism
E	1902600	biological_process	proton transmembrane transport
F	0005515	molecular_function	protein binding
F	0005524	molecular_function	ATP binding
F	0005737	cellular_component	cytoplasm
F	0005739	cellular_component	mitochondrion
F	0005743	cellular_component	mitochondrial inner membrane
F	0006754	biological_process	ATP biosynthetic process
F	0015986	biological_process	proton motive force-driven ATP synthesis
F	0016887	molecular_function	ATP hydrolysis activity
F	0042776	biological_process	proton motive force-driven mitochondrial ATP synthesis
F	0045259	cellular_component	proton-transporting ATP synthase complex
F	0045261	cellular_component	proton-transporting ATP synthase complex, catalytic core F(1)
F	0046034	biological_process	ATP metabolic process
F	0046933	molecular_function	proton-transporting ATP synthase activity, rotational mechanism
F	0046961	molecular_function	proton-transporting ATPase activity, rotational mechanism
F	1902600	biological_process	proton transmembrane transport
G	0005515	molecular_function	protein binding
G	0005739	cellular_component	mitochondrion
G	0005743	cellular_component	mitochondrial inner membrane
G	0006754	biological_process	ATP biosynthetic process
G	0015986	biological_process	proton motive force-driven ATP synthesis
G	0045259	cellular_component	proton-transporting ATP synthase complex
G	0045261	cellular_component	proton-transporting ATP synthase complex, catalytic core F(1)
G	0046933	molecular_function	proton-transporting ATP synthase activity, rotational mechanism
G	1902600	biological_process	proton transmembrane transport
H	0015986	biological_process	proton motive force-driven ATP synthesis
H	0045261	cellular_component	proton-transporting ATP synthase complex, catalytic core F(1)
H	0046933	molecular_function	proton-transporting ATP synthase activity, rotational mechanism
I	0005739	cellular_component	mitochondrion
I	0005743	cellular_component	mitochondrial inner membrane
I	0006754	biological_process	ATP biosynthetic process
I	0015986	biological_process	proton motive force-driven ATP synthesis
I	0042776	biological_process	proton motive force-driven mitochondrial ATP synthesis
I	0045259	cellular_component	proton-transporting ATP synthase complex
I	0045261	cellular_component	proton-transporting ATP synthase complex, catalytic core F(1)
I	0046933	molecular_function	proton-transporting ATP synthase activity, rotational mechanism
I	1902600	biological_process	proton transmembrane transport

Functional Information from PDB Data

site_id	AC1
Number of Residues	16
Details	BINDING SITE FOR RESIDUE ADP A 600

Chain	Residue
A	GLN172
A	MG601
A	HOH2302
A	HOH2304
A	HOH2305
A	HOH2306
D	TYR368
D	HOH2248
A	THR173
A	GLY174
A	LYS175
A	THR176
A	SER177
A	PHE357
A	GLN430
A	GLN432

site_id	AC2
Number of Residues	6
Details	BINDING SITE FOR RESIDUE MG A 601

Chain	Residue
A	THR176
A	ADP600
A	HOH2102
A	HOH2148
A	HOH2304
A	HOH2305

site_id	AC3
Number of Residues	9
Details	BINDING SITE FOR RESIDUE GOL A 602

Chain	Residue
A	TYR244
A	LEU245
A	TYR248
A	ARG304
A	HOH2026
A	HOH2307
A	HOH2308
A	HOH2309
A	HOH2310

site_id	AC4
Number of Residues	8
Details	BINDING SITE FOR RESIDUE GOL B 602

Chain	Residue
B	VAL129
B	GLY130
B	TYR244
B	TYR248
B	ARG304
B	HOH2015
B	HOH2177
B	HOH2240

site_id	AC5
Number of Residues	17
Details	BINDING SITE FOR RESIDUE ADP B 600

Chain	Residue
B	GLN172
B	THR173
B	GLY174
B	LYS175
B	THR176
B	SER177
B	PHE357
B	GLN430
B	GLN432
B	MG601
B	HOH2134
B	HOH2234
B	HOH2235
B	HOH2236
B	HOH2237
B	HOH2238
B	HOH2239

site_id	AC6
Number of Residues	6
Details	BINDING SITE FOR RESIDUE MG B 601

Chain	Residue
B	THR176
B	ADP600
B	HOH2098
B	HOH2134
B	HOH2238
B	HOH2239

site_id	AC7
Number of Residues	8
Details	BINDING SITE FOR RESIDUE GOL B 602

Chain	Residue
B	VAL129
B	GLY130
B	TYR244
B	TYR248
B	ARG304
B	HOH2015
B	HOH2177
B	HOH2240

site_id	AC8
Number of Residues	7
Details	BINDING SITE FOR RESIDUE GOL B 700

Chain	Residue
B	GLN349
B	HOH2241
F	ALA158
F	GLY159
F	ARG337
F	GLU341
F	HOH2123

site_id	AC9
Number of Residues	22
Details	BINDING SITE FOR RESIDUE ADP C 600

Chain	Residue
C	GLN172
C	THR173
C	GLY174
C	LYS175
C	THR176
C	SER177
C	PHE357
C	ARG362
C	GLN430
C	GLN432
C	MG601
C	HOH2118
C	HOH2121
C	HOH2162
C	HOH2312
C	HOH2313
C	HOH2314
C	HOH2315
C	HOH2316
C	HOH2317
F	HOH2234
F	HOH2239

site_id	BC1
Number of Residues	6
Details	BINDING SITE FOR RESIDUE MG C 601

Chain	Residue
C	THR176
C	ADP600
C	HOH2123
C	HOH2162
C	HOH2316
C	HOH2317

site_id	BC2
Number of Residues	11
Details	BINDING SITE FOR RESIDUE GOL C 602

Chain	Residue
C	MET62
C	VAL129
C	GLY130
C	TYR244
C	TYR248
C	ARG304
C	HOH2318
C	HOH2319
C	HOH2320
C	HOH2321
C	HOH2322

site_id	BC3
Number of Residues	21
Details	BINDING SITE FOR RESIDUE ADP D 600

Chain	Residue
C	SER372
C	ARG373
D	GLY159
D	VAL160
D	GLY161
D	LYS162
D	THR163
D	VAL164
D	TYR345
D	PHE418
D	ALA421
D	PHE424
D	THR425
D	MG601
D	ALF620
D	HOH2125
D	HOH2155
D	HOH2307
D	HOH2308
D	HOH2309
D	HOH2310

site_id	BC4
Number of Residues	6
Details	BINDING SITE FOR RESIDUE MG D 601

Chain	Residue
D	THR163
D	ADP600
D	ALF620
D	HOH2122
D	HOH2125
D	HOH2155

site_id	BC5
Number of Residues	14
Details	BINDING SITE FOR RESIDUE ALF D 620

Chain	Residue
C	SER344
C	ARG373
D	ALA158
D	GLY159
D	LYS162
D	GLU188
D	ARG189
D	TYR311
D	ADP600
D	MG601
D	HOH2120
D	HOH2121
D	HOH2122
D	HOH2155

site_id	BC6
Number of Residues	17
Details	BINDING SITE FOR RESIDUE ADP E 600

Chain	Residue
A	ARG373
A	HOH2232
E	GLY159
E	VAL160
E	GLY161
E	LYS162
E	THR163
E	VAL164
E	TYR345
E	ALA421
E	MG601
E	SO4630
E	HOH2174
E	HOH2175
E	HOH2177
E	HOH2178
E	HOH2180

site_id	BC7
Number of Residues	6
Details	BINDING SITE FOR RESIDUE MG E 601

Chain	Residue
E	THR163
E	ADP600
E	HOH2085
E	HOH2106
E	HOH2177
E	HOH2180

site_id	BC8
Number of Residues	12
Details	BINDING SITE FOR RESIDUE SO4 E 630

Chain	Residue
A	ARG373
E	ALA158
E	LYS162
E	ARG189
E	ARG260
E	TYR311
E	ADP600
E	HOH2069
E	HOH2108
E	HOH2179
E	HOH2180
E	HOH2181

site_id	BC9
Number of Residues	20
Details	BINDING SITE FOR RESIDUE ADP F 600

Chain	Residue
B	VAL371
B	ARG373
F	GLY159
F	VAL160
F	GLY161
F	LYS162
F	THR163
F	VAL164
F	TYR345
F	PHE418
F	ALA421
F	PHE424
F	MG601
F	ALF620
F	HOH2134
F	HOH2256
F	HOH2282
F	HOH2283
F	HOH2284
F	HOH2285

site_id	CC1
Number of Residues	6
Details	BINDING SITE FOR RESIDUE MG F 601

Chain	Residue
F	THR163
F	ADP600
F	ALF620
F	HOH2129
F	HOH2134
F	HOH2164

site_id	CC2
Number of Residues	15
Details	BINDING SITE FOR RESIDUE ALF F 620

Chain	Residue
B	SER344
B	ARG373
F	ALA158
F	GLY159
F	LYS162
F	GLU188
F	ARG189
F	TYR311
F	ADP600
F	MG601
F	HOH2128
F	HOH2129
F	HOH2130
F	HOH2134
F	HOH2164

Functional Information from PROSITE/UniProt

site_id	PS00152
Number of Residues	10
Details	ATPASE_ALPHA_BETA ATP synthase alpha and beta subunits signature. PAINVGLSVS

Chain	Residue	Details
A	PRO363-SER372
D	PRO346-SER355

site_id	PS00153
Number of Residues	14
Details	ATPASE_GAMMA ATP synthase gamma subunit signature. ITkEliEiisGAaA

Chain	Residue	Details
G	ILE258-ALA271

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	3
Details	MOD_RES: N6-succinyllysine; alternate => ECO:0000250\|UniProtKB:P56382

Chain	Residue	Details
I	ALA21
I	ALA32
I	THR37
B	GLN430
C	ASP170
C	GLN430

site_id	SWS_FT_FI2
Number of Residues	1
Details	MOD_RES: N6-acetyllysine => ECO:0000250\|UniProtKB:P56382

Chain	Residue	Details
I	ILE44
G	LYS245
F	ARG189

site_id	SWS_FT_FI3
Number of Residues	2
Details	MOD_RES: N6-acetyllysine => ECO:0000250\|UniProtKB:P36542

Chain	Residue	Details
G	LYS30
E	LYS472
F	LYS74
F	LYS111
F	LYS209
F	LYS214
F	LYS472
G	LYS172
D	LYS209
D	LYS214
D	LYS472
E	LYS74
E	LYS111
E	LYS209
E	LYS214

site_id	SWS_FT_FI4
Number of Residues	2
Details	MOD_RES: N6-succinyllysine; alternate => ECO:0000250\|UniProtKB:Q91VR2

Chain	Residue	Details
G	LYS90
C	SER22
C	SER123
C	SER141
G	LYS129
E	LYS148
E	LYS376
F	LYS148
F	LYS376
B	SER123
B	SER141
C	SER10

site_id	SWS_FT_FI5
Number of Residues	1
Details	MOD_RES: Phosphoserine => ECO:0000250\|UniProtKB:P36542

Chain	Residue	Details
G	SER121
E	THR262
F	THR262

site_id	SWS_FT_FI6
Number of Residues	3
Details	MOD_RES: Phosphoserine => ECO:0000250\|UniProtKB:P06576

Chain	Residue	Details
D	SER365
E	SER365
F	SER365

site_id	SWS_FT_FI7
Number of Residues	3
Details	MOD_RES: Phosphoserine => ECO:0000250\|UniProtKB:P10719

Chain	Residue	Details
D	SER383
B	LYS498
C	LYS80
C	LYS83
C	LYS89
C	LYS197
C	LYS498
E	SER383
F	SER383
A	LYS197
A	LYS498
B	LYS80
B	LYS83
B	LYS89
B	LYS197

site_id	SWS_FT_FI8
Number of Residues	6
Details	MOD_RES: N6-acetyllysine => ECO:0000250\|UniProtKB:P56480

Chain	Residue	Details
D	LYS430
D	LYS435
E	LYS430
E	LYS435
F	LYS430
F	LYS435

site_id	SWS_FT_FI9
Number of Residues	3
Details	CARBOHYD: O-linked (GlcNAc) serine => ECO:0000250

Chain	Residue	Details
D	SER56
A	LYS488
A	LYS496
B	LYS118
B	LYS124
B	LYS187
B	LYS196
B	LYS218
B	LYS262
B	LYS384
B	LYS455
E	SER56
B	LYS463
B	LYS488
B	LYS496
C	LYS118
C	LYS124
C	LYS187
C	LYS196
C	LYS218
C	LYS262
C	LYS384
F	SER56
C	LYS455
C	LYS463
C	LYS488
C	LYS496
A	LYS196
A	LYS218
A	LYS262
A	LYS384
A	LYS455
A	LYS463

site_id	SWS_FT_FI10
Number of Residues	3
Details	MOD_RES: Omega-N-methylarginine => ECO:0000250\|UniProtKB:Q03265

Chain	Residue	Details
A	ARG161
B	ARG161
C	ARG161

site_id	SWS_FT_FI11
Number of Residues	3
Details	MOD_RES: N6-acetyllysine => ECO:0000250\|UniProtKB:P25705

Chain	Residue	Details
A	LYS391
B	LYS391
C	LYS391

site_id	SWS_FT_FI12
Number of Residues	3
Details	CARBOHYD: O-linked (GlcNAc) serine; alternate => ECO:0000250

Chain	Residue	Details
A	SER33
B	SER33
C	SER33

Catalytic Information from CSA

site_id	CSA1
Number of Residues	1
Details	Annotated By Reference To The Literature 1ohh

Chain	Residue	Details
D	ARG356

site_id	CSA2
Number of Residues	1
Details	Annotated By Reference To The Literature 1ohh

Chain	Residue	Details
E	ARG356

site_id	CSA3
Number of Residues	1
Details	Annotated By Reference To The Literature 1ohh

Chain	Residue	Details
F	ARG356

site_id	CSA4
Number of Residues	4
Details	Annotated By Reference To The Literature 1ohh

Chain	Residue	Details
A	ARG373
D	ARG189
D	GLU188
D	LYS162

site_id	CSA5
Number of Residues	4
Details	Annotated By Reference To The Literature 1ohh

Chain	Residue	Details
B	ARG373
E	ARG189
E	GLU188
E	LYS162

site_id	CSA6
Number of Residues	4
Details	Annotated By Reference To The Literature 1ohh

Chain	Residue	Details
F	ARG189
F	GLU188
F	LYS162
C	ARG373

site_id	CSA7
Number of Residues	3
Details	Annotated By Reference To The Literature 1ohh

Chain	Residue	Details
A	LYS175
A	LYS209
A	GLN208

site_id	CSA8
Number of Residues	3
Details	Annotated By Reference To The Literature 1ohh

Chain	Residue	Details
B	LYS175
B	LYS209
B	GLN208

site_id	CSA9
Number of Residues	3
Details	Annotated By Reference To The Literature 1ohh

Chain	Residue	Details
C	LYS175
C	LYS209
C	GLN208

site_id	MCSA1
Number of Residues	3
Details	M-CSA 178

Chain	Residue	Details
D	LYS162	electrostatic stabiliser
D	GLU188	electrostatic stabiliser
D	ARG189	electrostatic stabiliser

site_id	MCSA2
Number of Residues	3
Details	M-CSA 178

Chain	Residue	Details
E	LYS162	electrostatic stabiliser
E	GLU188	electrostatic stabiliser
E	ARG189	electrostatic stabiliser

site_id	MCSA3
Number of Residues	3
Details	M-CSA 178

Chain	Residue	Details
F	LYS162	electrostatic stabiliser
F	GLU188	electrostatic stabiliser
F	ARG189	electrostatic stabiliser

		Sequence (fasta)
		PDBx/mmCIF
		PDBML format (no-atom)
		PDB format (full)
		Validation report (PDF)
		EDMap 2fo-fc (MTZ)