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1H78

STRUCTURAL BASIS FOR ALLOSTERIC SUBSTRATE SPECIFICITY REGULATION IN CLASS III RIBONUCLEOTIDE REDUCTASES: NRDD IN COMPLEX WITH DCTP.

Functional Information from GO Data
ChainGOidnamespacecontents
A0003824molecular_functioncatalytic activity
A0004748molecular_functionribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor
A0006260biological_processDNA replication
A0008998molecular_functionribonucleoside-triphosphate reductase (thioredoxin) activity
A0009265biological_process2'-deoxyribonucleotide biosynthetic process
A0016491molecular_functionoxidoreductase activity
A0031250cellular_componentanaerobic ribonucleoside-triphosphate reductase complex
A0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues2
DetailsBINDING SITE FOR RESIDUE MG A1590
ChainResidue
ADCP1589
AHOH2096

site_idAC2
Number of Residues12
DetailsBINDING SITE FOR RESIDUE DCP A1588
ChainResidue
AASN447
ALEU448
AARG451
AHOH2093
AHOH2095
AHIS64
AHIS66
AASP67
ATHR443
APRO444
AALA445
AGLU446

site_idAC3
Number of Residues15
DetailsBINDING SITE FOR RESIDUE DCP A1589
ChainResidue
AILE99
AGLU100
ALYS103
AVAL107
AILE111
AGLN114
ALYS146
AASP173
AGLN176
AALA177
ATYR180
AMG1590
AHOH2019
AHOH2029
AHOH2096

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues6
DetailsBINDING: BINDING => ECO:0000269|PubMed:12655046, ECO:0007744|PDB:1HK8
ChainResidueDetails
AHIS64
AHIS66
AASP67
ALYS103
AASN447
ALEU448

site_idSWS_FT_FI2
Number of Residues3
DetailsBINDING: BINDING => ECO:0000269|PubMed:11587648, ECO:0007744|PDB:1H79
ChainResidueDetails
AGLU100
AGLN114
ALYS146

site_idSWS_FT_FI3
Number of Residues1
DetailsBINDING: BINDING => ECO:0000269|PubMed:11587648, ECO:0007744|PDB:1H78
ChainResidueDetails
AALA445

site_idSWS_FT_FI4
Number of Residues4
DetailsBINDING: BINDING => ECO:0000269|PubMed:12655046, ECO:0000305|PubMed:11587648, ECO:0007744|PDB:1HK8
ChainResidueDetails
ACYS543
ACYS546
ACYS561
ACYS564

site_idSWS_FT_FI5
Number of Residues1
DetailsMOD_RES: Glycine radical => ECO:0000269|PubMed:8702830
ChainResidueDetails
AALA580

Catalytic Information from CSA
site_idCSA1
Number of Residues5
DetailsAnnotated By Reference To The Literature 1h7a
ChainResidueDetails
AASN311
AALA580
ACYS79
ACYS290
AGLU446

site_idMCSA1
Number of Residues9
DetailsM-CSA 416
ChainResidueDetails
AASN78activator, electrostatic stabiliser
ACYS79hydrogen radical relay
AMET288radical stabiliser
ACYS290hydrogen radical relay
ASER292electrostatic stabiliser
AASN311electrostatic stabiliser
ATYR441electrostatic stabiliser
AGLU446electrostatic stabiliser
AALA580hydrogen radical relay

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PDB entries from 2024-10-30

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